RNA–Protein interactions for RNA: ENSMUST00000021135.4

Ncbp3-201, Transcript of Nuclear cap-binding protein subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncbp3, Length 12,106 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp3-201ENSMUST00000021135 Col4a5Q63ZW6 1691 aa6.15□□□□□ -1.43
Ncbp3-201ENSMUST00000021135 Gm3646F6S692 53 aa6.14□□□□□ -1.43
Ncbp3-201ENSMUST00000021135 Gm9955Q8CEJ8 102 aa6.14□□□□□ -1.43
Ncbp3-201ENSMUST00000021135 2310034C09RikQ9D746 214 aa6.14□□□□□ -1.43
Ncbp3-201ENSMUST00000021135 Fam168bQ80XQ8 194 aa6.14□□□□□ -1.43
Ncbp3-201ENSMUST00000021135 Prr9Q8BV84 116 aa6.13□□□□□ -1.43
Ncbp3-201ENSMUST00000021135 E130208F15RikQ3UPV3 143 aa6.13□□□□□ -1.43
Ncbp3-201ENSMUST00000021135 Lypd5Q9D7Z7 256 aa6.11□□□□□ -1.43
Ncbp3-201ENSMUST00000021135 1700042G07RikB1AUF7 90 aa6.11□□□□□ -1.43
Ncbp3-201ENSMUST00000021135 Spata3Q9D9T6 193 aa6.1□□□□□ -1.43
Ncbp3-201ENSMUST00000021135 Lce6aD3YV94 81 aa6.09□□□□□ -1.43
Ncbp3-201ENSMUST00000021135 Snhg11Q4G0K9 87 aa6.09□□□□□ -1.43
Ncbp3-201ENSMUST00000021135 Ttc28Q80XJ3 2450 aa6.09□□□□□ -1.43
Ncbp3-201ENSMUST00000021135 AY074887Q8R5F9 132 aa6.08□□□□□ -1.44
Ncbp3-201ENSMUST00000021135 Notch2O35516 2470 aa6.08□□□□□ -1.44
Ncbp3-201ENSMUST00000021135 Psors1c2Q80ZC9 134 aa6.07□□□□□ -1.44
Ncbp3-201ENSMUST00000021135 Lrrk2Q5S006 2527 aa6.06□□□□□ -1.44
Ncbp3-201ENSMUST00000021135 Gm10772F7AIG4 85 aa6.06□□□□□ -1.44
Ncbp3-201ENSMUST00000021135 Camk2n1Q6QWF9 78 aa6.05□□□□□ -1.44
Ncbp3-201ENSMUST00000021135 Tln1P26039 2541 aaKnown RBP6.05□□□□□ -1.44
Ncbp3-201ENSMUST00000021135 Gm16181B0V2H2 73 aa6.04□□□□□ -1.44
Ncbp3-201ENSMUST00000021135 Gm4491E0CX42 125 aa6.04□□□□□ -1.44
Ncbp3-201ENSMUST00000021135 Igf2rQ07113 2483 aaKnown RBP6.04□□□□□ -1.44
Ncbp3-201ENSMUST00000021135 Smim29Q8R043 75 aa6.03□□□□□ -1.44
Ncbp3-201ENSMUST00000021135 Epg5Q80TA9 2572 aa6.03□□□□□ -1.44
Ncbp3-201ENSMUST00000021135 Srsf12Q8C8K3 266 aa6.02□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 Setd2E9Q5F9 2537 aa6.01□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 Zfyve26Q5DU37 2529 aa6.01□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 Defb2P82020 71 aa6□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 Sptbn4E9PX29 2561 aa6□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 Sprr4Q8CGN8 76 aa6□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 6030445D17RikE9Q8F9 148 aa6□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 Spink7Q6IE32 76 aa6□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 Krtap11-1E9Q2E9 183 aa6□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 Col27a1Q5QNQ9 1845 aa5.99□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 Gm9573F7C950 1606 aa5.98□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 Sec61bQ9CQS8 96 aaKnown RBP5.98□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 Defb10Q8R2I8 73 aa5.97□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 Romo1P60603 79 aa5.96□□□□□ -1.45
Ncbp3-201ENSMUST00000021135 Cep192E9Q4Y4 2514 aaKnown RBP5.95□□□□□ -1.46
Ncbp3-201ENSMUST00000021135 Zcchc13Q9D548 170 aa5.94□□□□□ -1.46
Ncbp3-201ENSMUST00000021135 Nbeal1E9PYP2 2688 aa5.94□□□□□ -1.46
Ncbp3-201ENSMUST00000021135 Ptpn13Q64512 2453 aa5.94□□□□□ -1.46
Ncbp3-201ENSMUST00000021135 Cystm1Q8K353 104 aa5.93□□□□□ -1.46
Ncbp3-201ENSMUST00000021135 Anapc11Q9CPX9 84 aa5.92□□□□□ -1.46
Ncbp3-201ENSMUST00000021135 Piezo2Q8CD54 2822 aa5.92□□□□□ -1.46
Ncbp3-201ENSMUST00000021135 4933415A04RikQ9D443 101 aa5.92□□□□□ -1.46
Ncbp3-201ENSMUST00000021135 Sprr1bQ62267 153 aa5.91□□□□□ -1.46
Ncbp3-201ENSMUST00000021135 Odf3bQ5M8M2 238 aa5.91□□□□□ -1.46
Ncbp3-201ENSMUST00000021135 Defb9Q8R2I6 67 aa5.89□□□□□ -1.47
Ncbp3-201ENSMUST00000021135 Ndufaf8A2AMZ4 74 aa5.88□□□□□ -1.47
Ncbp3-201ENSMUST00000021135 Fam229aB2KGE5 128 aa5.87□□□□□ -1.47
Ncbp3-201ENSMUST00000021135 Gm10382Q3V0T5 144 aa5.86□□□□□ -1.47
Ncbp3-201ENSMUST00000021135 Krtap26-1Q9D7N2 215 aa5.86□□□□□ -1.47
Ncbp3-201ENSMUST00000021135 Gm9112A2AI92 75 aa5.86□□□□□ -1.47
Ncbp3-201ENSMUST00000021135 HrnrQ8VHD8 2496 aa5.85□□□□□ -1.47
Ncbp3-201ENSMUST00000021135 Gm37013Q8K491 104 aa5.85□□□□□ -1.47
Ncbp3-201ENSMUST00000021135 Gm10320E9PW43 113 aa5.84□□□□□ -1.47
Ncbp3-201ENSMUST00000021135 Rpl37Q9D823 97 aa5.84□□□□□ -1.47
Ncbp3-201ENSMUST00000021135 Usp9xP70398 2559 aaKnown RBP5.84□□□□□ -1.47
Ncbp3-201ENSMUST00000021135 Fam104aA2A6P4 185 aa5.83□□□□□ -1.48
Ncbp3-201ENSMUST00000021135 SrcapA0A087WQ44 3271 aa5.82□□□□□ -1.48
Ncbp3-201ENSMUST00000021135 Col4a4Q9QZR9 1682 aa5.81□□□□□ -1.48
Ncbp3-201ENSMUST00000021135 Chd8Q09XV5 2582 aaKnown RBP5.8□□□□□ -1.48
Ncbp3-201ENSMUST00000021135 MtorQ9JLN9 2549 aa5.79□□□□□ -1.48
Ncbp3-201ENSMUST00000021135 Defb11Q8R2I7 77 aa5.78□□□□□ -1.48
Ncbp3-201ENSMUST00000021135 Kmt2bO08550 2713 aa5.78□□□□□ -1.48
Ncbp3-201ENSMUST00000021135 Krtap24-1G3X9A2 248 aa5.77□□□□□ -1.49
Ncbp3-201ENSMUST00000021135 Piezo1E2JF22 2547 aa5.76□□□□□ -1.49
Ncbp3-201ENSMUST00000021135 SmcpP15265 143 aa5.72□□□□□ -1.49
Ncbp3-201ENSMUST00000021135 Col4a2P08122 1707 aa5.69□□□□□ -1.5
Ncbp3-201ENSMUST00000021135 Usp9yF8VPU6 2556 aa5.68□□□□□ -1.5
Ncbp3-201ENSMUST00000021135 Gm21887J3QQ04 176 aa5.68□□□□□ -1.5
Ncbp3-201ENSMUST00000021135 Gm19426M0QWC7 77 aa5.68□□□□□ -1.5
Ncbp3-201ENSMUST00000021135 AW011738F6S7Q2 159 aa5.67□□□□□ -1.5
Ncbp3-201ENSMUST00000021135 Plac8Q9JI48 112 aa5.66□□□□□ -1.5
Ncbp3-201ENSMUST00000021135 Golgb1E9PVZ8 3238 aa5.65□□□□□ -1.5
Ncbp3-201ENSMUST00000021135 A730071L15RikQ8C4X0 137 aa5.63□□□□□ -1.51
Ncbp3-201ENSMUST00000021135 Usp24B1AY13 2617 aaKnown RBP5.62□□□□□ -1.51
Ncbp3-201ENSMUST00000021135 Gm3250E9Q1M3 230 aa5.6□□□□□ -1.51
Ncbp3-201ENSMUST00000021135 Cox6b2Q80ZN9 88 aa5.59□□□□□ -1.51
Ncbp3-201ENSMUST00000021135 Gm17349F7BGH6 99 aa5.59□□□□□ -1.51
Ncbp3-201ENSMUST00000021135 2310050C09RikG5E8Z3 280 aa5.59□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 Krtap15-1Q9QZU5 150 aa5.58□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 SetxA2AKX3 2646 aa5.58□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 NbdyA0A0N4SUI7 68 aa5.58□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 FasnP19096 2504 aaKnown RBP5.57□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 TrrapQ80YV3 2565 aaKnown RBP5.57□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 Ankrd17Q99NH0 2603 aaKnown RBP5.57□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 Gm10139O88245 57 aa5.56□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 Prm2P07978 107 aa5.55□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 BC029722A0A0N4SW31 51 aa5.54□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 Jbts17Q8CE72 3214 aa5.53□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 Fn1P11276 2477 aaKnown RBP5.53□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 Nsd1O88491 2588 aaKnown RBP5.53□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 Abca12E9Q876 2595 aa5.53□□□□□ -1.52
Ncbp3-201ENSMUST00000021135 Krtap14O08640 167 aa5.52□□□□□ -1.53
Ncbp3-201ENSMUST00000021135 Unc79Q0KK59 2596 aa5.52□□□□□ -1.53
Ncbp3-201ENSMUST00000021135 Gm10065F6TJM2 114 aa5.51□□□□□ -1.53
Ncbp3-201ENSMUST00000021135 Gm16253D3Z167 63 aa5.51□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 178 ms