RNA–Protein interactions for RNA: ENSMUST00000005532.8

Nid1-201, Transcript of Nidogen-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nid1, Length 6,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1-201ENSMUST00000005532 BC067074F6RXI4 2391 aa10.13□□□□□ -0.79
Nid1-201ENSMUST00000005532 Sprr4Q8CGN8 76 aa10.12□□□□□ -0.79
Nid1-201ENSMUST00000005532 Hivep2Q3UHF7 2430 aa10.1□□□□□ -0.79
Nid1-201ENSMUST00000005532 Gm11213A0A1B0GR83 88 aa10.07□□□□□ -0.8
Nid1-201ENSMUST00000005532 Gm7276Q3TYW4 209 aa10.07□□□□□ -0.8
Nid1-201ENSMUST00000005532 Notch2O35516 2470 aa10.06□□□□□ -0.8
Nid1-201ENSMUST00000005532 Sprr1bQ62267 153 aa10.06□□□□□ -0.8
Nid1-201ENSMUST00000005532 C530025M09RikF6RGA8 229 aa10.06□□□□□ -0.8
Nid1-201ENSMUST00000005532 Rnase13Q5GAM7 153 aa10.05□□□□□ -0.8
Nid1-201ENSMUST00000005532 RetnlbQ99P86 105 aa10.03□□□□□ -0.8
Nid1-201ENSMUST00000005532 Ankhd1E9PUR0 2548 aaKnown RBP10.02□□□□□ -0.81
Nid1-201ENSMUST00000005532 Fam229bQ8CF36 80 aa10.02□□□□□ -0.81
Nid1-201ENSMUST00000005532 Chtf8P0CG14 533 aa9.98□□□□□ -0.81
Nid1-201ENSMUST00000005532 CnbpP53996 178 aaKnown RBP9.98□□□□□ -0.81
Nid1-201ENSMUST00000005532 Gm3250E9Q1M3 230 aa9.95□□□□□ -0.82
Nid1-201ENSMUST00000005532 Cypt15B1AXS0 87 aa9.94□□□□□ -0.82
Nid1-201ENSMUST00000005532 Pkd1l2Q7TN88 2461 aa9.93□□□□□ -0.82
Nid1-201ENSMUST00000005532 Lypd5Q9D7Z7 256 aa9.92□□□□□ -0.82
Nid1-201ENSMUST00000005532 Gm20538F6Z9R1 75 aa9.91□□□□□ -0.82
Nid1-201ENSMUST00000005532 Nav3Q80TN7 2359 aa9.9□□□□□ -0.82
Nid1-201ENSMUST00000005532 Defb9Q8R2I6 67 aa9.9□□□□□ -0.83
Nid1-201ENSMUST00000005532 Spata3Q9D9T6 193 aa9.89□□□□□ -0.83
Nid1-201ENSMUST00000005532 Gm21798J3QNU5 87 aa9.85□□□□□ -0.83
Nid1-201ENSMUST00000005532 Piezo2Q8CD54 2822 aa9.85□□□□□ -0.83
Nid1-201ENSMUST00000005532 Anapc11Q9CPX9 84 aa9.84□□□□□ -0.83
Nid1-201ENSMUST00000005532 Sptbn4E9PX29 2561 aa9.83□□□□□ -0.84
Nid1-201ENSMUST00000005532 Fam104aA2A6P4 185 aa9.83□□□□□ -0.84
Nid1-201ENSMUST00000005532 CriptO70333 101 aa9.83□□□□□ -0.84
Nid1-201ENSMUST00000005532 Hivep3A2A884 2348 aa9.83□□□□□ -0.84
Nid1-201ENSMUST00000005532 AW011738F6S7Q2 159 aa9.81□□□□□ -0.84
Nid1-201ENSMUST00000005532 2310034C09RikQ9D746 214 aa9.8□□□□□ -0.84
