RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Col4a6B1AVK5 1691 aa5.44□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Gm26602M0QWA4 95 aa5.44□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Snai3Q9QY31 287 aa5.44□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Krtap24-1G3X9A2 248 aa5.44□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 AW011738F6S7Q2 159 aa5.44□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 CrygaP04345 174 aa5.44□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Gm17689B3GLJ4 109 aa5.44□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 OtoglF7A4A7 2325 aa5.43□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Gm20604F8WIA3 75 aa5.43□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Pde6gP09174 87 aa5.43□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Spint4Q9D263 159 aa5.43□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Znf580Q9DB38 172 aa5.43□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Krtap26-1Q9D7N2 215 aa5.42□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Nup210lQ9D2F7 1881 aa5.41□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Adamtsl3G3UXC7 1706 aa5.41□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Tet2Q4JK59 1912 aaKnown RBP5.4□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Ndufa4l2Q4FZG9 87 aa5.4□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 LenepQ9WVB6 61 aa5.4□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Ighv1-75A0A075B5Y2 117 aa5.39□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Krtap10-4Q08EG8 221 aa5.39□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 4930507D05RikQ8C9C9 103 aa5.39□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 ThadaA8C756 1938 aa5.39□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Defb9Q8R2I6 67 aa5.38□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Kif26aQ52KG5 1881 aa5.38□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Gm5878E9PUB3 99 aa5.38□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Eif4ebp1Q60876 117 aa5.38□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Gm10549Q3URY4 149 aa5.38□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Sprr2jO70561 109 aa5.38□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Atg2aQ6P4T0 1914 aa5.37□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 NbasE9Q411 2356 aa5.37□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Gm36176A0A1W2P8D5 158 aa5.37□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Chchd7Q8K2Q5 85 aa5.37□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Gm10160F6Y577 67 aa5.37□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 E130208F15RikQ3UPV3 143 aa5.36□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 CriptO70333 101 aa5.36□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Cdc42se1Q8BHL7 80 aa5.35□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Gm9507D3Z5T3 223 aa5.35□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Msrb1Q9JLC3 116 aa5.35□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Gm3880A0A1B0GSB3 72 aa5.35□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Col5a1O88207 1838 aa5.35□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Znf239P24399 201 aa5.34□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Carhsp1Q9CR86 148 aa5.34□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Jbts17Q8CE72 3214 aa5.34□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Krtap10-10A0A1W2P7T6 217 aa5.34□□□□□ -1.55
Rc3h1-202ENSMUST00000161609 Myo9aQ8C170 2542 aa5.34□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Cd27P41272 250 aa5.34□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Camk2n1Q6QWF9 78 aa5.34□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Ndufc1Q9CQY9 76 aa5.34□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Gm16181B0V2H2 73 aa5.33□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Gm10509O88255 85 aa5.33□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Cox7cP17665 63 aa5.33□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 PtprqP0C5E4 2300 aa5.33□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 4930432M17RikQ3V0W9 174 aa5.33□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Q8BT88 171 aa5.32□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Gm10197F6QEY5 67 aa5.32□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Anapc1P53995 1944 aaKnown RBP5.31□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Kiaa1549Q68FD9 1940 aa5.31□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Odf3l2Q3TZ65 277 aa5.3□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Rif1Q6PR54 2419 aaKnown RBP5.3□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Fgfbp3Q1HCM0 245 aa5.3□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 PtprbB2RU80 1998 aa5.3□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Fam19a3Q7TPG6 132 aa5.29□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Col24a1Q30D77 1733 aa5.29□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Adamts20P59511 1906 aa5.29□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Pcdh15Q99PJ1 1943 aa5.29□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 MgamB5THE2 1827 aa5.29□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Krtap11-1E9Q2E9 183 aa5.29□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 BC067074F6RXI4 2391 aa5.28□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Cspg4Q8VHY0 2327 aa5.28□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 4930524J08RikQ9CUJ5 163 aa5.28□□□□□ -1.56
Rc3h1-202ENSMUST00000161609 Fam229aB2KGE5 128 aa5.27□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 Notch2O35516 2470 aa5.27□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 Col4a5Q63ZW6 1691 aa5.27□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 A330070K13RikQ8CA53 115 aa5.25□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 Gm28539A0A087WSL9 92 aa5.25□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 P0C913 63 aa5.25□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 Dennd4cA6H8H2 1906 aa5.24□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 Gm10770F7D043 238 aa5.24□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 AcacbE9Q4Z2 2448 aa5.24□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 Prr9Q8BV84 116 aa5.23□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 Dmac1Q9CQ00 111 aa5.23□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 Spink13Q3UTS8 97 aa5.23□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 AI854703Q8BIN3 203 aa5.23□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 Gm21060J3KMU4 56 aa5.22□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 Lypd5Q9D7Z7 256 aa5.22□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 Lrp4Q8VI56 1905 aa5.21□□□□□ -1.57
Rc3h1-202ENSMUST00000161609 Sox16Q62247 57 aa5.21□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Gm10135F6TEE5 83 aa5.21□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Plxnb3Q9QY40 1902 aa5.21□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Gm10845Q3UNY9 185 aa5.21□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Gm17349F7BGH6 99 aa5.2□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Gm5468Q8C3D3 155 aa5.2□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Bcorl1A2AQH4 1781 aa5.19□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Flg2Q2VIS4 2362 aa5.19□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 UtrnE9Q6R7 3430 aa5.19□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Gm26620Q9CY65 116 aa5.19□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Smr3aQ61900 147 aa5.18□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Hivep3A2A884 2348 aa5.18□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Coa6Q8BGD8 79 aa5.17□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 2310057N15RikQ9D6T8 200 aa5.17□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms