RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Igkv3-9A0A140T8P4 119 aa9.21□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Igkv1-99F6XWB2 120 aa9.21□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Lst1O08843 95 aa9.21□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Defb47Q30KN1 79 aa9.21□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 CenpwQ3URR0 86 aa9.21□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Lgals4Q8K419 326 aa9.21□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Brwd1Q921C3 2304 aa9.21□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Hivep3A2A884 2348 aa9.21□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Ighv8-13A0A075B5Y0 101 aa9.2□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Higd2aQ9CQJ1 106 aa9.2□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Cox8cA6H666 72 aa9.19□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Gm10135F6TEE5 83 aa9.19□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 MalO09198 153 aa9.19□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Trav13d-4A0A0G2JFX3 110 aa9.19□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Trav3-1Q5R1I8 114 aa9.19□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Tex15F8VPN2 2785 aa9.19□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 AtrQ9JKK8 2635 aa9.18□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Trav9d-4A0A0G2JG37 103 aa9.18□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Tcl1b3P56842 122 aa9.18□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Cby1Q9D1C2 127 aa9.18□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Phpt1Q9DAK9 124 aa9.18□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Gm29423A0A087WRM1 55 aa9.17□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Gm11020F6ZGD5 61 aa9.17□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Igkv6-13A0A0G2JGY3 119 aa9.17□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Phxr5P08399 672 aa9.17□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Ly6hQ9WUC3 139 aa9.17□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Tenm1Q9WTS4 2731 aa9.16□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Tcl1b5P56845 121 aa9.16□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Hspg2Q05793 3707 aaKnown RBP9.15□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Ighv8-11A0A075B5X4 119 aa9.15□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Prp2P05143 317 aa9.15□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Zc2hc1bQ9D534 172 aa9.15□□□□□ -0.94
Pdlim5-208ENSMUST00000196220 Sigmar1O55242 223 aa9.14□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Rpl28P41105 137 aaKnown RBP9.14□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 PemtQ61907 199 aa9.14□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 4930544G11RikQ9CR99 193 aa9.14□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Notch2O35516 2470 aa9.14□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 PolqQ8CGS6 2544 aa9.14□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 P01755 137 aa9.14□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 SelenowP63300 88 aa9.14□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Eif4ebp3Q80VV3 101 aa9.14□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Gm867A0A1W2P7T4 151 aa9.13□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Tmem86bQ497J1 226 aa9.13□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Trav9n-4A0A075B631 113 aa9.12□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Cryba4Q9JJV0 196 aa9.12□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Cks1bP61025 79 aa9.11□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 9530053A07RikE9PVG8 2581 aa9.11□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Ighv2-9A0A075B5Q5 116 aa9.1□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Ndufa12Q7TMF3 145 aaKnown RBP9.1□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Gm4861Q8C5A4 106 aa9.1□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 SpinklQ8CEK3 90 aa9.1□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Fn1P11276 2477 aaKnown RBP9.09□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Gm10647E9Q8X0 124 aa9.09□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Gm9903Q8C9Y8 129 aa9.09□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Ube2wQ8VDW4 151 aa9.09□□□□□ -0.95
Pdlim5-208ENSMUST00000196220 Prss58Q8BW11 241 aa9.08□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Pfn2Q9JJV2 140 aa9.08□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Igkv8-34A0A0G2JDU0 121 aa9.08□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Acyp1P56376 99 aa9.08□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Csdc2Q91YQ3 154 aa9.08□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 2010109I03RikQ9CQ11 111 aa9.08□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Q9DAQ5 155 aa9.08□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Cdip1Q9DB75 208 aa9.08□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Gm28269A0A087WSG3 125 aa9.07□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Smim26Q3V460 107 aa9.07□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Dppa2Q9CWH0 301 aa9.07□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Igkv3-1A0A075B5P1 119 aa9.06□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Ighv1-56A0A0A6YXG2 117 aa9.06□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 B230359F08RikA0A0B4J1K3 109 aa9.06□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 6430550D23RikE9Q1X6 194 aa9.06□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Stab1Q8R4Y4 2571 aa9.06□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Igkv1-117A0A140T8M0 119 aa9.05□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Gm16381A0A1Y7VKT9 73 aa9.05□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 1700020N15RikL7MTX3 112 aa9.05□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Bles03Q8VD62 251 aa9.05□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Spata3Q9D9T6 193 aa9.05□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Gm11213A0A1B0GR83 88 aa9.05□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Gm16181B0V2H2 73 aa9.05□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Insl3O09107 122 aa9.05□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Kmt2aP55200 3966 aa9.05□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 4930556J24RikQ9D4U7 146 aa9.05□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Xlr5cQ9JJR2 179 aa9.05□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Hivep1Q03172 2688 aa9.04□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 FlnbQ80X90 2602 aaKnown RBP9.04□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 E130208F15RikQ3UPV3 143 aa9.04□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 EnhoQ8K1D8 76 aa9.04□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Lyrm7Q9DA03 104 aa9.04□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 P01819 144 aa9.03□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Snhg11Q4G0K9 87 aa9.03□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Dnal4Q9DCM4 105 aa9.03□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Igkv8-18A0A0B4J1J3 123 aa9.02□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Krtap11-1E9Q2E9 183 aa9.02□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 C530025M09RikF6RGA8 229 aa9.02□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Pglyrp4Q0VB07 374 aa9.02□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 Gm5617Q91VN2 117 aa9.02□□□□□ -0.96
Pdlim5-208ENSMUST00000196220 P01896 185 aa9.02□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Wfdc17Q5SSJ1 76 aa9.02□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Cox7bP56393 80 aa9.01□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Gm10767Q3TQP0 103 aa9.01□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 2310009B15RikA0A0A6YWI4 143 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 70.7 ms