RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Gm3618D3Z4P5 127 aa13.11□□□□□ -0.31
Ccdc50-201ENSMUST00000039443 Gm2916Q9D9B9 127 aa13.11□□□□□ -0.31
Ccdc50-201ENSMUST00000039443 Ighv2-9A0A075B5Q5 116 aa13.11□□□□□ -0.31
Ccdc50-201ENSMUST00000039443 Q9DAA7 145 aa13.11□□□□□ -0.31
Ccdc50-201ENSMUST00000039443 Gm10308Q9CVR5 141 aa13.1□□□□□ -0.31
Ccdc50-201ENSMUST00000039443 Ormdl1Q921I0 153 aa13.1□□□□□ -0.31
Ccdc50-201ENSMUST00000039443 Fbn1Q61554 2873 aaKnown RBP13.09□□□□□ -0.31
Ccdc50-201ENSMUST00000039443 Rps28P62858 69 aaKnown RBP13.09□□□□□ -0.31
Ccdc50-201ENSMUST00000039443 4930556J24RikQ9D4U7 146 aa13.09□□□□□ -0.31
Ccdc50-201ENSMUST00000039443 CnbpP53996 178 aaKnown RBP13.08□□□□□ -0.31
Ccdc50-201ENSMUST00000039443 Igkv4-54A0A0G2JES9 117 aa13.08□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Gm9767G3X930 207 aa13.08□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Cox7bP56393 80 aa13.08□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 PrcdQ00LT2 53 aa13.08□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Trav9n-4A0A075B631 113 aa13.07□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Gm20726G3UX18 150 aa13.07□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Tmem258P61166 79 aa13.07□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Itpr2Q9Z329 2701 aa13.07□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Cmc4Q61908 68 aa13.07□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Igkv3-9A0A140T8P4 119 aa13.06□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Gm9903Q8C9Y8 129 aa13.06□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 AtrQ9JKK8 2635 aa13.06□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Wnk1P83741 2377 aa13.05□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 C530025M09RikF6RGA8 229 aa13.05□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Defa7P50705 93 aa13.05□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Ubl5Q9EPV8 73 aa13.05□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 MifP34884 115 aaKnown RBP13.04□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Gm19935A0A1B0GSF9 52 aa13.04□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Ube2d4D3YUH6 135 aa13.04□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Fn1P11276 2477 aaKnown RBP13.03□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Igkv2-109A0A075B5K6 120 aa13.03□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Trav13-2A0A075B649 110 aa13.03□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 4930518I15RikQ3V2W7 57 aa13.03□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Igkv8-26A0A075B5N5 123 aa13.03□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Ighv10-1A0A0B4J1J6 119 aa13.03□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Tmem243B2RVB9 118 aa13.03□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 Q8R092 253 aa13.03□□□□□ -0.32
Ccdc50-201ENSMUST00000039443 GhrhP16043 103 aa13.02□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Mrpl52Q9D0Y8 121 aa13.02□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Ighv2-5A0A0A6YY69 116 aa13.01□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Trbv13-2A0A140T8N6 113 aa13.01□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Cystm1Q8K353 104 aa13.01□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Klk12B2RVZ0 247 aa13.01□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Gm3233E9Q2H5 230 aa13.01□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Igkv8-21A0A140T8P7 120 aa13□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 E130208F15RikQ3UPV3 143 aa13□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Nsd1O88491 2588 aaKnown RBP13□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Gm10518F6UQQ9 182 aa13□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Defa21Q8C1P2 93 aa12.99□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Igkv8-27A0A0G2JF28 120 aa12.97□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Igkv8-30A0A140T8M3 121 aa12.97□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Defb10Q8R2I8 73 aa12.97□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Igkv8-16A0A0G2JDG9 121 aa12.97□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 2010109I03RikQ9CQ11 111 aa12.97□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Gm9805F6YK59 57 aa12.96□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Defa4P28311 92 aa12.96□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 Reg3dQ9QUS9 175 aa12.96□□□□□ -0.33
Ccdc50-201ENSMUST00000039443 EnhoQ8K1D8 76 aa12.96□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Igkv8-24A0A140T8P5 121 aa12.95□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Pde6gP09174 87 aa12.94□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Samd13D3YUG0 102 aa12.94□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Prh1P05142 261 aa12.94□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Ndufc1Q9CQY9 76 aa12.94□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Naa38Q9D2U5 125 aa12.94□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Gm10320E9PW43 113 aa12.93□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 CrygdP04342 174 aa12.93□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Dad1P61804 113 aa12.93□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Gm10770F7D043 238 aa12.92□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Lamtor3O88653 124 aa12.92□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Fam19a1Q7TPG8 133 aa12.92□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Leap2Q91V13 76 aa12.92□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 E130114P18RikF6S0S7 154 aa12.91□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 4930535I16RikQ9CUI2 172 aa12.91□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Igkv4-58A0A0G2JGI6 119 aa12.9□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 Krtap24-1G3X9A2 248 aa12.9□□□□□ -0.34
Ccdc50-201ENSMUST00000039443 9530003J23RikQ8BM26 151 aa12.88□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 Wfdc12Q9JHY3 85 aa12.88□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 Xirp2Q4U4S6 3784 aa12.87□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 Rbm3O89086 153 aaKnown RBP12.87□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 Defa23Q5G866 93 aa12.87□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 MplkipQ9D011 178 aa12.87□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 Ighv2-2A0A075B5P8 116 aa12.86□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 D730001G18RikA0A087WQU7 115 aa12.86□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 P01821 116 aa12.86□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 CrygeQ03740 174 aa12.86□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 AY074887Q8R5F9 132 aa12.86□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 Hivep1Q03172 2688 aa12.85□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 Krtap11-1E9Q2E9 183 aa12.84□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 CrygfQ9CXV3 174 aa12.84□□□□□ -0.35
Ccdc50-201ENSMUST00000039443 Spata3Q9D9T6 193 aa12.83□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 Msrb1Q9JLC3 116 aa12.83□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 Ighv8-13A0A075B5Y0 101 aa12.83□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 Gm17509Q9CZ61 145 aa12.83□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 B230307C23RikQ8BLB2 64 aa12.82□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 Igkv3-1A0A075B5P1 119 aa12.81□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 Gm11213A0A1B0GR83 88 aa12.81□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 Wfdc17Q5SSJ1 76 aa12.81□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 E130218I03RikA0A0U1RNU5 63 aa12.81□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 BC048502Q80Y74 154 aa12.81□□□□□ -0.36
Ccdc50-201ENSMUST00000039443 Igkv4-92A0A0B4J1I2 117 aa12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 67.1 ms