Nid1-201ENSMUST00000005532 Ttc28Q80XJ3 2450 aa9.77□□□□□ -0.85
Nid1-201ENSMUST00000005532 Gm3880A0A1B0GSB3 72 aa9.76□□□□□ -0.85
Nid1-201ENSMUST00000005532 Tln1P26039 2541 aaKnown RBP9.76□□□□□ -0.85
Nid1-201ENSMUST00000005532 Gm26620Q9CY65 116 aa9.74□□□□□ -0.85
Nid1-201ENSMUST00000005532 Zcchc13Q9D548 170 aa9.71□□□□□ -0.85
Nid1-201ENSMUST00000005532 Smim29Q8R043 75 aa9.71□□□□□ -0.86
Nid1-201ENSMUST00000005532 Plac8Q9JI48 112 aa9.69□□□□□ -0.86
Nid1-201ENSMUST00000005532 Pla2g10Q9QXX3 151 aa9.68□□□□□ -0.86
Nid1-201ENSMUST00000005532 Zfp462B1AWL2 2495 aaKnown RBP9.68□□□□□ -0.86
Nid1-201ENSMUST00000005532 Gm9955Q8CEJ8 102 aa9.68□□□□□ -0.86
Nid1-201ENSMUST00000005532 6030445D17RikE9Q8F9 148 aa9.68□□□□□ -0.86
Nid1-201ENSMUST00000005532 Cep192E9Q4Y4 2514 aaKnown RBP9.67□□□□□ -0.86
Nid1-201ENSMUST00000005532 SrcapA0A087WQ44 3271 aa9.67□□□□□ -0.86
Nid1-201ENSMUST00000005532 Cypt14J3QPF7 87 aa9.66□□□□□ -0.86
Nid1-201ENSMUST00000005532 Gm10320E9PW43 113 aa9.64□□□□□ -0.87
Nid1-201ENSMUST00000005532 Cystm1Q8K353 104 aa9.62□□□□□ -0.87
Nid1-201ENSMUST00000005532 TrrapQ80YV3 2565 aaKnown RBP9.61□□□□□ -0.87
Nid1-201ENSMUST00000005532 Ptpn13Q64512 2453 aa9.6□□□□□ -0.87
Nid1-201ENSMUST00000005532 PtprqP0C5E4 2300 aa9.57□□□□□ -0.88
Nid1-201ENSMUST00000005532 Gm4491E0CX42 125 aa9.55□□□□□ -0.88
Nid1-201ENSMUST00000005532 Gm3233E9Q2H5 230 aa9.54□□□□□ -0.88
Nid1-201ENSMUST00000005532 NbdyA0A0N4SUI7 68 aa9.52□□□□□ -0.89
Nid1-201ENSMUST00000005532 Usp9xP70398 2559 aaKnown RBP9.51□□□□□ -0.89
Nid1-201ENSMUST00000005532 Gm3646F6S692 53 aa9.51□□□□□ -0.89
Nid1-201ENSMUST00000005532 OxtP35454 125 aa9.49□□□□□ -0.89
Nid1-201ENSMUST00000005532 Gm10139O88245 57 aa9.44□□□□□ -0.9
Nid1-201ENSMUST00000005532 Gm10065F6TJM2 114 aa9.43□□□□□ -0.9
Nid1-201ENSMUST00000005532 SetxA2AKX3 2646 aa9.42□□□□□ -0.9
Nid1-201ENSMUST00000005532 Dmbt1Q60997 2085 aa9.42□□□□□ -0.9
Nid1-201ENSMUST00000005532 Gm9821Q8K076 103 aa9.41□□□□□ -0.9
Nid1-201ENSMUST00000005532 Gm37013Q8K491 104 aa9.4□□□□□ -0.9
Nid1-201ENSMUST00000005532 Spink7Q6IE32 76 aa9.4□□□□□ -0.9
Nid1-201ENSMUST00000005532 Odf3bQ5M8M2 238 aa9.39□□□□□ -0.91
Nid1-201ENSMUST00000005532 Gm7138L7N2C3 230 aa9.38□□□□□ -0.91
Nid1-201ENSMUST00000005532 Gm3238W4VSP7 230 aa9.38□□□□□ -0.91
Nid1-201ENSMUST00000005532 PolqQ8CGS6 2544 aa9.36□□□□□ -0.91
Nid1-201ENSMUST00000005532 A730071L15RikQ8C4X0 137 aa9.36□□□□□ -0.91
Nid1-201ENSMUST00000005532 Lelp1Q9DAE3 120 aa9.32□□□□□ -0.92
Nid1-201ENSMUST00000005532 Setd2E9Q5F9 2537 aa9.31□□□□□ -0.92
Nid1-201ENSMUST00000005532 Sprr1aQ62266 144 aa9.3□□□□□ -0.92
Nid1-201ENSMUST00000005532 Epg5Q80TA9 2572 aa9.27□□□□□ -0.93
Nid1-201ENSMUST00000005532 4933415A04RikQ9D443 101 aa9.27□□□□□ -0.93
Nid1-201ENSMUST00000005532 1700042G07RikB1AUF7 90 aa9.25□□□□□ -0.93
Nid1-201ENSMUST00000005532 Gm16253D3Z167 63 aa9.23□□□□□ -0.93
Nid1-201ENSMUST00000005532 CicQ924A2 2510 aa9.22□□□□□ -0.93
Nid1-201ENSMUST00000005532 Gm11565A2A4M7 156 aa9.22□□□□□ -0.93
Nid1-201ENSMUST00000005532 Romo1P60603 79 aa9.22□□□□□ -0.93
Nid1-201ENSMUST00000005532 MtorQ9JLN9 2549 aa9.2□□□□□ -0.94
Nid1-201ENSMUST00000005532 Gm9508A0A1W2P7W0 230 aa9.2□□□□□ -0.94
Nid1-201ENSMUST00000005532 Camk2n1Q6QWF9 78 aa9.2□□□□□ -0.94
Nid1-201ENSMUST00000005532 Bahcc1Q3UHR0 2643 aa9.2□□□□□ -0.94
Nid1-201ENSMUST00000005532 Krtap15-1Q9QZU5 150 aa9.2□□□□□ -0.94
Nid1-201ENSMUST00000005532 Gm7137J3QMW1 236 aa9.19□□□□□ -0.94
Nid1-201ENSMUST00000005532 Rpl37Q9D823 97 aa9.16□□□□□ -0.94
Nid1-201ENSMUST00000005532 FlnbQ80X90 2602 aaKnown RBP9.15□□□□□ -0.94
Nid1-201ENSMUST00000005532 Nbeal1E9PYP2 2688 aa9.13□□□□□ -0.95
Nid1-201ENSMUST00000005532 Ankrd17Q99NH0 2603 aaKnown RBP9.12□□□□□ -0.95
Nid1-201ENSMUST00000005532 Unc79Q0KK59 2596 aa9.12□□□□□ -0.95
Nid1-201ENSMUST00000005532 SmcpP15265 143 aa9.11□□□□□ -0.95
Nid1-201ENSMUST00000005532 CenpfE9Q3P4 2997 aaKnown RBP9.07□□□□□ -0.96
Nid1-201ENSMUST00000005532 Gm10382Q3V0T5 144 aa9.05□□□□□ -0.96
Nid1-201ENSMUST00000005532 Abca12E9Q876 2595 aa9.04□□□□□ -0.96
Nid1-201ENSMUST00000005532 Usp9yF8VPU6 2556 aa9.01□□□□□ -0.97
Nid1-201ENSMUST00000005532 Krtap29-1A2A5X4 342 aa9□□□□□ -0.97
Nid1-201ENSMUST00000005532 Fam229aB2KGE5 128 aa8.98□□□□□ -0.97
Nid1-201ENSMUST00000005532 Gm17349F7BGH6 99 aa8.96□□□□□ -0.98
Nid1-201ENSMUST00000005532 Nsd1O88491 2588 aaKnown RBP8.95□□□□□ -0.98
Nid1-201ENSMUST00000005532 Gm2310J3QNJ2 377 aa8.93□□□□□ -0.98
Nid1-201ENSMUST00000005532 Gm5767A0A0J9YTU8 78 aa8.92□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms