RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 Smim1P0C8K7 78 aa6.35□□□□□ -1.39
Polr1a-201ENSMUST00000055296 Gm17509Q9CZ61 145 aa6.35□□□□□ -1.39
Polr1a-201ENSMUST00000055296 P01659 112 aa6.35□□□□□ -1.39
Polr1a-201ENSMUST00000055296 Gm10642Q3TWM1 71 aa6.35□□□□□ -1.39
Polr1a-201ENSMUST00000055296 Polr2kQ63871 58 aa6.35□□□□□ -1.39
Polr1a-201ENSMUST00000055296 Ankhd1E9PUR0 2548 aaKnown RBP6.35□□□□□ -1.39
Polr1a-201ENSMUST00000055296 Defb10Q8R2I8 73 aa6.34□□□□□ -1.39
Polr1a-201ENSMUST00000055296 Gm10322F7D7I4 111 aa6.34□□□□□ -1.39
Polr1a-201ENSMUST00000055296 Q9CX25 107 aa6.34□□□□□ -1.39
Polr1a-201ENSMUST00000055296 Q9DAA7 145 aa6.34□□□□□ -1.39
Polr1a-201ENSMUST00000055296 Defb42Q8BVB5 75 aa6.34□□□□□ -1.39
Polr1a-201ENSMUST00000055296 Cdc42se2Q8BGH7 84 aa6.34□□□□□ -1.4
Polr1a-201ENSMUST00000055296 AI606181Q8C7B9 129 aa6.34□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Setd2E9Q5F9 2537 aa6.33□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Phxr5P08399 672 aa6.33□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Gm10197F6QEY5 67 aa6.32□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Coa6Q8BGD8 79 aa6.32□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Lmo4P61969 165 aa6.32□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Mrpl34Q99N91 92 aa6.32□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Spry4Q9WTP2 300 aa6.32□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Ptpn13Q64512 2453 aa6.31□□□□□ -1.4
Polr1a-201ENSMUST00000055296 6430550D23RikE9Q1X6 194 aa6.31□□□□□ -1.4
Polr1a-201ENSMUST00000055296 CnfnQ6PCW6 111 aa6.31□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Gm10226O88253 85 aa6.31□□□□□ -1.4
Polr1a-201ENSMUST00000055296 4930507D05RikQ8C9C9 103 aa6.31□□□□□ -1.4
Polr1a-201ENSMUST00000055296 7530416G11RikJ3QJX6 159 aa6.3□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Ighv8-13A0A075B5Y0 101 aa6.3□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Gm9925F6T2U3 160 aa6.3□□□□□ -1.4
Polr1a-201ENSMUST00000055296 1700018G05RikA0A1B0GSI2 66 aa6.29□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Gm10509O88255 85 aa6.29□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Gm9903Q8C9Y8 129 aa6.29□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Gm10845Q3UNY9 185 aa6.29□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Bri3P28662 125 aa6.28□□□□□ -1.4
Polr1a-201ENSMUST00000055296 4930518I15RikQ3V2W7 57 aa6.28□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Znf239P24399 201 aa6.28□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Gm10643Q3URG9 111 aa6.28□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Alms1Q8K4E0 3251 aa6.28□□□□□ -1.4
Polr1a-201ENSMUST00000055296 E130116L18RikQ8BMV6 101 aa6.28□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Gm26661M0QWV4 156 aa6.28□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Pla2g2dQ9WVF6 144 aa6.28□□□□□ -1.4
Polr1a-201ENSMUST00000055296 Gm9767G3X930 207 aa6.27□□□□□ -1.4
Polr1a-201ENSMUST00000055296 CrygaP04345 174 aa6.27□□□□□ -1.41
Polr1a-201ENSMUST00000055296 4930432M17RikQ3V0W9 174 aa6.27□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Gpr15lA0A0B4J1N3 78 aa6.27□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Cdc42se1Q8BHL7 80 aa6.27□□□□□ -1.41
Polr1a-201ENSMUST00000055296 2310034G01RikA0A286YDL3 209 aa6.27□□□□□ -1.41
Polr1a-201ENSMUST00000055296 1700056E22RikF7CNM6 234 aa6.27□□□□□ -1.41
Polr1a-201ENSMUST00000055296 MtorQ9JLN9 2549 aa6.26□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Msrb1Q9JLC3 116 aa6.26□□□□□ -1.41
Polr1a-201ENSMUST00000055296 AvpP35455 168 aa6.25□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Gm9922Q8C3P1 144 aa6.25□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Wisp2Q9Z0G4 251 aa6.25□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Usp9xP70398 2559 aaKnown RBP6.24□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Spaca4Q80ZQ0 127 aa6.24□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Fam19a3Q7TPG6 132 aa6.24□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Gm27235Q3UW50 83 aa6.23□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Pla2g2eQ9QUL3 142 aa6.23□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Gm21886J3QJU9 214 aa6.23□□□□□ -1.41
Polr1a-201ENSMUST00000055296 A530084C06RikQ3UTW2 186 aa6.23□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Rtl10D3YWW5 146 aa6.22□□□□□ -1.41
Polr1a-201ENSMUST00000055296 CriptO70333 101 aa6.22□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Gm10549Q3URY4 149 aa6.22□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Lce6aD3YV94 81 aa6.21□□□□□ -1.41
Polr1a-201ENSMUST00000055296 Piezo1E2JF22 2547 aa6.21□□□□□ -1.42
Polr1a-201ENSMUST00000055296 Col4a2P08122 1707 aa6.21□□□□□ -1.42
Polr1a-201ENSMUST00000055296 Gm10135F6TEE5 83 aa6.19□□□□□ -1.42
Polr1a-201ENSMUST00000055296 Cd164l2Q9D6W7 172 aa6.19□□□□□ -1.42
Polr1a-201ENSMUST00000055296 Defb2P82020 71 aa6.18□□□□□ -1.42
Polr1a-201ENSMUST00000055296 Krtap16-1A2A5X5 502 aa6.18□□□□□ -1.42
Polr1a-201ENSMUST00000055296 Usp9yF8VPU6 2556 aa6.18□□□□□ -1.42
Polr1a-201ENSMUST00000055296 Ighv2-2A0A075B5P8 116 aa6.18□□□□□ -1.42
Polr1a-201ENSMUST00000055296 P01821 116 aa6.18□□□□□ -1.42
Polr1a-201ENSMUST00000055296 Rpl37aP61514 92 aa6.17□□□□□ -1.42
Polr1a-201ENSMUST00000055296 Cdip1Q9DB75 208 aa6.16□□□□□ -1.42
Polr1a-201ENSMUST00000055296 Gm44790A0A0N4SV91 103 aa6.16□□□□□ -1.42
Polr1a-201ENSMUST00000055296 Defb11Q8R2I7 77 aa6.16□□□□□ -1.42
Polr1a-201ENSMUST00000055296 Odf3l2Q3TZ65 277 aa6.15□□□□□ -1.42
Polr1a-201ENSMUST00000055296 Spink13Q3UTS8 97 aa6.15□□□□□ -1.42
Polr1a-201ENSMUST00000055296 A930009A15RikG3UYI6 118 aa6.14□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Gm3443F7CCV5 94 aa6.14□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Myo18bE9PV66 2605 aa6.13□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Gm17689B3GLJ4 109 aa6.13□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Ankrd11E9Q4F7 2643 aa6.13□□□□□ -1.43
Polr1a-201ENSMUST00000055296 TrrapQ80YV3 2565 aaKnown RBP6.13□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Srsf12Q8C8K3 266 aa6.13□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Dmac1Q9CQ00 111 aa6.13□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Krtap27-1E9PX37 202 aa6.13□□□□□ -1.43
Polr1a-201ENSMUST00000055296 B430305J03RikQ8BQQ8 176 aa6.13□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Znf580Q9DB38 172 aa6.13□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Epg5Q80TA9 2572 aa6.12□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Phf5aP83870 110 aaKnown RBP6.12□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Crip3Q6Q6R3 243 aa6.12□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Pla2g2cP48076 150 aa6.11□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Gm11627A6PWP4 55 aa6.1□□□□□ -1.43
Polr1a-201ENSMUST00000055296 MobpQ9D2P8 170 aa6.1□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Chd8Q09XV5 2582 aaKnown RBP6.1□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Gm5617Q91VN2 117 aa6.1□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Spink7Q6IE32 76 aa6.09□□□□□ -1.43
Polr1a-201ENSMUST00000055296 Gm10300Q8C8P7 189 aa6.07□□□□□ -1.44
Polr1a-201ENSMUST00000055296 Nbeal1E9PYP2 2688 aa6.07□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms