RNA–Protein interactions for RNA: ENSMUST00000100064.8

Scn9a-202, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Scn9a, Length 9,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-202ENSMUST00000100064 Gm28230A0A0A0MQ91 144 aa7.48□□□□□ -1.21
Scn9a-202ENSMUST00000100064 Pla2g2eQ9QUL3 142 aa7.47□□□□□ -1.21
Scn9a-202ENSMUST00000100064 Unc79Q0KK59 2596 aa7.46□□□□□ -1.21
Scn9a-202ENSMUST00000100064 Gm12216A0A1W2P827 62 aa7.46□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Spata3Q9D9T6 193 aa7.46□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Wdr38Q9D994 303 aa7.46□□□□□ -1.22
Scn9a-202ENSMUST00000100064 PpdpfQ9CR37 115 aa7.46□□□□□ -1.22
Scn9a-202ENSMUST00000100064 SetxA2AKX3 2646 aa7.45□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Gm20538F6Z9R1 75 aa7.45□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Gm10642Q3TWM1 71 aa7.44□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Q9DAA7 145 aa7.44□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Srsf12Q8C8K3 266 aa7.44□□□□□ -1.22
Scn9a-202ENSMUST00000100064 AI606181Q8C7B9 129 aa7.44□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Prol1E9PYQ4 312 aa7.43□□□□□ -1.22
Scn9a-202ENSMUST00000100064 RetnlbQ99P86 105 aa7.43□□□□□ -1.22
Scn9a-202ENSMUST00000100064 FlnbQ80X90 2602 aaKnown RBP7.43□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Polr2kQ63871 58 aa7.43□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Znf414Q9DCK4 299 aa7.43□□□□□ -1.22
Scn9a-202ENSMUST00000100064 B230217C12RikE9Q3Z1 139 aa7.42□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Abca12E9Q876 2595 aa7.42□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Gm16223Q8CBM3 117 aa7.42□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Col4a2P08122 1707 aa7.42□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Gm10570F6VB42 170 aa7.41□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Chchd10Q7TNL9 138 aa7.41□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Krtap27-1E9PX37 202 aa7.41□□□□□ -1.22
Scn9a-202ENSMUST00000100064 UqcrqQ9CQ69 82 aa7.41□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Gm16181B0V2H2 73 aa7.4□□□□□ -1.22
Scn9a-202ENSMUST00000100064 Gm17689B3GLJ4 109 aa7.39□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Gm5153P01627 120 aa7.39□□□□□ -1.23
Scn9a-202ENSMUST00000100064 CenpwQ3URR0 86 aa7.39□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Col27a1Q5QNQ9 1845 aa7.38□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Gpr15lA0A0B4J1N3 78 aa7.38□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Gm5142Q8C5X9 133 aa7.38□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Odf3l2Q3TZ65 277 aa7.38□□□□□ -1.23
Scn9a-202ENSMUST00000100064 2310034G01RikA0A286YDL3 209 aa7.37□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Cox6a2P43023 97 aa7.36□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Q8BGJ3 129 aa7.36□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Gm28539A0A087WSL9 92 aa7.36□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Defb50Q6TU36 73 aa7.36□□□□□ -1.23
Scn9a-202ENSMUST00000100064 CrygaP04345 174 aa7.35□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Ighv2-5A0A0A6YY69 116 aa7.35□□□□□ -1.23
Scn9a-202ENSMUST00000100064 6430550D23RikE9Q1X6 194 aa7.34□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Gm11627A6PWP4 55 aa7.34□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Reg3aO09037 175 aa7.34□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Rpl37aP61514 92 aa7.34□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Bean1Q9EQG5 255 aa7.34□□□□□ -1.23
Scn9a-202ENSMUST00000100064 CnfnQ6PCW6 111 aa7.34□□□□□ -1.23
Scn9a-202ENSMUST00000100064 Smim1P0C8K7 78 aa7.33□□□□□ -1.24
Scn9a-202ENSMUST00000100064 4930524J08RikQ9CUJ5 163 aa7.33□□□□□ -1.24
Scn9a-202ENSMUST00000100064 A830031A19RikQ8BNT5 113 aa7.33□□□□□ -1.24
Scn9a-202ENSMUST00000100064 Cep192E9Q4Y4 2514 aaKnown RBP7.33□□□□□ -1.24
Scn9a-202ENSMUST00000100064 Nbeal1E9PYP2 2688 aa7.33□□□□□ -1.24
Scn9a-202ENSMUST00000100064 A730009L09RikA0A1B0GS82 72 aa7.31□□□□□ -1.24
Scn9a-202ENSMUST00000100064 Gm21886J3QJU9 214 aa7.31□□□□□ -1.24
Scn9a-202ENSMUST00000100064 Cd164Q9R0L9 197 aa7.3□□□□□ -1.24
Scn9a-202ENSMUST00000100064 Gm10845Q3UNY9 185 aa7.3□□□□□ -1.24
Scn9a-202ENSMUST00000100064 Gm10999F6Q4M4 69 aa7.3□□□□□ -1.24
Scn9a-202ENSMUST00000100064 AtrQ9JKK8 2635 aa7.3□□□□□ -1.24
Scn9a-202ENSMUST00000100064 Gm10300Q8C8P7 189 aa7.3□□□□□ -1.24
Scn9a-202ENSMUST00000100064 4930507D05RikQ8C9C9 103 aa7.3□□□□□ -1.24
Scn9a-202ENSMUST00000100064 Prr9Q8BV84 116 aa7.29□□□□□ -1.24
Scn9a-202ENSMUST00000100064 A930002H24RikQ8C8Y3 163 aa7.29□□□□□ -1.24
Scn9a-202ENSMUST00000100064 Spaca4Q80ZQ0 127 aa7.28□□□□□ -1.24
Scn9a-202ENSMUST00000100064 4930432M17RikQ3V0W9 174 aa7.28□□□□□ -1.24
Scn9a-202ENSMUST00000100064 Limd2Q8BGB5 128 aa7.28□□□□□ -1.24
Scn9a-202ENSMUST00000100064 Pla2g10Q9QXX3 151 aa7.27□□□□□ -1.24
Scn9a-202ENSMUST00000100064 Kmt2bO08550 2713 aa7.27□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Gm19935A0A1B0GSF9 52 aa7.27□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Gm43218A0A0G2JGT0 114 aa7.27□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Gm26566Q8CAC1 153 aa7.27□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Alms1Q8K4E0 3251 aa7.27□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Dmac1Q9CQ00 111 aa7.27□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Gm10337F7DEP7 55 aa7.26□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Gm9573F7C950 1606 aa7.26□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Msrb1Q9JLC3 116 aa7.26□□□□□ -1.25
Scn9a-202ENSMUST00000100064 BC025920Q3US60 128 aa7.26□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Mrpl34Q99N91 92 aa7.26□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Cdip1Q9DB75 208 aa7.25□□□□□ -1.25
Scn9a-202ENSMUST00000100064 1700018G05RikA0A1B0GSI2 66 aa7.25□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Mp68P56379 58 aa7.25□□□□□ -1.25
Scn9a-202ENSMUST00000100064 CdsnQ7TPC1 561 aa7.25□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Gm10549Q3URY4 149 aa7.25□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Gm10160F6Y577 67 aa7.24□□□□□ -1.25
Scn9a-202ENSMUST00000100064 AplnQ9R0R4 77 aa7.24□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Fn1P11276 2477 aaKnown RBP7.24□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Q9DAB9 146 aa7.24□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Spint4Q9D263 159 aa7.23□□□□□ -1.25
Scn9a-202ENSMUST00000100064 OxtP35454 125 aa7.23□□□□□ -1.25
Scn9a-202ENSMUST00000100064 E130208F15RikQ3UPV3 143 aa7.23□□□□□ -1.25
Scn9a-202ENSMUST00000100064 BtcQ05928 177 aa7.22□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Krtap24-1G3X9A2 248 aa7.22□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Gm26661M0QWV4 156 aa7.22□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Phf5aP83870 110 aaKnown RBP7.21□□□□□ -1.25
Scn9a-202ENSMUST00000100064 Gm27235Q3UW50 83 aa7.21□□□□□ -1.26
Scn9a-202ENSMUST00000100064 Gm3285A0A1W2P7U0 201 aa7.2□□□□□ -1.26
Scn9a-202ENSMUST00000100064 Gm10837Q3UTT8 145 aa7.2□□□□□ -1.26
Scn9a-202ENSMUST00000100064 Akap13E9Q394 2776 aa7.19□□□□□ -1.26
Scn9a-202ENSMUST00000100064 Dmbt1Q60997 2085 aa7.19□□□□□ -1.26
Scn9a-202ENSMUST00000100064 Spink13Q3UTS8 97 aa7.19□□□□□ -1.26
Scn9a-202ENSMUST00000100064 Coa6Q8BGD8 79 aa7.18□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms