RNA–Protein interactions for RNA: ENSMUST00000055425.14

Phtf1-201, Transcript of Putative homeodomain transcription factor 1, mousemouse

TSL 1 (best) BASIC

Gene Phtf1, Length 3,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1-201ENSMUST00000055425 Col7a1Q63870 2944 aa11.49□□□□□ -0.57
Phtf1-201ENSMUST00000055425 Setd2E9Q5F9 2537 aa11.49□□□□□ -0.57
Phtf1-201ENSMUST00000055425 Igkv4-54A0A0G2JES9 117 aa11.49□□□□□ -0.57
Phtf1-201ENSMUST00000055425 Defa20Q45VN2 95 aa11.49□□□□□ -0.57
Phtf1-201ENSMUST00000055425 Gm5153P01627 120 aa11.48□□□□□ -0.57
Phtf1-201ENSMUST00000055425 Fam19a1Q7TPG8 133 aa11.48□□□□□ -0.57
Phtf1-201ENSMUST00000055425 MplkipQ9D011 178 aa11.48□□□□□ -0.57
Phtf1-201ENSMUST00000055425 Unc79Q0KK59 2596 aa11.47□□□□□ -0.57
Phtf1-201ENSMUST00000055425 E130208F15RikQ3UPV3 143 aa11.47□□□□□ -0.57
Phtf1-201ENSMUST00000055425 Wfdc12Q9JHY3 85 aa11.47□□□□□ -0.57
Phtf1-201ENSMUST00000055425 Igkv4-61A0A0G2JH00 117 aa11.47□□□□□ -0.57
Phtf1-201ENSMUST00000055425 Gm10320E9PW43 113 aa11.46□□□□□ -0.57
Phtf1-201ENSMUST00000055425 C530025M09RikF6RGA8 229 aa11.46□□□□□ -0.57
Phtf1-201ENSMUST00000055425 EnhoQ8K1D8 76 aa11.46□□□□□ -0.57
Phtf1-201ENSMUST00000055425 Epg5Q80TA9 2572 aa11.46□□□□□ -0.57
Phtf1-201ENSMUST00000055425 Hivep3A2A884 2348 aa11.46□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Igkv4-58A0A0G2JGI6 119 aa11.45□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Tcl1b3P56842 122 aa11.45□□□□□ -0.58
Phtf1-201ENSMUST00000055425 PrcdQ00LT2 53 aa11.45□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Psors1c2Q80ZC9 134 aa11.45□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Trav9n-4A0A075B631 113 aa11.44□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Igkv8-21A0A140T8P7 120 aa11.44□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Gm9903Q8C9Y8 129 aa11.44□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Tmem86bQ497J1 226 aa11.43□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Gm10518F6UQQ9 182 aa11.43□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Gm9767G3X930 207 aa11.42□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Fam229bQ8CF36 80 aa11.42□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Myo18bE9PV66 2605 aa11.42□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Ube2d4D3YUH6 135 aa11.42□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Igkv8-16A0A0G2JDG9 121 aa11.41□□□□□ -0.58
Phtf1-201ENSMUST00000055425 B230307C23RikQ8BLB2 64 aa11.41□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Ormdl1Q921I0 153 aa11.41□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Ighv10-3A0A075B5T6 119 aa11.41□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Ighv1-59A0A0A6YXE0 117 aa11.41□□□□□ -0.58
Phtf1-201ENSMUST00000055425 P01819 144 aa11.41□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Leap2Q91V13 76 aa11.41□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Igkv8-27A0A0G2JF28 120 aa11.4□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Igkv8-30A0A140T8M3 121 aa11.4□□□□□ -0.58
Phtf1-201ENSMUST00000055425 Ankrd11E9Q4F7 2643 aa11.39□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Trbv13-2A0A140T8N6 113 aa11.39□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Brk1Q91VR8 75 aa11.39□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Samd13D3YUG0 102 aa11.39□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Tmem258P61166 79 aa11.39□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Ighv2-9A0A075B5Q5 116 aa11.38□□□□□ -0.59
Phtf1-201ENSMUST00000055425 CnbpP53996 178 aaKnown RBP11.38□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Gm10308Q9CVR5 141 aa11.38□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Reg3dQ9QUS9 175 aa11.38□□□□□ -0.59
