RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Eif4ebp1Q60876 117 aa6.87□□□□□ -1.31
Ldlr-202ENSMUST00000213114 E130114P18RikF6S0S7 154 aa6.87□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Ighv1-62-1A0A075B5U3 116 aa6.87□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Igkv4-78A0A0A6YYE5 119 aa6.87□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Spry2Q9QXV8 315 aa6.87□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Ighv1-5A0A0A6YWG2 117 aa6.86□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Igkv2-109A0A075B5K6 120 aa6.86□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Defb42Q8BVB5 75 aa6.86□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Ormdl1Q921I0 153 aa6.86□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Klk12B2RVZ0 247 aa6.86□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Igkv4-58A0A0G2JGI6 119 aa6.85□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Gm9922Q8C3P1 144 aa6.85□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Ly6hQ9WUC3 139 aa6.85□□□□□ -1.31
Ldlr-202ENSMUST00000213114 CrygfQ9CXV3 174 aa6.85□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Igkv1-122A0A140T8M9 119 aa6.85□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Igkv1-88A0A140T8N1 120 aa6.85□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Vpreb2P13373 142 aa6.85□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Camk2n2Q78WH7 79 aa6.85□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Gm17472A0A075B683 117 aa6.84□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Wfdc15aQ8BH89 80 aa6.84□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Defb12Q8K4N3 78 aa6.84□□□□□ -1.31
Ldlr-202ENSMUST00000213114 2010109I03RikQ9CQ11 111 aa6.84□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Tmem223Q9CQE2 199 aaKnown RBP6.84□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Trav9n-4A0A075B631 113 aa6.83□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Notch1Q01705 2531 aa6.83□□□□□ -1.32
Ldlr-202ENSMUST00000213114 4930546C10RikE9Q4Y3 121 aa6.83□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Ube2d1P61080 147 aaKnown RBP6.83□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Gm5464Q3UY29 175 aa6.83□□□□□ -1.32
Ldlr-202ENSMUST00000213114 CenpwQ3URR0 86 aa6.82□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Psmb11Q8BG41 302 aa6.82□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Pla2g1bQ9Z0Y2 146 aa6.82□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Gm3250E9Q1M3 230 aa6.82□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Gm10300Q8C8P7 189 aa6.82□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Ube2bP63147 152 aa6.82□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Pou2af1Q64693 256 aa6.82□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Krtap27-1E9PX37 202 aa6.82□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Akap13E9Q394 2776 aa6.82□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Cox7b2Q9D2H1 82 aa6.81□□□□□ -1.32
Ldlr-202ENSMUST00000213114 2310009B15RikA0A0A6YWI4 143 aa6.81□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Serp2Q6TAW2 65 aa6.81□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Znf580Q9DB38 172 aa6.81□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Ighv1-61P01749 117 aa6.81□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Chchd7Q8K2Q5 85 aa6.81□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Timm17bQ9Z0V7 172 aa6.81□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Gm10322F7D7I4 111 aa6.8□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Ube2d3P61079 147 aa6.8□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Ube2d2P62838 147 aa6.8□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Cdc42se2Q8BGH7 84 aa6.8□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Fn1P11276 2477 aaKnown RBP6.8□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Ighv1-59A0A0A6YXE0 117 aa6.8□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Spink13Q3UTS8 97 aa6.8□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Rpl18aP62717 176 aaKnown RBP6.8□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Cd164l2Q9D6W7 172 aa6.8□□□□□ -1.32
Ldlr-202ENSMUST00000213114 P01755 137 aa6.79□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Gm3618D3Z4P5 127 aa6.79□□□□□ -1.32
Ldlr-202ENSMUST00000213114 CrygdP04342 174 aa6.79□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Bri3P28662 125 aa6.79□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Ufsp1Q9CZP0 217 aa6.79□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Gm2916Q9D9B9 127 aa6.79□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Mast4Q811L6 2618 aa6.78□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Srsf12Q8C8K3 266 aa6.78□□□□□ -1.32
Ldlr-202ENSMUST00000213114 EnhoQ8K1D8 76 aa6.78□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Ubr5Q80TP3 2792 aa6.78□□□□□ -1.32
Ldlr-202ENSMUST00000213114 1700011M02RikB1AX35 88 aa6.78□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Gm10647E9Q8X0 124 aa6.78□□□□□ -1.32
Ldlr-202ENSMUST00000213114 BC025920Q3US60 128 aa6.77□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Rpl39lQ9CQD0 51 aa6.77□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Cdip1Q9DB75 208 aa6.77□□□□□ -1.32
Ldlr-202ENSMUST00000213114 Ighv8-11A0A075B5X4 119 aa6.77□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Spink4O35679 86 aa6.77□□□□□ -1.33
Ldlr-202ENSMUST00000213114 1700012A03RikQ9DAF1 130 aa6.77□□□□□ -1.33
Ldlr-202ENSMUST00000213114 5730596B20RikQ8BQ08 205 aa6.76□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Ndufc1Q9CQY9 76 aa6.76□□□□□ -1.33
Ldlr-202ENSMUST00000213114 4930535I16RikQ9CUI2 172 aa6.76□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Dchs2A0A0A6YW72 3346 aa6.76□□□□□ -1.33
Ldlr-202ENSMUST00000213114 A0A286YCN5 57 aa6.76□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Stab1Q8R4Y4 2571 aa6.76□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Wfdc12Q9JHY3 85 aa6.76□□□□□ -1.33
Ldlr-202ENSMUST00000213114 SpegQ62407 3262 aa6.75□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Gm17577J3QNF7 156 aa6.75□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Shisa2Q8QZV2 295 aa6.75□□□□□ -1.33
Ldlr-202ENSMUST00000213114 NipblQ6KCD5 2798 aaKnown RBP6.75□□□□□ -1.33
Ldlr-202ENSMUST00000213114 CrygeQ03740 174 aa6.75□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Gm10735Q3US96 136 aa6.75□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Igkv8-26A0A075B5N5 123 aa6.74□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Pde6gP09174 87 aa6.74□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Muc2Q80Z19 2680 aa6.74□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Gm10337F7DEP7 55 aa6.74□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Ly6gP35461 111 aa6.74□□□□□ -1.33
Ldlr-202ENSMUST00000213114 D730001G18RikA0A087WQU7 115 aa6.73□□□□□ -1.33
Ldlr-202ENSMUST00000213114 U90926O08546 118 aa6.73□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Crip2Q9DCT8 208 aaKnown RBP6.73□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Gm9195A0A140LHT4 2805 aa6.73□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Gm10577Q3UDV9 132 aa6.73□□□□□ -1.33
Ldlr-202ENSMUST00000213114 3110070M22RikQ9DAQ7 118 aa6.73□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Gm19935A0A1B0GSF9 52 aa6.73□□□□□ -1.33
Ldlr-202ENSMUST00000213114 4930432M17RikQ3V0W9 174 aa6.73□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Gm10135F6TEE5 83 aa6.72□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Dchs1E9PVD3 3291 aa6.72□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Adgrg4B7ZCC9 3073 aa6.72□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms