RNA–Protein interactions for RNA: ENSMUST00000111198.8

Cd44-208, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-208ENSMUST00000111198 Ighv1-62-1A0A075B5U3 116 aa5.42□□□□□ -1.54
Cd44-208ENSMUST00000111198 Ighv10-1A0A0B4J1J6 119 aa5.42□□□□□ -1.54
Cd44-208ENSMUST00000111198 Defa2P28309 93 aa5.42□□□□□ -1.54
Cd44-208ENSMUST00000111198 Gm4861Q8C5A4 106 aa5.42□□□□□ -1.54
Cd44-208ENSMUST00000111198 Krtap16-1A2A5X5 502 aa5.42□□□□□ -1.54
Cd44-208ENSMUST00000111198 Gm10542F6XDR3 90 aa5.42□□□□□ -1.54
Cd44-208ENSMUST00000111198 Pglyrp4Q0VB07 374 aa5.42□□□□□ -1.54
Cd44-208ENSMUST00000111198 4930470P17RikQ9D542 155 aa5.42□□□□□ -1.54
Cd44-208ENSMUST00000111198 Trav9n-2A0A0G2JDP3 113 aa5.41□□□□□ -1.54
Cd44-208ENSMUST00000111198 Rpl28P41105 137 aaKnown RBP5.41□□□□□ -1.54
Cd44-208ENSMUST00000111198 Gm9922Q8C3P1 144 aa5.41□□□□□ -1.54
Cd44-208ENSMUST00000111198 Stab2Q8R4U0 2559 aa5.41□□□□□ -1.54
Cd44-208ENSMUST00000111198 Fras1Q80T14 4010 aa5.4□□□□□ -1.54
Cd44-208ENSMUST00000111198 Gm16381A0A1Y7VKT9 73 aa5.4□□□□□ -1.54
Cd44-208ENSMUST00000111198 Sostdc1Q9CQN4 206 aa5.4□□□□□ -1.54
Cd44-208ENSMUST00000111198 Igkv4-79A0A075B5L8 119 aa5.4□□□□□ -1.55
Cd44-208ENSMUST00000111198 1700011M02RikB1AX35 88 aa5.4□□□□□ -1.55
Cd44-208ENSMUST00000111198 Fam19a1Q7TPG8 133 aa5.4□□□□□ -1.55
Cd44-208ENSMUST00000111198 AY074887Q8R5F9 132 aa5.4□□□□□ -1.55
Cd44-208ENSMUST00000111198 Dnal4Q9DCM4 105 aa5.4□□□□□ -1.55
Cd44-208ENSMUST00000111198 Gm9507D3Z5T3 223 aa5.39□□□□□ -1.55
Cd44-208ENSMUST00000111198 Cdc42se2Q8BGH7 84 aa5.39□□□□□ -1.55
Cd44-208ENSMUST00000111198 Trav9d-4A0A0G2JG37 103 aa5.38□□□□□ -1.55
Cd44-208ENSMUST00000111198 Igf1P05017 153 aa5.38□□□□□ -1.55
Cd44-208ENSMUST00000111198 D130052B06RikQ3UW13 202 aa5.38□□□□□ -1.55
Cd44-208ENSMUST00000111198 Dand5Q76LW6 185 aa5.38□□□□□ -1.55
Cd44-208ENSMUST00000111198 4930524J08RikQ9CUJ5 163 aa5.38□□□□□ -1.55
Cd44-208ENSMUST00000111198 Ly6g6cQ9Z1Q4 126 aa5.38□□□□□ -1.55
Cd44-208ENSMUST00000111198 Hbb-b2P02089 147 aa5.37□□□□□ -1.55
Cd44-208ENSMUST00000111198 Ndufa12Q7TMF3 145 aaKnown RBP5.37□□□□□ -1.55
Cd44-208ENSMUST00000111198 Gm9918Q8BUR5 174 aa5.37□□□□□ -1.55
Cd44-208ENSMUST00000111198 D730001G18RikA0A087WQU7 115 aa5.36□□□□□ -1.55
Cd44-208ENSMUST00000111198 P01745 121 aa5.36□□□□□ -1.55
Cd44-208ENSMUST00000111198 Smim26Q3V460 107 aa5.36□□□□□ -1.55
Cd44-208ENSMUST00000111198 Dnah3Q8BW94 4083 aa5.36□□□□□ -1.55
Cd44-208ENSMUST00000111198 Gm9513B3GLJ6 99 aa5.36□□□□□ -1.55
Cd44-208ENSMUST00000111198 Tfpi2O35536 230 aa5.36□□□□□ -1.55
Cd44-208ENSMUST00000111198 Spink1P09036 80 aa5.36□□□□□ -1.55
Cd44-208ENSMUST00000111198 Plac8l1Q08EJ0 177 aa5.36□□□□□ -1.55
Cd44-208ENSMUST00000111198 Krtap4-1Q3UUY3 169 aa5.36□□□□□ -1.55
Cd44-208ENSMUST00000111198 Vmo1Q5SXG7 201 aa5.36□□□□□ -1.55
Cd44-208ENSMUST00000111198 Defb42Q8BVB5 75 aa5.36□□□□□ -1.55
Cd44-208ENSMUST00000111198 Ighv2-9-1A0A075B697 116 aa5.35□□□□□ -1.55
Cd44-208ENSMUST00000111198 Gm37389A0A0A6YW05 95 aa5.35□□□□□ -1.55
Cd44-208ENSMUST00000111198 Ighv1-56A0A0A6YXG2 117 aa5.35□□□□□ -1.55
Cd44-208ENSMUST00000111198 Rpl18aP62717 176 aaKnown RBP5.35□□□□□ -1.55
Cd44-208ENSMUST00000111198 Wfdc3Q14AE4 130 aa5.35□□□□□ -1.55
Cd44-208ENSMUST00000111198 CrygaP04345 174 aa5.35□□□□□ -1.55
Cd44-208ENSMUST00000111198 Hist1h4aP62806 103 aaKnown RBP5.35□□□□□ -1.55
Cd44-208ENSMUST00000111198 Gm10647E9Q8X0 124 aa5.34□□□□□ -1.55
Cd44-208ENSMUST00000111198 AW011738F6S7Q2 159 aa5.34□□□□□ -1.55
Cd44-208ENSMUST00000111198 Ppp1r32Q148A4 427 aa5.34□□□□□ -1.55
Cd44-208ENSMUST00000111198 Defb29Q8BGW9 78 aa5.34□□□□□ -1.55
Cd44-208ENSMUST00000111198 Chchd7Q8K2Q5 85 aa5.34□□□□□ -1.55
Cd44-208ENSMUST00000111198 Pfn2Q9JJV2 140 aa5.34□□□□□ -1.55
Cd44-208ENSMUST00000111198 PlecQ9QXS1 4691 aaKnown RBP5.34□□□□□ -1.55
Cd44-208ENSMUST00000111198 Igkv1-35A0A0G2JDE5 120 aa5.33□□□□□ -1.56
Cd44-208ENSMUST00000111198 Igkv6-13A0A0G2JGY3 119 aa5.33□□□□□ -1.56
Cd44-208ENSMUST00000111198 Rps28P62858 69 aaKnown RBP5.33□□□□□ -1.56
Cd44-208ENSMUST00000111198 ScxQ64124 207 aa5.33□□□□□ -1.56
Cd44-208ENSMUST00000111198 Leap2Q91V13 76 aa5.33□□□□□ -1.56
Cd44-208ENSMUST00000111198 Ighv8-11A0A075B5X4 119 aa5.33□□□□□ -1.56
Cd44-208ENSMUST00000111198 Ighv1-49A0A0A6YWX2 117 aa5.33□□□□□ -1.56
Cd44-208ENSMUST00000111198 Igkv1-117A0A140T8M0 119 aa5.33□□□□□ -1.56
Cd44-208ENSMUST00000111198 Tmem254aP0DN89 123 aa5.33□□□□□ -1.56
Cd44-208ENSMUST00000111198 Tmem254bP0DN90 123 aa5.33□□□□□ -1.56
Cd44-208ENSMUST00000111198 Tmem254cP0DN91 123 aa5.33□□□□□ -1.56
Cd44-208ENSMUST00000111198 Zfand2aQ9JII7 171 aa5.33□□□□□ -1.56
Cd44-208ENSMUST00000111198 Sh2d1aO88890 126 aa5.32□□□□□ -1.56
Cd44-208ENSMUST00000111198 Tcl1b3P56842 122 aa5.32□□□□□ -1.56
Cd44-208ENSMUST00000111198 Serp2Q6TAW2 65 aa5.32□□□□□ -1.56
Cd44-208ENSMUST00000111198 Nop10Q9CQS2 64 aa5.32□□□□□ -1.56
Cd44-208ENSMUST00000111198 4930519P11RikQ9CUJ8 166 aa5.32□□□□□ -1.56
Cd44-208ENSMUST00000111198 Gm7257D3YX25 99 aa5.31□□□□□ -1.56
Cd44-208ENSMUST00000111198 Gm20726G3UX18 150 aa5.31□□□□□ -1.56
Cd44-208ENSMUST00000111198 Tmem258P61166 79 aa5.31□□□□□ -1.56
Cd44-208ENSMUST00000111198 Trav9d-3A0A075B695 113 aa5.31□□□□□ -1.56
Cd44-208ENSMUST00000111198 7530416G11RikJ3QJX6 159 aa5.31□□□□□ -1.56
Cd44-208ENSMUST00000111198 Defb50Q6TU36 73 aa5.31□□□□□ -1.56
Cd44-208ENSMUST00000111198 MobpQ9D2P8 170 aa5.31□□□□□ -1.56
Cd44-208ENSMUST00000111198 E130218I03RikA0A0U1RNU5 63 aa5.3□□□□□ -1.56
Cd44-208ENSMUST00000111198 Gm19935A0A1B0GSF9 52 aa5.3□□□□□ -1.56
Cd44-208ENSMUST00000111198 Inafm2A0A1L1STD6 152 aa5.3□□□□□ -1.56
Cd44-208ENSMUST00000111198 2310050C09RikG5E8Z3 280 aa5.3□□□□□ -1.56
Cd44-208ENSMUST00000111198 Gm7102J3QQ10 178 aa5.3□□□□□ -1.56
Cd44-208ENSMUST00000111198 Defa4P28311 92 aa5.3□□□□□ -1.56
Cd44-208ENSMUST00000111198 Defa7P50705 93 aa5.3□□□□□ -1.56
Cd44-208ENSMUST00000111198 Cox7a1P56392 80 aa5.3□□□□□ -1.56
Cd44-208ENSMUST00000111198 Gm9821Q8K076 103 aa5.3□□□□□ -1.56
Cd44-208ENSMUST00000111198 Gm43218A0A0G2JGT0 114 aa5.29□□□□□ -1.56
Cd44-208ENSMUST00000111198 Gm16181B0V2H2 73 aa5.29□□□□□ -1.56
Cd44-208ENSMUST00000111198 Samd13D3YUG0 102 aa5.29□□□□□ -1.56
Cd44-208ENSMUST00000111198 P01755 137 aa5.29□□□□□ -1.56
Cd44-208ENSMUST00000111198 MifP34884 115 aaKnown RBP5.29□□□□□ -1.56
Cd44-208ENSMUST00000111198 Higd2aQ9CQJ1 106 aa5.29□□□□□ -1.56
Cd44-208ENSMUST00000111198 Dync2h1Q45VK7 4306 aa5.29□□□□□ -1.56
Cd44-208ENSMUST00000111198 Tmem243B2RVB9 118 aa5.29□□□□□ -1.56
Cd44-208ENSMUST00000111198 Gm10320E9PW43 113 aa5.29□□□□□ -1.56
Cd44-208ENSMUST00000111198 GhrhP16043 103 aa5.29□□□□□ -1.56
Cd44-208ENSMUST00000111198 Tmem223Q9CQE2 199 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms