RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Gm17606F6ZL36 78 aa10.32□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Gm20661K7N787 53 aa10.32□□□□□ -0.76
Col2a1-201ENSMUST00000023123 AI606181Q8C7B9 129 aa10.32□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Gm12216A0A1W2P827 62 aa10.31□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Coa5Q99M07 74 aa10.31□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Prol1E9PYQ4 312 aa10.31□□□□□ -0.76
Col2a1-201ENSMUST00000023123 A930002H24RikQ8C8Y3 163 aa10.3□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Gm10999F6Q4M4 69 aa10.29□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Snhg11Q4G0K9 87 aa10.29□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Defb50Q6TU36 73 aa10.29□□□□□ -0.76
Col2a1-201ENSMUST00000023123 Unc79Q0KK59 2596 aa10.26□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Gm10837Q3UTT8 145 aa10.26□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Usp34Q6ZQ93 3582 aa10.25□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Myo18bE9PV66 2605 aa10.25□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Phxr4P15974 95 aa10.24□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Rpl37aP61514 92 aa10.24□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Q8BT88 171 aa10.24□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Epg5Q80TA9 2572 aa10.23□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Prune2Q52KR3 3084 aa10.23□□□□□ -0.77
Col2a1-201ENSMUST00000023123 1810062G17RikG3X8Y2 129 aa10.23□□□□□ -0.77
Col2a1-201ENSMUST00000023123 4930507D05RikQ8C9C9 103 aa10.23□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Gm5617Q91VN2 117 aa10.22□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Cep192E9Q4Y4 2514 aaKnown RBP10.22□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Phf5aP83870 110 aaKnown RBP10.21□□□□□ -0.77
Col2a1-201ENSMUST00000023123 Krtap24-1G3X9A2 248 aa10.21□□□□□ -0.77
Col2a1-201ENSMUST00000023123 AY074887Q8R5F9 132 aa10.21□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Znf414Q9DCK4 299 aa10.21□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Gm7173A0A0G2JEB6 3132 aa10.2□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Gm10643Q3URG9 111 aa10.18□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Gm27235Q3UW50 83 aa10.17□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Sprr1bQ62267 153 aa10.17□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Sprr4Q8CGN8 76 aa10.16□□□□□ -0.78
Col2a1-201ENSMUST00000023123 Gpr15lA0A0B4J1N3 78 aa10.13□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Krtap11-1E9Q2E9 183 aa10.13□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Mki67E9PVX6 3177 aaKnown RBP10.13□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Usp9yF8VPU6 2556 aa10.12□□□□□ -0.79
Col2a1-201ENSMUST00000023123 HttP42859 3119 aa10.12□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Tnrc18Q80WC3 2878 aa10.11□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Nbeal1E9PYP2 2688 aa10.11□□□□□ -0.79
Col2a1-201ENSMUST00000023123 FlnbQ80X90 2602 aaKnown RBP10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Uqcr11Q9CPX8 56 aa10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Q8BGJ3 129 aa10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Gm7276Q3TYW4 209 aa10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Fam168bQ80XQ8 194 aa10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Spaca4Q80ZQ0 127 aa10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 AplnQ9R0R4 77 aa10.1□□□□□ -0.79
Col2a1-201ENSMUST00000023123 A330070K13RikQ8CA53 115 aa10.09□□□□□ -0.79
Col2a1-201ENSMUST00000023123 Mp68P56379 58 aa10.07□□□□□ -0.8
Col2a1-201ENSMUST00000023123 Defb1P56386 69 aa10.06□□□□□ -0.8
Col2a1-201ENSMUST00000023123 Col12a1Q60847 3120 aa10.04□□□□□ -0.8
Col2a1-201ENSMUST00000023123 Myo15bI7HPW8 3033 aa10.04□□□□□ -0.8
Col2a1-201ENSMUST00000023123 C530025M09RikF6RGA8 229 aa10.03□□□□□ -0.8
Col2a1-201ENSMUST00000023123 Lypd5Q9D7Z7 256 aa10.03□□□□□ -0.8
Col2a1-201ENSMUST00000023123 Gm11213A0A1B0GR83 88 aa10.02□□□□□ -0.81
Col2a1-201ENSMUST00000023123 Chd7A2AJK6 2986 aaKnown RBP10.01□□□□□ -0.81
Col2a1-201ENSMUST00000023123 Ankrd11E9Q4F7 2643 aa10□□□□□ -0.81
Col2a1-201ENSMUST00000023123 Jbts17Q8CE72 3214 aa10□□□□□ -0.81
Col2a1-201ENSMUST00000023123 Itpr1P11881 2749 aa9.97□□□□□ -0.81
Col2a1-201ENSMUST00000023123 CnbpP53996 178 aaKnown RBP9.96□□□□□ -0.81
Col2a1-201ENSMUST00000023123 Fam229bQ8CF36 80 aa9.96□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Gm3250E9Q1M3 230 aa9.95□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Chtf8P0CG14 533 aa9.95□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Phxr5P08399 672 aa9.94□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Defb11Q8R2I7 77 aa9.93□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Hectd1Q69ZR2 2618 aaKnown RBP9.92□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Cypt15B1AXS0 87 aa9.91□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Ankrd17Q99NH0 2603 aaKnown RBP9.91□□□□□ -0.82
Col2a1-201ENSMUST00000023123 Spata3Q9D9T6 193 aa9.9□□□□□ -0.83
Col2a1-201ENSMUST00000023123 CicQ924A2 2510 aa9.89□□□□□ -0.83
Col2a1-201ENSMUST00000023123 Rev3lQ61493 3122 aa9.88□□□□□ -0.83
Col2a1-201ENSMUST00000023123 AW011738F6S7Q2 159 aa9.86□□□□□ -0.83
Col2a1-201ENSMUST00000023123 Fam104aA2A6P4 185 aa9.83□□□□□ -0.84
Col2a1-201ENSMUST00000023123 Defb9Q8R2I6 67 aa9.81□□□□□ -0.84
Col2a1-201ENSMUST00000023123 AtrQ9JKK8 2635 aa9.79□□□□□ -0.84
Col2a1-201ENSMUST00000023123 Cdh23Q99PF4 3354 aa9.78□□□□□ -0.84
Col2a1-201ENSMUST00000023123 FasnP19096 2504 aaKnown RBP9.77□□□□□ -0.84
Col2a1-201ENSMUST00000023123 RetnlbQ99P86 105 aa9.77□□□□□ -0.85
Col2a1-201ENSMUST00000023123 Dmbt1Q60997 2085 aa9.75□□□□□ -0.85
Col2a1-201ENSMUST00000023123 Zcchc13Q9D548 170 aa9.74□□□□□ -0.85
Col2a1-201ENSMUST00000023123 Gm21798J3QNU5 87 aa9.74□□□□□ -0.85
Col2a1-201ENSMUST00000023123 Rnase13Q5GAM7 153 aa9.74□□□□□ -0.85
Col2a1-201ENSMUST00000023123 FlnaQ8BTM8 2647 aaKnown RBP9.73□□□□□ -0.85
Col2a1-201ENSMUST00000023123 2310034C09RikQ9D746 214 aa9.71□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Fn1P11276 2477 aaKnown RBP9.71□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Anapc11Q9CPX9 84 aa9.7□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Fbn2Q61555 2907 aa9.7□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Gcn1E9PVA8 2671 aaKnown RBP9.69□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Gm26620Q9CY65 116 aa9.69□□□□□ -0.86
Col2a1-201ENSMUST00000023123 KalrnA2CG49 2964 aa9.68□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Gm10320E9PW43 113 aa9.68□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Dmxl1Q6PNC0 3013 aa9.67□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Smim29Q8R043 75 aa9.67□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Usp24B1AY13 2617 aaKnown RBP9.66□□□□□ -0.86
Col2a1-201ENSMUST00000023123 Cystm1Q8K353 104 aa9.65□□□□□ -0.86
Col2a1-201ENSMUST00000023123 MgaA2AWL7 3003 aaKnown RBP9.63□□□□□ -0.87
Col2a1-201ENSMUST00000023123 Cypt14J3QPF7 87 aa9.63□□□□□ -0.87
Col2a1-201ENSMUST00000023123 AtmQ62388 3066 aa9.63□□□□□ -0.87
Col2a1-201ENSMUST00000023123 Lelp1Q9DAE3 120 aa9.61□□□□□ -0.87
Col2a1-201ENSMUST00000023123 Bod1lE9Q6J5 3032 aa9.61□□□□□ -0.87
Col2a1-201ENSMUST00000023123 Cfap54Q8C6S9 3106 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 44.6 ms