Phtf1-201ENSMUST00000055425 E130218I03RikA0A0U1RNU5 63 aa11.38□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Ubl5Q9EPV8 73 aa11.38□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Krtap24-1G3X9A2 248 aa11.37□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Igkv8-24A0A140T8P5 121 aa11.37□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Igkv8-26A0A075B5N5 123 aa11.36□□□□□ -0.59
Phtf1-201ENSMUST00000055425 CrygdP04342 174 aa11.36□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Igkv3-9A0A140T8P4 119 aa11.35□□□□□ -0.59
Phtf1-201ENSMUST00000055425 GhrhP16043 103 aa11.35□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Lamtor3O88653 124 aa11.35□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Gm9805F6YK59 57 aa11.34□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Rps28P62858 69 aaKnown RBP11.34□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Q8R092 253 aa11.34□□□□□ -0.59
Phtf1-201ENSMUST00000055425 4930556J24RikQ9D4U7 146 aa11.34□□□□□ -0.59
Phtf1-201ENSMUST00000055425 TrrapQ80YV3 2565 aaKnown RBP11.34□□□□□ -0.59
Phtf1-201ENSMUST00000055425 Cox7bP56393 80 aa11.33□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Gm19935A0A1B0GSF9 52 aa11.32□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Higd2aQ9CQJ1 106 aa11.32□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Gm3250E9Q1M3 230 aa11.32□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Tex15F8VPN2 2785 aa11.31□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Klk9Q32M27 251 aa11.31□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Fam19a5Q91WE9 132 aa11.31□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Krtap11-1E9Q2E9 183 aa11.3□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Gm17689B3GLJ4 109 aa11.3□□□□□ -0.6
Phtf1-201ENSMUST00000055425 SnurfQ9WU12 71 aa11.3□□□□□ -0.6
Phtf1-201ENSMUST00000055425 D730001G18RikA0A087WQU7 115 aa11.29□□□□□ -0.6
Phtf1-201ENSMUST00000055425 BikO70337 150 aa11.29□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Tcl1b5P56845 121 aa11.29□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Fam19a3Q7TPG6 132 aa11.29□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Mrpl52Q9D0Y8 121 aa11.29□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Inafm2A0A1L1STD6 152 aa11.28□□□□□ -0.6
Phtf1-201ENSMUST00000055425 A0A286YCN5 57 aa11.28□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Dad1P61804 113 aa11.28□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Ighv10-1A0A0B4J1J6 119 aa11.28□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Mast4Q811L6 2618 aa11.28□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Msrb1Q9JLC3 116 aa11.27□□□□□ -0.6
Phtf1-201ENSMUST00000055425 Igkv1-110A0A0B4J1I0 119 aa11.26□□□□□ -0.61
Phtf1-201ENSMUST00000055425 9530003J23RikQ8BM26 151 aa11.26□□□□□ -0.61
Phtf1-201ENSMUST00000055425 CrygfQ9CXV3 174 aa11.26□□□□□ -0.61
Phtf1-201ENSMUST00000055425 CrygeQ03740 174 aa11.25□□□□□ -0.61
Phtf1-201ENSMUST00000055425 Defa27F2Z403 93 aa11.24□□□□□ -0.61
Phtf1-201ENSMUST00000055425 Cmc4Q61908 68 aa11.24□□□□□ -0.61
Phtf1-201ENSMUST00000055425 Gm10770F7D043 238 aa11.24□□□□□ -0.61
Phtf1-201ENSMUST00000055425 Ighv13-2A0A0A6YWN3 119 aa11.23□□□□□ -0.61
Phtf1-201ENSMUST00000055425 Defb37Q7TMD2 62 aa11.23□□□□□ -0.61
Phtf1-201ENSMUST00000055425 Igkv1-88A0A140T8N1 120 aa11.22□□□□□ -0.61
Phtf1-201ENSMUST00000055425 AY074887Q8R5F9 132 aa11.22□□□□□ -0.61
Phtf1-201ENSMUST00000055425 Gm3233E9Q2H5 230 aa11.22□□□□□ -0.61
Phtf1-201ENSMUST00000055425 Rbm3O89086 153 aaKnown RBP11.22□□□□□ -0.61
Phtf1-201ENSMUST00000055425 A730071L15RikQ8C4X0 137 aa11.22□□□□□ -0.61
Phtf1-201ENSMUST00000055425 Ighv2-5A0A0A6YY69 116 aa11.21□□□□□ -0.61
Phtf1-201ENSMUST00000055425 Erdr1J3QMM0 206 aa11.21□□□□□ -0.61
Phtf1-201ENSMUST00000055425 A830005F24RikQ8BRT5 167 aa11.21□□□□□ -0.62
Phtf1-201ENSMUST00000055425 E130114P18RikF6S0S7 154 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 142.7 ms