RNA–Protein interactions for RNA: ENSMUST00000021135.4

Ncbp3-201, Transcript of Nuclear cap-binding protein subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncbp3, Length 12,106 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp3-201ENSMUST00000021135 Las1lA2BE28 776 aaKnown RBP15.42■□□□□ 0.06
Ncbp3-201ENSMUST00000021135 Cngb1E1AZ71 1325 aa15.41■□□□□ 0.06
Ncbp3-201ENSMUST00000021135 Rpgrip1Q9EPQ2 1331 aa15.33■□□□□ 0.05
Ncbp3-201ENSMUST00000021135 Rhox8Q6VSS7 320 aa15.19■□□□□ 0.02
Ncbp3-201ENSMUST00000021135 Pelp1Q9DBD5 1123 aaKnown RBP15.13■□□□□ 0.01
Ncbp3-201ENSMUST00000021135 Amer1Q7TS75 1132 aa15.03■□□□□ -0
Ncbp3-201ENSMUST00000021135 Ehmt2Q9Z148 1263 aaKnown RBP14.55□□□□□ -0.08
Ncbp3-201ENSMUST00000021135 CenpbP27790 599 aa14.55□□□□□ -0.08
Ncbp3-201ENSMUST00000021135 4930567H17RikQ3V0K5 233 aa14.51□□□□□ -0.09
Ncbp3-201ENSMUST00000021135 Wdr66E9Q743 1299 aa14.48□□□□□ -0.09
Ncbp3-201ENSMUST00000021135 Myt1Q8CFC2 1127 aa14.32□□□□□ -0.12
Ncbp3-201ENSMUST00000021135 Ttbk1Q6PCN3 1308 aa14.29□□□□□ -0.12
Ncbp3-201ENSMUST00000021135 Zeb1Q64318 1117 aa14.29□□□□□ -0.12
Ncbp3-201ENSMUST00000021135 DiexfQ8BTT6 772 aaKnown RBP14.06□□□□□ -0.16
Ncbp3-201ENSMUST00000021135 4933416C03RikQ3V063 378 aa14.03□□□□□ -0.16
Ncbp3-201ENSMUST00000021135 Ube2uB1AUC4 352 aa13.81□□□□□ -0.2
Ncbp3-201ENSMUST00000021135 Stra8P70278 393 aa13.79□□□□□ -0.2
Ncbp3-201ENSMUST00000021135 Slc24a1Q91WD8 1130 aa13.66□□□□□ -0.22
Ncbp3-201ENSMUST00000021135 Acin1Q9JIX8 1338 aaKnown RBP13.65□□□□□ -0.22
Ncbp3-201ENSMUST00000021135 Rtl5Q5DTT4 599 aa13.6□□□□□ -0.23
Ncbp3-201ENSMUST00000021135 Cdk11bP24788 784 aaKnown RBP13.59□□□□□ -0.23
Ncbp3-201ENSMUST00000021135 Pcgf6Q99NA9 353 aa13.52□□□□□ -0.24
Ncbp3-201ENSMUST00000021135 Tnnt3Q9QZ47 272 aa13.48□□□□□ -0.25
Ncbp3-201ENSMUST00000021135 NefmP08553 848 aa13.46□□□□□ -0.26
Ncbp3-201ENSMUST00000021135 Ythdc1E9Q5K9 736 aaKnown RBP13.46□□□□□ -0.26
Ncbp3-201ENSMUST00000021135 HrcG5E8J6 738 aa13.35□□□□□ -0.27
Ncbp3-201ENSMUST00000021135 NeflP08551 543 aa13.35□□□□□ -0.27
Ncbp3-201ENSMUST00000021135 Gab3Q8BSM5 595 aa13.33□□□□□ -0.28
Ncbp3-201ENSMUST00000021135 Nop58Q6DFW4 536 aaKnown RBP13.32□□□□□ -0.28
Ncbp3-201ENSMUST00000021135 DaxxO35613 739 aa13.31□□□□□ -0.28
Ncbp3-201ENSMUST00000021135 Eif5bQ05D44 1216 aaKnown RBP13.26□□□□□ -0.29
