RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ighv1-56A0A0A6YXG2 117 aa8.18□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Defb13Q8R2I4 64 aa8.18□□□□□ -1.1
Pcif1-201ENSMUST00000041643 CenpwQ3URR0 86 aa8.17□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Mrpl52Q9D0Y8 121 aa8.17□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Wfdc17Q5SSJ1 76 aa8.17□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Mrpl55Q9CZ83 127 aa8.17□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Gm10772F7AIG4 85 aa8.17□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Gm10549Q3URY4 149 aa8.16□□□□□ -1.1
Pcif1-201ENSMUST00000041643 P06320 134 aa8.16□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Ifitm6A0A1B0GS75 124 aa8.15□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Lypd5Q9D7Z7 256 aa8.15□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Igkv1-110A0A0B4J1I0 119 aa8.14□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Ankrd17Q99NH0 2603 aaKnown RBP8.14□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Gm20604F8WIA3 75 aa8.14□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Epg5Q80TA9 2572 aa8.14□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Spink13Q3UTS8 97 aa8.14□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Tmem213Q08EA8 116 aa8.13□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Gm10135F6TEE5 83 aa8.13□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Ndufc1Q9CQY9 76 aa8.13□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Spink8Q09TK9 105 aa8.13□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Zfp462B1AWL2 2495 aaKnown RBP8.13□□□□□ -1.11
Pcif1-201ENSMUST00000041643 4930519P11RikQ9CUJ8 166 aa8.12□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Defb45Q3V490 66 aa8.12□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Igkv3-12A0A140T8P0 119 aa8.11□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Cd164Q9R0L9 197 aa8.11□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Igkv8-30A0A140T8M3 121 aa8.11□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Gm10845Q3UNY9 185 aa8.1□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Gm7173A0A0G2JEB6 3132 aa8.1□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Q9DAA7 145 aa8.1□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Sprr2jO70561 109 aa8.09□□□□□ -1.11
Pcif1-201ENSMUST00000041643 AplnQ9R0R4 77 aa8.09□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Szt2A2A9C3 3431 aa8.09□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Psors1c2Q80ZC9 134 aa8.09□□□□□ -1.11
Pcif1-201ENSMUST00000041643 Gm11627A6PWP4 55 aa8.08□□□□□ -1.12
Pcif1-201ENSMUST00000041643 MtorQ9JLN9 2549 aa8.08□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Unc80Q8BLN6 3261 aa8.07□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Wfdc6bF6ULY1 148 aa8.07□□□□□ -1.12
Pcif1-201ENSMUST00000041643 AI854703Q8BIN3 203 aa8.07□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Myo15bI7HPW8 3033 aa8.07□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Sostdc1Q9CQN4 206 aa8.07□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Jbts17Q8CE72 3214 aa8.06□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Smr3aQ61900 147 aa8.06□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Brk1Q91VR8 75 aa8.06□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Tmem258P61166 79 aa8.05□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Wfdc3Q14AE4 130 aa8.05□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Krtap11-1E9Q2E9 183 aa8.04□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Hivep3A2A884 2348 aa8.03□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Defb37Q7TMD2 62 aa8.03□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Gm7138L7N2C3 230 aa8.03□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Gm10642Q3TWM1 71 aa8.03□□□□□ -1.12
Pcif1-201ENSMUST00000041643 Gm3238W4VSP7 230 aa8.03□□□□□ -1.12
Pcif1-201ENSMUST00000041643 A0A286YE49 62 aa8.02□□□□□ -1.13
Pcif1-201ENSMUST00000041643 P84750 121 aa8.01□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Notch2O35516 2470 aa8.01□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Unc79Q0KK59 2596 aa8.01□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Csdc2Q91YQ3 154 aa8.01□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Cfap54Q8C6S9 3106 aa8.01□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Gm9903Q8C9Y8 129 aa8□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Dmac1Q9CQ00 111 aa8□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Igkv8-28A0A0G2JE47 121 aa8□□□□□ -1.13
Pcif1-201ENSMUST00000041643 6430550D23RikE9Q1X6 194 aa8□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Gm10837Q3UTT8 145 aa8□□□□□ -1.13
Pcif1-201ENSMUST00000041643 C130032M10RikQ8C888 123 aa8□□□□□ -1.13
Pcif1-201ENSMUST00000041643 SptssbQ925E8 76 aa7.99□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Gm28230A0A0A0MQ91 144 aa7.99□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Vpreb2P13373 142 aa7.99□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Phf5aP83870 110 aaKnown RBP7.99□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Msrb1Q9JLC3 116 aa7.99□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Atox1O08997 68 aaKnown RBP7.98□□□□□ -1.13
Pcif1-201ENSMUST00000041643 P01819 144 aa7.98□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Znf414Q9DCK4 299 aa7.98□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Defb39Q70KL3 74 aa7.97□□□□□ -1.13
Pcif1-201ENSMUST00000041643 AW011738F6S7Q2 159 aa7.97□□□□□ -1.13
Pcif1-201ENSMUST00000041643 Elof1P60003 83 aa7.96□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Setd2E9Q5F9 2537 aa7.96□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Serp2Q6TAW2 65 aa7.95□□□□□ -1.14
Pcif1-201ENSMUST00000041643 SvipQ3UZP4 77 aa7.95□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Pou2af1Q64693 256 aa7.95□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Hectd1Q69ZR2 2618 aaKnown RBP7.95□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Smim20D3Z7Q2 69 aa7.95□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Gm9195A0A140LHT4 2805 aa7.94□□□□□ -1.14
Pcif1-201ENSMUST00000041643 UqcrqQ9CQ69 82 aa7.94□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Cox6a2P43023 97 aa7.94□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Gm7137J3QMW1 236 aa7.94□□□□□ -1.14
Pcif1-201ENSMUST00000041643 2310034G01RikA0A286YDL3 209 aa7.94□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Fam19a3Q7TPG6 132 aa7.94□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Cep192E9Q4Y4 2514 aaKnown RBP7.94□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Fam168bQ80XQ8 194 aa7.93□□□□□ -1.14
Pcif1-201ENSMUST00000041643 1700018G05RikA0A1B0GSI2 66 aa7.93□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Bod1lE9Q6J5 3032 aa7.93□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Gm10267M0QWD8 85 aa7.93□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Prol1E9PYQ4 312 aa7.93□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Ankrd11E9Q4F7 2643 aa7.92□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Defb50Q6TU36 73 aa7.92□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Vps13aQ5H8C4 3166 aa7.92□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Chchd10Q7TNL9 138 aa7.91□□□□□ -1.14
Pcif1-201ENSMUST00000041643 Sprr4Q8CGN8 76 aa7.9□□□□□ -1.15
Pcif1-201ENSMUST00000041643 1700074P13RikQ9D9G7 251 aa7.88□□□□□ -1.15
Pcif1-201ENSMUST00000041643 Sprr1bQ62267 153 aa7.88□□□□□ -1.15
Pcif1-201ENSMUST00000041643 Mrpl34Q99N91 92 aa7.88□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 60.4 ms