RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Abca12E9Q876 2595 aa12.76□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Gm10845Q3UNY9 185 aa12.76□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Igkv3-7A0A0G2JE31 119 aa12.76□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Defb39Q70KL3 74 aa12.76□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Dnah12Q3V0Q1 3086 aa12.76□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Mrpl52Q9D0Y8 121 aa12.75□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Q9DAA7 145 aa12.75□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Cd164Q9R0L9 197 aa12.74□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Epg5Q80TA9 2572 aa12.74□□□□□ -0.37
Scaf11-201ENSMUST00000047835 3110070M22RikQ9DAQ7 118 aa12.74□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Spink13Q3UTS8 97 aa12.73□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Gm43218A0A0G2JGT0 114 aa12.73□□□□□ -0.37
Scaf11-201ENSMUST00000047835 H2al1bA0A087WP11 105 aa12.73□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Spata3Q9D9T6 193 aa12.73□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Gm10549Q3URY4 149 aa12.71□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Serp2Q6TAW2 65 aa12.71□□□□□ -0.37
Scaf11-201ENSMUST00000047835 P84750 121 aa12.71□□□□□ -0.37
Scaf11-201ENSMUST00000047835 Zfp292Q9Z2U2 2698 aa12.71□□□□□ -0.38
Scaf11-201ENSMUST00000047835 CrygaP04345 174 aa12.7□□□□□ -0.38
Scaf11-201ENSMUST00000047835 Apoc4Q61268 124 aa12.7□□□□□ -0.38
Scaf11-201ENSMUST00000047835 Wfdc17Q5SSJ1 76 aa12.7□□□□□ -0.38
Scaf11-201ENSMUST00000047835 E130208F15RikQ3UPV3 143 aa12.69□□□□□ -0.38
Scaf11-201ENSMUST00000047835 Wfdc6bF6ULY1 148 aa12.69□□□□□ -0.38
Scaf11-201ENSMUST00000047835 Defb37Q7TMD2 62 aa12.68□□□□□ -0.38
Scaf11-201ENSMUST00000047835 Ighv1-56A0A0A6YXG2 117 aa12.67□□□□□ -0.38
Scaf11-201ENSMUST00000047835 Snhg11Q4G0K9 87 aa12.67□□□□□ -0.38
Scaf11-201ENSMUST00000047835 H2al1aQ5M8Q2 105 aa12.67□□□□□ -0.38
Scaf11-201ENSMUST00000047835 H2al1eQ810S6 105 aa12.67□□□□□ -0.38
Scaf11-201ENSMUST00000047835 4930519P11RikQ9CUJ8 166 aa12.66□□□□□ -0.38
Scaf11-201ENSMUST00000047835 CenpfE9Q3P4 2997 aaKnown RBP12.66□□□□□ -0.38
Scaf11-201ENSMUST00000047835 Gm10642Q3TWM1 71 aa12.65□□□□□ -0.38
Scaf11-201ENSMUST00000047835 Gm3233E9Q2H5 230 aa12.65□□□□□ -0.38
Scaf11-201ENSMUST00000047835 MobpQ9D2P8 170 aa12.65□□□□□ -0.38
Scaf11-201ENSMUST00000047835 Gm26661M0QWV4 156 aa12.65□□□□□ -0.38
Scaf11-201ENSMUST00000047835 Gm28230A0A0A0MQ91 144 aa12.65□□□□□ -0.38
Scaf11-201ENSMUST00000047835 Gm28539A0A087WSL9 92 aa12.64□□□□□ -0.39
Scaf11-201ENSMUST00000047835 1700074P13RikQ9D9G7 251 aa12.64□□□□□ -0.39
Scaf11-201ENSMUST00000047835 Ndufs5Q99LY9 106 aa12.64□□□□□ -0.39
Scaf11-201ENSMUST00000047835 Unc79Q0KK59 2596 aa12.62□□□□□ -0.39
Scaf11-201ENSMUST00000047835 Gm9887F6RFI0 207 aa12.62□□□□□ -0.39
Scaf11-201ENSMUST00000047835 1810062G17RikG3X8Y2 129 aa12.61□□□□□ -0.39
Scaf11-201ENSMUST00000047835 Krtap26-1Q9D7N2 215 aa12.59□□□□□ -0.39
Scaf11-201ENSMUST00000047835 Cep350E9Q309 3095 aa12.59□□□□□ -0.39
Scaf11-201ENSMUST00000047835 TrioQ0KL02 3102 aa12.59□□□□□ -0.39
Scaf11-201ENSMUST00000047835 Vpreb1P13372 142 aa12.56□□□□□ -0.4
Scaf11-201ENSMUST00000047835 UqcrqQ9CQ69 82 aa12.56□□□□□ -0.4
Scaf11-201ENSMUST00000047835 SvipQ3UZP4 77 aa12.54□□□□□ -0.4
Scaf11-201ENSMUST00000047835 PtprqP0C5E4 2300 aa12.54□□□□□ -0.4
Scaf11-201ENSMUST00000047835 Sostdc1Q9CQN4 206 aa12.54□□□□□ -0.4
Scaf11-201ENSMUST00000047835 Gm11627A6PWP4 55 aa12.53□□□□□ -0.4
Scaf11-201ENSMUST00000047835 1700018G05RikA0A1B0GSI2 66 aa12.53□□□□□ -0.4
Scaf11-201ENSMUST00000047835 Igkv8-19A0A0G2JFN8 121 aa12.53□□□□□ -0.4
Scaf11-201ENSMUST00000047835 Defb45Q3V490 66 aa12.53□□□□□ -0.4
Scaf11-201ENSMUST00000047835 Gm10772F7AIG4 85 aa12.52□□□□□ -0.4
Scaf11-201ENSMUST00000047835 Reg3aO09037 175 aa12.52□□□□□ -0.4
Scaf11-201ENSMUST00000047835 Phf5aP83870 110 aaKnown RBP12.52□□□□□ -0.41
Scaf11-201ENSMUST00000047835 Msrb1Q9JLC3 116 aa12.51□□□□□ -0.41
Scaf11-201ENSMUST00000047835 Lama3Q61789 3330 aa12.5□□□□□ -0.41
Scaf11-201ENSMUST00000047835 Hcfc1Q61191 2045 aaKnown RBP12.5□□□□□ -0.41
Scaf11-201ENSMUST00000047835 Ndufb1P0DN34 57 aa12.49□□□□□ -0.41
Scaf11-201ENSMUST00000047835 Cox6a2P43023 97 aa12.49□□□□□ -0.41
Scaf11-201ENSMUST00000047835 Gm10837Q3UTT8 145 aa12.48□□□□□ -0.41
Scaf11-201ENSMUST00000047835 Znf414Q9DCK4 299 aa12.47□□□□□ -0.41
Scaf11-201ENSMUST00000047835 Dmac1Q9CQ00 111 aa12.47□□□□□ -0.41
Scaf11-201ENSMUST00000047835 Mrpl34Q99N91 92 aa12.45□□□□□ -0.42
Scaf11-201ENSMUST00000047835 RetnlbQ99P86 105 aa12.45□□□□□ -0.42
Scaf11-201ENSMUST00000047835 Serp1Q9Z1W5 66 aa12.45□□□□□ -0.42
Scaf11-201ENSMUST00000047835 AI606181Q8C7B9 129 aa12.44□□□□□ -0.42
Scaf11-201ENSMUST00000047835 Myo18bE9PV66 2605 aa12.44□□□□□ -0.42
Scaf11-201ENSMUST00000047835 Ankrd17Q99NH0 2603 aaKnown RBP12.42□□□□□ -0.42
Scaf11-201ENSMUST00000047835 2310034G01RikA0A286YDL3 209 aa12.42□□□□□ -0.42
Scaf11-201ENSMUST00000047835 AplnQ9R0R4 77 aa12.42□□□□□ -0.42
Scaf11-201ENSMUST00000047835 CicQ924A2 2510 aa12.41□□□□□ -0.42
Scaf11-201ENSMUST00000047835 Pou2af1Q64693 256 aa12.41□□□□□ -0.42
Scaf11-201ENSMUST00000047835 Gm9903Q8C9Y8 129 aa12.41□□□□□ -0.42
Scaf11-201ENSMUST00000047835 Prune2Q52KR3 3084 aa12.4□□□□□ -0.42
Scaf11-201ENSMUST00000047835 Fam19a3Q7TPG6 132 aa12.4□□□□□ -0.42
Scaf11-201ENSMUST00000047835 Krtap11-1E9Q2E9 183 aa12.4□□□□□ -0.42
Scaf11-201ENSMUST00000047835 Smr3aQ61900 147 aa12.4□□□□□ -0.42
Scaf11-201ENSMUST00000047835 H2al1mQ9DAD9 105 aa12.4□□□□□ -0.42
Scaf11-201ENSMUST00000047835 Lelp1Q9DAE3 120 aa12.4□□□□□ -0.42
Scaf11-201ENSMUST00000047835 Elof1P60003 83 aa12.4□□□□□ -0.42
Scaf11-201ENSMUST00000047835 PolqQ8CGS6 2544 aa12.39□□□□□ -0.43
Scaf11-201ENSMUST00000047835 P01819 144 aa12.39□□□□□ -0.43
Scaf11-201ENSMUST00000047835 Chchd10Q7TNL9 138 aa12.39□□□□□ -0.43
Scaf11-201ENSMUST00000047835 Fam168bQ80XQ8 194 aa12.38□□□□□ -0.43
Scaf11-201ENSMUST00000047835 Csdc2Q91YQ3 154 aa12.38□□□□□ -0.43
Scaf11-201ENSMUST00000047835 Gm10570F6VB42 170 aa12.38□□□□□ -0.43
Scaf11-201ENSMUST00000047835 Lypd5Q9D7Z7 256 aa12.37□□□□□ -0.43
Scaf11-201ENSMUST00000047835 Sox16Q62247 57 aa12.37□□□□□ -0.43
Scaf11-201ENSMUST00000047835 Gm5617Q91VN2 117 aa12.36□□□□□ -0.43
Scaf11-201ENSMUST00000047835 Lama2Q60675 3118 aaKnown RBP12.36□□□□□ -0.43
Scaf11-201ENSMUST00000047835 Gpr15lA0A0B4J1N3 78 aa12.35□□□□□ -0.43
Scaf11-201ENSMUST00000047835 Gm21886J3QJU9 214 aa12.35□□□□□ -0.43
Scaf11-201ENSMUST00000047835 Cep192E9Q4Y4 2514 aaKnown RBP12.34□□□□□ -0.43
Scaf11-201ENSMUST00000047835 Igkv8-27A0A0G2JF28 120 aa12.33□□□□□ -0.44
Scaf11-201ENSMUST00000047835 Cdip1Q9DB75 208 aa12.33□□□□□ -0.44
Scaf11-201ENSMUST00000047835 Gm44790A0A0N4SV91 103 aa12.33□□□□□ -0.44
Scaf11-201ENSMUST00000047835 Usp34Q6ZQ93 3582 aa12.32□□□□□ -0.44
Scaf11-201ENSMUST00000047835 Spaca4Q80ZQ0 127 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms