RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Pip4p1Q3TWL2 284 aa8.94□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Shisa2Q8QZV2 295 aa8.94□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Tm2d2Q8R0I4 213 aa8.94□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Trav13-4-dv7A0A075B6C2 110 aa8.93□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Stab1Q8R4Y4 2571 aa8.93□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Ighv1-62-1A0A075B5U3 116 aa8.93□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Igkv4-78A0A0A6YYE5 119 aa8.93□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 MsmbO08540 113 aa8.93□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 E130116L18RikQ8BMV6 101 aa8.93□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Gm7075D3Z497 112 aa8.93□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Fhl2O70433 279 aa8.93□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Leap2Q91V13 76 aa8.92□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Trav13-1A0A075B644 110 aa8.92□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Pla2g2dQ9WVF6 144 aa8.92□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Nsd1O88491 2588 aaKnown RBP8.92□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Trav9-2A0A075B647 113 aa8.91□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Ighv2-3A0A075B696 115 aa8.91□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Trav9-4A0A0B4J1K2 113 aa8.91□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Gm28374F6SG70 93 aa8.91□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 4930519P11RikQ9CUJ8 166 aa8.91□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Synj2bpQ9D6K5 145 aa8.91□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Trav9n-2A0A0G2JDP3 113 aa8.91□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Ube2d4D3YUH6 135 aa8.91□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Fxyd5P97808 178 aa8.91□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Defb18Q30KP5 85 aa8.9□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Igkv4-62A0A0G2JDW9 117 aa8.9□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Gm15557A6PWY0 234 aa8.9□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Dph3Q8K0W9 82 aa8.9□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Gm10490F6VBM2 120 aa8.9□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Prh1P05142 261 aa8.9□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Lmo4P61969 165 aa8.9□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Igkv1-117A0A140T8M0 119 aa8.89□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Gm37988J3QM41 62 aa8.89□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Reg3gO09049 174 aa8.89□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 1810032O08RikE9PZV8 113 aa8.89□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Gm37389A0A0A6YW05 95 aa8.89□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Krtap16-1A2A5X5 502 aa8.89□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Gm3250E9Q1M3 230 aa8.89□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Igkv4-79A0A075B5L8 119 aa8.88□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 B230217C12RikE9Q3Z1 139 aa8.88□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Gm9925F6T2U3 160 aa8.88□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Nbeal2Q6ZQA0 2742 aa8.88□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Vmo1Q5SXG7 201 aa8.88□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Trbv13-2A0A140T8N6 113 aa8.87□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Gm10577Q3UDV9 132 aa8.87□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Sslp1Q3UN54 99 aa8.87□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Tomm7Q9D173 55 aa8.87□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Krtap27-1E9PX37 202 aa8.87□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Gm5153P01627 120 aa8.87□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 BaalcQ8VHV1 145 aa8.87□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Serp1Q9Z1W5 66 aa8.87□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Ighv2-7A0A075B5Q8 116 aa8.87□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Rnf152Q8BG47 203 aa8.87□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Chd9Q8BYH8 2885 aa8.86□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Gm815Q3UWS2 115 aa8.86□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Rpl39lQ9CQD0 51 aa8.86□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Col6a5A6H584 2640 aa8.86□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Ntn5Q3UQ22 452 aa8.86□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Ormdl1Q921I0 153 aa8.86□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Klk12B2RVZ0 247 aa8.85□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Gm10322F7D7I4 111 aa8.85□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Spink8Q09TK9 105 aa8.85□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 A530084C06RikQ3UTW2 186 aa8.85□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Gm11213A0A1B0GR83 88 aa8.85□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 NipblQ6KCD5 2798 aaKnown RBP8.85□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Gm10549Q3URY4 149 aa8.84□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Zfhx3Q61329 3726 aa8.84□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 Sec61gP60060 68 aa8.84□□□□□ -0.99
Pcdh1-202ENSMUST00000159405 P01755 137 aa8.83□□□□□ -1
Pcdh1-202ENSMUST00000159405 Fam229bQ8CF36 80 aa8.83□□□□□ -1
Pcdh1-202ENSMUST00000159405 Dmbt1Q60997 2085 aa8.83□□□□□ -1
Pcdh1-202ENSMUST00000159405 Igfn1Q3KNY0 2849 aa8.83□□□□□ -1
Pcdh1-202ENSMUST00000159405 P01738 130 aa8.83□□□□□ -1
Pcdh1-202ENSMUST00000159405 Cox17P56394 63 aa8.83□□□□□ -1
Pcdh1-202ENSMUST00000159405 Trav13d-4A0A0G2JFX3 110 aa8.82□□□□□ -1
Pcdh1-202ENSMUST00000159405 Crlf1Q9JM58 425 aa8.82□□□□□ -1
Pcdh1-202ENSMUST00000159405 Ighv1-49A0A0A6YWX2 117 aa8.82□□□□□ -1
Pcdh1-202ENSMUST00000159405 4930546C10RikE9Q4Y3 121 aa8.82□□□□□ -1
Pcdh1-202ENSMUST00000159405 Lamtor3O88653 124 aa8.82□□□□□ -1
Pcdh1-202ENSMUST00000159405 4930556J24RikQ9D4U7 146 aa8.82□□□□□ -1
Pcdh1-202ENSMUST00000159405 Vpreb2P13373 142 aa8.81□□□□□ -1
Pcdh1-202ENSMUST00000159405 Pla2g2cP48076 150 aa8.81□□□□□ -1
Pcdh1-202ENSMUST00000159405 Znf414Q9DCK4 299 aa8.81□□□□□ -1
Pcdh1-202ENSMUST00000159405 Igkv4-69A0A0B4J1I6 116 aa8.81□□□□□ -1
Pcdh1-202ENSMUST00000159405 Cd99Q8VCN6 175 aa8.81□□□□□ -1
Pcdh1-202ENSMUST00000159405 FlncQ8VHX6 2726 aaKnown RBP8.81□□□□□ -1
Pcdh1-202ENSMUST00000159405 Fam19a3Q7TPG6 132 aa8.8□□□□□ -1
Pcdh1-202ENSMUST00000159405 Ifitm6A0A1B0GS75 124 aa8.8□□□□□ -1
Pcdh1-202ENSMUST00000159405 Igkv1-99F6XWB2 120 aa8.8□□□□□ -1
Pcdh1-202ENSMUST00000159405 P01745 121 aa8.8□□□□□ -1
Pcdh1-202ENSMUST00000159405 Trav9d-3A0A075B695 113 aa8.8□□□□□ -1
Pcdh1-202ENSMUST00000159405 Gm10509O88255 85 aa8.8□□□□□ -1
Pcdh1-202ENSMUST00000159405 Trank1Q8BV79 2999 aa8.8□□□□□ -1
Pcdh1-202ENSMUST00000159405 Ucn2Q99ML8 113 aa8.8□□□□□ -1
Pcdh1-202ENSMUST00000159405 Bean1Q9EQG5 255 aa8.8□□□□□ -1
Pcdh1-202ENSMUST00000159405 Ighv1-63A0A075B5X2 117 aa8.79□□□□□ -1
Pcdh1-202ENSMUST00000159405 Trav13-2A0A075B649 110 aa8.79□□□□□ -1
Pcdh1-202ENSMUST00000159405 E130218I03RikA0A0U1RNU5 63 aa8.79□□□□□ -1
Pcdh1-202ENSMUST00000159405 Pou2af1Q64693 256 aa8.79□□□□□ -1
Pcdh1-202ENSMUST00000159405 Dad1P61804 113 aa8.79□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 102.5 ms