Ncbp3-201ENSMUST00000021135 Ccdc136Q3TVA9 1136 aa13.25□□□□□ -0.29
Ncbp3-201ENSMUST00000021135 Esf1Q3V1V3 845 aaKnown RBP13.21□□□□□ -0.29
Ncbp3-201ENSMUST00000021135 NrdcQ8BHG1 1161 aa13.19□□□□□ -0.3
Ncbp3-201ENSMUST00000021135 Npm2Q80W85 207 aa13.18□□□□□ -0.3
Ncbp3-201ENSMUST00000021135 CatipB9EKE5 520 aa13.15□□□□□ -0.3
Ncbp3-201ENSMUST00000021135 Myt1lP97500 1187 aa13.15□□□□□ -0.3
Ncbp3-201ENSMUST00000021135 UbtfP25976 765 aaKnown RBP13.14□□□□□ -0.31
Ncbp3-201ENSMUST00000021135 Anp32aO35381 247 aa13.1□□□□□ -0.31
Ncbp3-201ENSMUST00000021135 Supt5hO55201 1082 aaKnown RBP13.1□□□□□ -0.31
Ncbp3-201ENSMUST00000021135 Lmod3E9QA62 571 aa13.05□□□□□ -0.32
Ncbp3-201ENSMUST00000021135 Anp32bQ9EST5 272 aaKnown RBP13.03□□□□□ -0.32
Ncbp3-201ENSMUST00000021135 Trim41Q5NCC3 630 aa13.01□□□□□ -0.33
Ncbp3-201ENSMUST00000021135 Ppargc1bQ8VHJ7 1014 aa12.99□□□□□ -0.33
Ncbp3-201ENSMUST00000021135 NclP09405 707 aaKnown RBP12.9□□□□□ -0.34
Ncbp3-201ENSMUST00000021135 Gm38655A0A286YDK6 273 aa12.88□□□□□ -0.35
Ncbp3-201ENSMUST00000021135 Csrnp3P59055 597 aa12.85□□□□□ -0.35
Ncbp3-201ENSMUST00000021135 Ccdc9Q8VC31 543 aaKnown RBP12.83□□□□□ -0.36
Ncbp3-201ENSMUST00000021135 Neurod1Q60867 357 aa12.82□□□□□ -0.36
Ncbp3-201ENSMUST00000021135 Upf2A2AT37 1269 aaKnown RBP12.8□□□□□ -0.36
Ncbp3-201ENSMUST00000021135 Bcl11aQ9QYE3 773 aa12.79□□□□□ -0.36
Ncbp3-201ENSMUST00000021135 Hsp90aa1P07901 733 aaKnown RBP12.78□□□□□ -0.36
Ncbp3-201ENSMUST00000021135 Aplp2Q06335 707 aa12.77□□□□□ -0.36
Ncbp3-201ENSMUST00000021135 ArxO35085 564 aa12.77□□□□□ -0.37
Ncbp3-201ENSMUST00000021135 Ccdc180J3QNE4 1664 aa12.71□□□□□ -0.37
Ncbp3-201ENSMUST00000021135 TonslQ6NZL6 1363 aa12.71□□□□□ -0.37
Ncbp3-201ENSMUST00000021135 Anks4bQ8K3X6 423 aa12.67□□□□□ -0.38
Ncbp3-201ENSMUST00000021135 Trim44Q9QXA7 346 aa12.66□□□□□ -0.38
Ncbp3-201ENSMUST00000021135 ClspnQ80YR7 1315 aa12.59□□□□□ -0.39
Ncbp3-201ENSMUST00000021135 Fam50aQ9WV03 339 aaKnown RBP12.59□□□□□ -0.39
Ncbp3-201ENSMUST00000021135 Os9Q8K2C7 672 aa12.58□□□□□ -0.4
Ncbp3-201ENSMUST00000021135 Tnnt2P50752 301 aa12.58□□□□□ -0.4
Ncbp3-201ENSMUST00000021135 Ppp4r2Q0VGB7 417 aa12.58□□□□□ -0.4
Ncbp3-201ENSMUST00000021135 Rtl1Q7M732 1744 aa12.55□□□□□ -0.4
Ncbp3-201ENSMUST00000021135 DekQ7TNV0 380 aaKnown RBP12.54□□□□□ -0.4
Ncbp3-201ENSMUST00000021135 Znf316Q6PGE4 1016 aa12.52□□□□□ -0.41
Ncbp3-201ENSMUST00000021135 Vsig10D3YX43 558 aa12.5□□□□□ -0.41
Ncbp3-201ENSMUST00000021135 Calr4Q3TQS0 420 aa12.49□□□□□ -0.41
Ncbp3-201ENSMUST00000021135 Fam71e1A1L3C1 212 aa12.47□□□□□ -0.41
Ncbp3-201ENSMUST00000021135 Podxl2Q8CAE9 603 aa12.47□□□□□ -0.41
Ncbp3-201ENSMUST00000021135 Mapk8ip2Q9ERE9 830 aa12.44□□□□□ -0.42
Ncbp3-201ENSMUST00000021135 Irx3P81067 507 aa12.44□□□□□ -0.42
Ncbp3-201ENSMUST00000021135 Znf326O88291 580 aa12.42□□□□□ -0.42
Ncbp3-201ENSMUST00000021135 Polr3glQ8R0C0 218 aa12.41□□□□□ -0.42
Ncbp3-201ENSMUST00000021135 Ccdc27Q3V036 639 aa12.41□□□□□ -0.42
Ncbp3-201ENSMUST00000021135 1700123L14RikQ3V2K7 440 aa12.41□□□□□ -0.42
Ncbp3-201ENSMUST00000021135 Wdr43Q6ZQL4 677 aaKnown RBP12.41□□□□□ -0.42
Ncbp3-201ENSMUST00000021135 Mier1Q5UAK0 511 aa12.4□□□□□ -0.42
Ncbp3-201ENSMUST00000021135 Taok2Q6ZQ29 1240 aa12.39□□□□□ -0.43
Ncbp3-201ENSMUST00000021135 Zbtb7cQ8VCZ7 619 aa12.39□□□□□ -0.43
Ncbp3-201ENSMUST00000021135 Ap3b1Q9Z1T1 1105 aa12.37□□□□□ -0.43
Ncbp3-201ENSMUST00000021135 PtmaP26350 111 aa12.36□□□□□ -0.43
Ncbp3-201ENSMUST00000021135 CanxP35564 591 aaKnown RBP12.33□□□□□ -0.44
Ncbp3-201ENSMUST00000021135 Pknox2Q8BG99 474 aa12.29□□□□□ -0.44
Ncbp3-201ENSMUST00000021135 Nlrp6Q91WS2 869 aa12.29□□□□□ -0.44
Ncbp3-201ENSMUST00000021135 Adam1bQ8R534 806 aa12.28□□□□□ -0.44
Ncbp3-201ENSMUST00000021135 Sall2Q9QX96 1004 aa12.28□□□□□ -0.44
Ncbp3-201ENSMUST00000021135 AU015836B2RUM3 263 aa12.27□□□□□ -0.45
Ncbp3-201ENSMUST00000021135 Htatsf1Q8BGC0 757 aa12.24□□□□□ -0.45
Ncbp3-201ENSMUST00000021135 Hsp90ab1P11499 724 aaKnown RBP12.24□□□□□ -0.45
Ncbp3-201ENSMUST00000021135 Plcb2A3KGF7 1181 aa12.2□□□□□ -0.46
Ncbp3-201ENSMUST00000021135 Chic1Q8CBW7 227 aa12.2□□□□□ -0.46
Ncbp3-201ENSMUST00000021135 Rangap1P46061 589 aaKnown RBP12.2□□□□□ -0.46
Ncbp3-201ENSMUST00000021135 Q8BT18 775 aa12.19□□□□□ -0.46
Ncbp3-201ENSMUST00000021135 Il27Q8K3I6 234 aa12.18□□□□□ -0.46
Ncbp3-201ENSMUST00000021135 Mak16Q8BGS0 296 aaKnown RBP12.18□□□□□ -0.46
Ncbp3-201ENSMUST00000021135 MsnP26041 577 aaKnown RBP12.15□□□□□ -0.46
Ncbp3-201ENSMUST00000021135 Trim30dE9PWL0 497 aa12.15□□□□□ -0.46
Ncbp3-201ENSMUST00000021135 Arid4bA2CG63 1314 aaKnown RBP12.15□□□□□ -0.47
Ncbp3-201ENSMUST00000021135 Zbtb4Q5F293 982 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 110.9 ms