RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Mc5rP41149 325 aa9.49□□□□□ -0.89
Ercc1-201ENSMUST00000003645 Tal2Q62282 108 aa9.49□□□□□ -0.89
Ercc1-201ENSMUST00000003645 C920008G01RikA0A0B4J1N1 112 aa9.48□□□□□ -0.89
Ercc1-201ENSMUST00000003645 Vamp8O70404 101 aa9.48□□□□□ -0.89
Ercc1-201ENSMUST00000003645 A0A286YCN5 57 aa9.47□□□□□ -0.89
Ercc1-201ENSMUST00000003645 Sostdc1Q9CQN4 206 aa9.47□□□□□ -0.89
Ercc1-201ENSMUST00000003645 Ufsp1Q9CZP0 217 aa9.47□□□□□ -0.89
Ercc1-201ENSMUST00000003645 Trav4d-3A0A075B625 110 aa9.46□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Gm28269A0A087WSG3 125 aa9.46□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Igkv8-16A0A0G2JDG9 121 aa9.46□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Gm11627A6PWP4 55 aa9.46□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Hbb-b2P02089 147 aa9.46□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Igkv3-2A0A075B5P0 119 aa9.45□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Trav13-2A0A075B649 110 aa9.45□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Wfdc12Q9JHY3 85 aa9.45□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Rpl13aP19253 203 aaKnown RBP9.44□□□□□ -0.9
Ercc1-201ENSMUST00000003645 MifP34884 115 aaKnown RBP9.44□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Gm10577Q3UDV9 132 aa9.44□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Pou2af1Q64693 256 aa9.44□□□□□ -0.9
Ercc1-201ENSMUST00000003645 1700012A03RikQ9DAF1 130 aa9.44□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Pfn2Q9JJV2 140 aa9.44□□□□□ -0.9
Ercc1-201ENSMUST00000003645 BC107364E9Q5A2 140 aa9.43□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Ryr2E9Q401 4966 aaKnown RBP9.43□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Ryr3A2AGL3 4863 aa9.43□□□□□ -0.9
Ercc1-201ENSMUST00000003645 SycnQ8VCK7 134 aa9.42□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Gm10518F6UQQ9 182 aa9.41□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Pgpep1Q9ESW8 209 aa9.41□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Gm2696A0A1W2P709 240 aa9.4□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Ube2d4D3YUH6 135 aa9.4□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Glrp1E9Q9S8 174 aa9.4□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Gm10065F6TJM2 114 aa9.4□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Cops9Q3U898 57 aa9.4□□□□□ -0.9
Ercc1-201ENSMUST00000003645 Gm11020F6ZGD5 61 aa9.39□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Tcl1b3P56842 122 aa9.39□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Rpl24Q8BP67 157 aaKnown RBP9.39□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Reg3dQ9QUS9 175 aa9.38□□□□□ -0.91
Ercc1-201ENSMUST00000003645 PkigO70139 76 aa9.37□□□□□ -0.91
Ercc1-201ENSMUST00000003645 S100a8P27005 89 aa9.37□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Try10Q792Z1 246 aaKnown RBP9.37□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Gemin7Q9CWY4 129 aa9.37□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Wfdc6bF6ULY1 148 aa9.37□□□□□ -0.91
Ercc1-201ENSMUST00000003645 4930415O20RikQ8CDT5 131 aa9.37□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Krtap29-1A2A5X4 342 aa9.36□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Gm6793B2RXM2 351 aa9.36□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Defa23Q5G866 93 aa9.36□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Zcchc13Q9D548 170 aa9.36□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Dnah5Q8VHE6 4621 aa9.35□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Smim13E9Q942 88 aa9.35□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Lst1O08843 95 aa9.34□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Cox7bP56393 80 aa9.34□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Cited1P97769 203 aa9.34□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Gm10845Q3UNY9 185 aa9.34□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Ntn5Q3UQ22 452 aa9.34□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Fam168bQ80XQ8 194 aa9.34□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Vmn1r197Q8R265 298 aa9.34□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Lage3Q9CR70 148 aa9.34□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Wdr38Q9D994 303 aa9.34□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Dync1h1Q9JHU4 4644 aaKnown RBP9.34□□□□□ -0.91
Ercc1-201ENSMUST00000003645 Defa27F2Z403 93 aa9.33□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Csdc2Q91YQ3 154 aa9.33□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Igkv8-18A0A0B4J1J3 123 aa9.32□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Prol1E9PYQ4 312 aa9.32□□□□□ -0.92
Ercc1-201ENSMUST00000003645 MalO09198 153 aa9.32□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Krtap13O88375 197 aa9.32□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Defa22Q8C1N8 93 aa9.32□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Slamf6Q9ET39 351 aa9.32□□□□□ -0.92
Ercc1-201ENSMUST00000003645 P01843 105 aa9.31□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Ighv1-62-2A0A0A6YXZ4 119 aa9.3□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Obox2E9PXV9 151 aa9.3□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Pglyrp4Q0VB07 374 aa9.3□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Gm10549Q3URY4 149 aa9.3□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Gm5153P01627 120 aa9.29□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Fam19a1Q7TPG8 133 aa9.29□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Znf414Q9DCK4 299 aa9.29□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Gpr15lA0A0B4J1N3 78 aa9.28□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Smr3aQ61900 147 aa9.28□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Fam19a5Q91WE9 132 aa9.28□□□□□ -0.92
Ercc1-201ENSMUST00000003645 Igkv1-117A0A140T8M0 119 aa9.27□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Rpl18aP62717 176 aaKnown RBP9.27□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Defa20Q45VN2 95 aa9.27□□□□□ -0.93
Ercc1-201ENSMUST00000003645 G0s2Q61585 103 aa9.27□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Eif4ebp3Q80VV3 101 aa9.27□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Ociad2Q9D8W7 154 aa9.27□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Ly6hQ9WUC3 139 aa9.27□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Ighv2-2A0A075B5P8 116 aa9.26□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Ighv2-5A0A0A6YY69 116 aa9.26□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Igkv1-88A0A140T8N1 120 aa9.26□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Gm11027G8JL69 66 aa9.26□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Scgb1b3J3QJY4 93 aa9.26□□□□□ -0.93
Ercc1-201ENSMUST00000003645 P01821 116 aa9.26□□□□□ -0.93
Ercc1-201ENSMUST00000003645 P84750 121 aa9.26□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Pcp4l1Q6W8Q3 68 aa9.26□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Cdk2ap2Q9CPY4 127 aa9.26□□□□□ -0.93
Ercc1-201ENSMUST00000003645 1600014C23RikQ9DAX4 101 aa9.26□□□□□ -0.93
Ercc1-201ENSMUST00000003645 CckP09240 115 aa9.25□□□□□ -0.93
Ercc1-201ENSMUST00000003645 5930422O12RikQ8C4Y4 123 aa9.25□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Defb9Q8R2I6 67 aa9.25□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Stard9Q80TF6 4561 aa9.25□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Fat1A0A1L1SQU7 4645 aa9.25□□□□□ -0.93
Ercc1-201ENSMUST00000003645 P01819 144 aa9.24□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms