RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Pla2g2eQ9QUL3 142 aa7.43□□□□□ -1.22
Scn8a-201ENSMUST00000082209 Gm26661M0QWV4 156 aa7.42□□□□□ -1.22
Scn8a-201ENSMUST00000082209 Gm9887F6RFI0 207 aa7.42□□□□□ -1.22
Scn8a-201ENSMUST00000082209 Limd2Q8BGB5 128 aa7.42□□□□□ -1.22
Scn8a-201ENSMUST00000082209 PtprqP0C5E4 2300 aa7.41□□□□□ -1.22
Scn8a-201ENSMUST00000082209 Cyyr1Q8VIH7 165 aa7.41□□□□□ -1.22
Scn8a-201ENSMUST00000082209 Gm10135F6TEE5 83 aa7.4□□□□□ -1.22
Scn8a-201ENSMUST00000082209 4930518I15RikQ3V2W7 57 aa7.4□□□□□ -1.22
Scn8a-201ENSMUST00000082209 Igkv3-7A0A0G2JE31 119 aa7.4□□□□□ -1.22
Scn8a-201ENSMUST00000082209 Dmac1Q9CQ00 111 aa7.4□□□□□ -1.23
Scn8a-201ENSMUST00000082209 4930535I16RikQ9CUI2 172 aa7.39□□□□□ -1.23
Scn8a-201ENSMUST00000082209 D730001G18RikA0A087WQU7 115 aa7.39□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Gm10570F6VB42 170 aa7.39□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Gm11627A6PWP4 55 aa7.39□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Wisp2Q9Z0G4 251 aa7.38□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Usp9xP70398 2559 aaKnown RBP7.38□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Gm28230A0A0A0MQ91 144 aa7.38□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Wfdc13Q5DQQ6 81 aa7.38□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Gm12057A0A087WR21 115 aa7.38□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Cdip1Q9DB75 208 aa7.38□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Krtap26-1Q9D7N2 215 aa7.38□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Cox6a2P43023 97 aa7.37□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Msrb1Q9JLC3 116 aa7.37□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Gm26566Q8CAC1 153 aa7.37□□□□□ -1.23
Scn8a-201ENSMUST00000082209 PolqQ8CGS6 2544 aa7.37□□□□□ -1.23
Scn8a-201ENSMUST00000082209 9230102O04RikA2ASX7 82 aa7.37□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Defb45Q3V490 66 aa7.37□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Srsf12Q8C8K3 266 aa7.37□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Crip2Q9DCT8 208 aaKnown RBP7.36□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Adm2Q7TNK8 150 aa7.36□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Gm16485Q8C4B7 115 aa7.35□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Krtap16-1A2A5X5 502 aa7.35□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Spint4Q9D263 159 aa7.35□□□□□ -1.23
Scn8a-201ENSMUST00000082209 CrygaP04345 174 aa7.35□□□□□ -1.23
Scn8a-201ENSMUST00000082209 ScxQ64124 207 aa7.34□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Mrpl34Q99N91 92 aa7.34□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Elof1P60003 83 aa7.34□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Defb2P82020 71 aa7.34□□□□□ -1.23
Scn8a-201ENSMUST00000082209 Q9DAA7 145 aa7.34□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Gm16181B0V2H2 73 aa7.33□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Ptpn13Q64512 2453 aa7.33□□□□□ -1.24
Scn8a-201ENSMUST00000082209 A0A286YCN5 57 aa7.33□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Gm10267M0QWD8 85 aa7.33□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Spink13Q3UTS8 97 aa7.33□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Cd164Q9R0L9 197 aa7.33□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Dnah12Q3V0Q1 3086 aa7.32□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Gm17606F6ZL36 78 aa7.32□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Gm10160F6Y577 67 aa7.31□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Gm10837Q3UTT8 145 aa7.31□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Defb10Q8R2I8 73 aa7.31□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Gm10308Q9CVR5 141 aa7.3□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Wfdc6bF6ULY1 148 aa7.3□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Kmt2bO08550 2713 aa7.3□□□□□ -1.24
Scn8a-201ENSMUST00000082209 AW011738F6S7Q2 159 aa7.3□□□□□ -1.24
Scn8a-201ENSMUST00000082209 CdsnQ7TPC1 561 aa7.29□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Reg3aO09037 175 aa7.29□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Prol1E9PYQ4 312 aa7.28□□□□□ -1.24
Scn8a-201ENSMUST00000082209 TrrapQ80YV3 2565 aaKnown RBP7.28□□□□□ -1.24
Scn8a-201ENSMUST00000082209 SetxA2AKX3 2646 aa7.28□□□□□ -1.24
Scn8a-201ENSMUST00000082209 MobpQ9D2P8 170 aa7.28□□□□□ -1.24
Scn8a-201ENSMUST00000082209 Gm42715A0A087WP63 3095 aaKnown RBP7.26□□□□□ -1.25
Scn8a-201ENSMUST00000082209 2310034G01RikA0A286YDL3 209 aa7.26□□□□□ -1.25
Scn8a-201ENSMUST00000082209 SnurfQ9WU12 71 aa7.26□□□□□ -1.25
Scn8a-201ENSMUST00000082209 UtrnE9Q6R7 3430 aa7.25□□□□□ -1.25
Scn8a-201ENSMUST00000082209 Setd2E9Q5F9 2537 aa7.25□□□□□ -1.25
Scn8a-201ENSMUST00000082209 Gm10643Q3URG9 111 aa7.25□□□□□ -1.25
Scn8a-201ENSMUST00000082209 4930507D05RikQ8C9C9 103 aa7.25□□□□□ -1.25
Scn8a-201ENSMUST00000082209 Ly6g6cQ9Z1Q4 126 aa7.25□□□□□ -1.25
Scn8a-201ENSMUST00000082209 A730009L09RikA0A1B0GS82 72 aa7.25□□□□□ -1.25
Scn8a-201ENSMUST00000082209 Gm12216A0A1W2P827 62 aa7.22□□□□□ -1.25
Scn8a-201ENSMUST00000082209 Igkv8-27A0A0G2JF28 120 aa7.21□□□□□ -1.25
Scn8a-201ENSMUST00000082209 Cep192E9Q4Y4 2514 aaKnown RBP7.21□□□□□ -1.25
Scn8a-201ENSMUST00000082209 Znf414Q9DCK4 299 aa7.2□□□□□ -1.26
Scn8a-201ENSMUST00000082209 E130208F15RikQ3UPV3 143 aa7.19□□□□□ -1.26
Scn8a-201ENSMUST00000082209 Rpl37aP61514 92 aa7.19□□□□□ -1.26
Scn8a-201ENSMUST00000082209 Gm21886J3QJU9 214 aa7.18□□□□□ -1.26
Scn8a-201ENSMUST00000082209 Epg5Q80TA9 2572 aa7.17□□□□□ -1.26
Scn8a-201ENSMUST00000082209 4930519P11RikQ9CUJ8 166 aa7.17□□□□□ -1.26
Scn8a-201ENSMUST00000082209 Cdc42se1Q8BHL7 80 aa7.17□□□□□ -1.26
Scn8a-201ENSMUST00000082209 Notch2O35516 2470 aa7.17□□□□□ -1.26
Scn8a-201ENSMUST00000082209 AI606181Q8C7B9 129 aa7.16□□□□□ -1.26
Scn8a-201ENSMUST00000082209 1600014C23RikQ9DAX4 101 aa7.16□□□□□ -1.26
Scn8a-201ENSMUST00000082209 Gm27235Q3UW50 83 aa7.16□□□□□ -1.26
Scn8a-201ENSMUST00000082209 Uqcr11Q9CPX8 56 aa7.16□□□□□ -1.26
Scn8a-201ENSMUST00000082209 A530084C06RikQ3UTW2 186 aa7.15□□□□□ -1.26
Scn8a-201ENSMUST00000082209 Gm10197F6QEY5 67 aa7.14□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Wfdc3Q14AE4 130 aa7.14□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Bean1Q9EQG5 255 aa7.14□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Defb11Q8R2I7 77 aa7.14□□□□□ -1.27
Scn8a-201ENSMUST00000082209 MtorQ9JLN9 2549 aa7.14□□□□□ -1.27
Scn8a-201ENSMUST00000082209 CenpfE9Q3P4 2997 aaKnown RBP7.13□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Sostdc1Q9CQN4 206 aa7.13□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Wfdc17Q5SSJ1 76 aa7.13□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Cep350E9Q309 3095 aa7.13□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Jbts17Q8CE72 3214 aa7.12□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Defb38Q7TNV7 63 aa7.12□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Sprr1bQ62267 153 aa7.11□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Gm7276Q3TYW4 209 aa7.11□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Gm10772F7AIG4 85 aa7.1□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Spata3Q9D9T6 193 aa7.1□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 90.4 ms