RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Eif4ebp3Q80VV3 101 aa6.73□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Igkv1-88A0A140T8N1 120 aa6.72□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Fgf23Q9EPC2 251 aa6.72□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Muc2Q80Z19 2680 aa6.72□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Igkv1-122A0A140T8M9 119 aa6.72□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Serp1Q9Z1W5 66 aa6.72□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Utp20Q5XG71 2788 aaKnown RBP6.71□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Gm3250E9Q1M3 230 aa6.71□□□□□ -1.33
Col6a1-201ENSMUST00000001147 4930546C10RikE9Q4Y3 121 aa6.71□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Igfn1Q3KNY0 2849 aa6.71□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Itpr3P70227 2670 aa6.71□□□□□ -1.33
Col6a1-201ENSMUST00000001147 A0A286YE02 88 aa6.71□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Chchd7Q8K2Q5 85 aa6.71□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Gm9767G3X930 207 aa6.7□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Tmem223Q9CQE2 199 aaKnown RBP6.7□□□□□ -1.34
Col6a1-201ENSMUST00000001147 4930524J08RikQ9CUJ5 163 aa6.7□□□□□ -1.34
Col6a1-201ENSMUST00000001147 A0A286YCN5 57 aa6.7□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Tfpi2O35536 230 aa6.7□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Zfhx3Q61329 3726 aa6.7□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Igkv1-117A0A140T8M0 119 aa6.69□□□□□ -1.34
Col6a1-201ENSMUST00000001147 FlncQ8VHX6 2726 aaKnown RBP6.69□□□□□ -1.34
Col6a1-201ENSMUST00000001147 H2al1aQ5M8Q2 105 aa6.69□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Defb12Q8K4N3 78 aa6.69□□□□□ -1.34
Col6a1-201ENSMUST00000001147 9430015G10RikA2ASP7 199 aa6.69□□□□□ -1.34
Col6a1-201ENSMUST00000001147 NipblQ6KCD5 2798 aaKnown RBP6.68□□□□□ -1.34
Col6a1-201ENSMUST00000001147 9230102O04RikA2ASX7 82 aa6.68□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Lama5Q61001 3718 aa6.68□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Stab1Q8R4Y4 2571 aa6.68□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Klk11Q9QYN3 276 aa6.68□□□□□ -1.34
Col6a1-201ENSMUST00000001147 SnurfQ9WU12 71 aa6.68□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Igkv8-18A0A0B4J1J3 123 aa6.67□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Sox16Q62247 57 aa6.67□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Rpl28P41105 137 aaKnown RBP6.67□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Ighv1-59A0A0A6YXE0 117 aa6.66□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Igkv4-58A0A0G2JGI6 119 aa6.66□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Gm5142Q8C5X9 133 aa6.66□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Nsd1O88491 2588 aaKnown RBP6.66□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Chd9Q8BYH8 2885 aa6.66□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Pde6gP09174 87 aa6.65□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Reg3bP35230 175 aa6.65□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Ufsp1Q9CZP0 217 aa6.65□□□□□ -1.34
Col6a1-201ENSMUST00000001147 CrygaP04345 174 aa6.65□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Sec61gP60060 68 aa6.65□□□□□ -1.34
Col6a1-201ENSMUST00000001147 Trbv13-2A0A140T8N6 113 aa6.65□□□□□ -1.35
Col6a1-201ENSMUST00000001147 BC048502Q80Y74 154 aa6.65□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Rnf152Q8BG47 203 aa6.65□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Zfand2aQ9JII7 171 aa6.65□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Gm10549Q3URY4 149 aa6.64□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Trav14-1A0A0G2JF94 121 aa6.64□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Ube2d4D3YUH6 135 aa6.64□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Dph3Q8K0W9 82 aa6.64□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Gm26661M0QWV4 156 aa6.63□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Camk2n2Q78WH7 79 aa6.63□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Dmbt1Q60997 2085 aa6.63□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Gm17577J3QNF7 156 aa6.63□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Gm37389A0A0A6YW05 95 aa6.62□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Gm9805F6YK59 57 aa6.62□□□□□ -1.35
Col6a1-201ENSMUST00000001147 ScxQ64124 207 aa6.62□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Gpha2Q925Q5 128 aa6.62□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Spink4O35679 86 aa6.62□□□□□ -1.35
Col6a1-201ENSMUST00000001147 CrygfQ9CXV3 174 aa6.62□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Svep1A2AVA0 3567 aa6.62□□□□□ -1.35
Col6a1-201ENSMUST00000001147 D730001G18RikA0A087WQU7 115 aa6.61□□□□□ -1.35
Col6a1-201ENSMUST00000001147 MobpQ9D2P8 170 aa6.61□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Fam19a1Q7TPG8 133 aa6.61□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Cox7b2Q9D2H1 82 aa6.61□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Lypd5Q9D7Z7 256 aa6.61□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Igkv8-26A0A075B5N5 123 aa6.6□□□□□ -1.35
Col6a1-201ENSMUST00000001147 7530416G11RikJ3QJX6 159 aa6.6□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Gm10845Q3UNY9 185 aa6.6□□□□□ -1.35
Col6a1-201ENSMUST00000001147 BaalcQ8VHV1 145 aa6.6□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Esm1Q9QYY7 184 aa6.6□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Gm10772F7AIG4 85 aa6.59□□□□□ -1.35
Col6a1-201ENSMUST00000001147 CrygeQ03740 174 aa6.59□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Odf3l2Q3TZ65 277 aa6.59□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Nf1Q04690 2841 aa6.59□□□□□ -1.35
Col6a1-201ENSMUST00000001147 Gm5153P01627 120 aa6.59□□□□□ -1.35
Col6a1-201ENSMUST00000001147 UqcrqQ9CQ69 82 aa6.59□□□□□ -1.35
Col6a1-201ENSMUST00000001147 H2al1bA0A087WP11 105 aa6.58□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Krtap16-1A2A5X5 502 aa6.58□□□□□ -1.36
Col6a1-201ENSMUST00000001147 H2al1kJ3QP08 105 aa6.58□□□□□ -1.36
Col6a1-201ENSMUST00000001147 H2al1eQ810S6 105 aa6.58□□□□□ -1.36
Col6a1-201ENSMUST00000001147 H2al1mQ9DAD9 105 aa6.58□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Col6a5A6H584 2640 aa6.58□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Nbeal2Q6ZQA0 2742 aa6.58□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Klk9Q32M27 251 aa6.58□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Prr15lQ8JZM2 100 aa6.58□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Celsr2Q9R0M0 2920 aa6.58□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Tep1P97499 2629 aa6.57□□□□□ -1.36
Col6a1-201ENSMUST00000001147 P06320 134 aa6.57□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Ntn5Q3UQ22 452 aa6.57□□□□□ -1.36
Col6a1-201ENSMUST00000001147 LrbaQ9ESE1 2856 aa6.56□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Tcl1b3P56842 122 aa6.56□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Ube2bP63147 152 aa6.56□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Ighv10-1A0A0B4J1J6 119 aa6.55□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Gm3233E9Q2H5 230 aa6.55□□□□□ -1.36
Col6a1-201ENSMUST00000001147 A530084C06RikQ3UTW2 186 aa6.55□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Spint4Q9D263 159 aa6.55□□□□□ -1.36
Col6a1-201ENSMUST00000001147 Pkd1l1Q8R526 2615 aa6.55□□□□□ -1.36
Col6a1-201ENSMUST00000001147 HrnrQ8VHD8 2496 aa6.54□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms