RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Ighv2-9-1A0A075B697 116 aa12.79□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Igf2rQ07113 2483 aaKnown RBP12.79□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Csdc2Q91YQ3 154 aa12.79□□□□□ -0.36
Pcf11-201ENSMUST00000119954 AvpP35455 168 aa12.78□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Wfdc17Q5SSJ1 76 aa12.78□□□□□ -0.36
Pcf11-201ENSMUST00000119954 2310009B15RikA0A0A6YWI4 143 aa12.78□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Gm10509O88255 85 aa12.78□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Gpha2Q925Q5 128 aa12.77□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Vwa8Q8CC88 1905 aa12.77□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Spint4Q9D263 159 aa12.76□□□□□ -0.37
Pcf11-201ENSMUST00000119954 AgrnA2ASQ1 1950 aa12.76□□□□□ -0.37
Pcf11-201ENSMUST00000119954 Anapc1P53995 1944 aaKnown RBP12.75□□□□□ -0.37
Pcf11-201ENSMUST00000119954 AcanQ61282 2132 aaKnown RBP12.75□□□□□ -0.37
Pcf11-201ENSMUST00000119954 Gm5153P01627 120 aa12.75□□□□□ -0.37
Pcf11-201ENSMUST00000119954 Gm10570F6VB42 170 aa12.75□□□□□ -0.37
Pcf11-201ENSMUST00000119954 MgamB5THE2 1827 aa12.74□□□□□ -0.37
Pcf11-201ENSMUST00000119954 Rp1l1Q8CGM2 1859 aa12.74□□□□□ -0.37
Pcf11-201ENSMUST00000119954 Gm10135F6TEE5 83 aa12.74□□□□□ -0.37
Pcf11-201ENSMUST00000119954 Defb2P82020 71 aa12.73□□□□□ -0.37
Pcf11-201ENSMUST00000119954 Bean1Q9EQG5 255 aa12.73□□□□□ -0.37
Pcf11-201ENSMUST00000119954 CrygfQ9CXV3 174 aa12.72□□□□□ -0.37
Pcf11-201ENSMUST00000119954 Spink13Q3UTS8 97 aa12.71□□□□□ -0.38
Pcf11-201ENSMUST00000119954 DysfQ9ESD7 2090 aa12.7□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Igkv8-19A0A0G2JFN8 121 aa12.7□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Defb42Q8BVB5 75 aa12.7□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Cd164Q9R0L9 197 aa12.69□□□□□ -0.38
Pcf11-201ENSMUST00000119954 C2cd3Q52KB6 2323 aa12.69□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Dennd4cA6H8H2 1906 aa12.69□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Fer1l4A3KGK3 1992 aa12.69□□□□□ -0.38
Pcf11-201ENSMUST00000119954 HelzQ6DFV5 1964 aaKnown RBP12.69□□□□□ -0.38
Pcf11-201ENSMUST00000119954 CrygeQ03740 174 aa12.69□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Gm10549Q3URY4 149 aa12.69□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Coa6Q8BGD8 79 aa12.69□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Pcnx2Q5DU28 2122 aa12.68□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Notch4P31695 1964 aa12.68□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Cdip1Q9DB75 208 aa12.68□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Gm10197F6QEY5 67 aa12.68□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Gm9767G3X930 207 aa12.67□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Smr3aQ61900 147 aa12.67□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Dopey1Q8BL99 2399 aa12.67□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Ntn5Q3UQ22 452 aa12.67□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Kif26aQ52KG5 1881 aa12.67□□□□□ -0.38
Pcf11-201ENSMUST00000119954 B430305J03RikQ8BQQ8 176 aa12.67□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Cspg4Q8VHY0 2327 aa12.67□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Col24a1Q30D77 1733 aa12.67□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Defb39Q70KL3 74 aa12.66□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Nav2E9Q842 2432 aa12.66□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Gm9922Q8C3P1 144 aa12.66□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Plxnb3Q9QY40 1902 aa12.65□□□□□ -0.38
Pcf11-201ENSMUST00000119954 Hivep3A2A884 2348 aa12.65□□□□□ -0.38
Pcf11-201ENSMUST00000119954 1700056E22RikF7CNM6 234 aa12.63□□□□□ -0.39
Pcf11-201ENSMUST00000119954 Krtap27-1E9PX37 202 aa12.63□□□□□ -0.39
Pcf11-201ENSMUST00000119954 1110002E22RikE0CYV9 1786 aa12.63□□□□□ -0.39
Pcf11-201ENSMUST00000119954 Bri3P28662 125 aa12.62□□□□□ -0.39
Pcf11-201ENSMUST00000119954 4930518I15RikQ3V2W7 57 aa12.62□□□□□ -0.39
Pcf11-201ENSMUST00000119954 4930519P11RikQ9CUJ8 166 aa12.62□□□□□ -0.39
Pcf11-201ENSMUST00000119954 PtprsB0V2N1 1907 aa12.61□□□□□ -0.39
Pcf11-201ENSMUST00000119954 B230217C12RikE9Q3Z1 139 aa12.61□□□□□ -0.39
Pcf11-201ENSMUST00000119954 Ighv1-56A0A0A6YXG2 117 aa12.61□□□□□ -0.39
Pcf11-201ENSMUST00000119954 Gm17509Q9CZ61 145 aa12.6□□□□□ -0.39
Pcf11-201ENSMUST00000119954 Pla2g2cP48076 150 aa12.59□□□□□ -0.39
Pcf11-201ENSMUST00000119954 Gm12216A0A1W2P827 62 aa12.59□□□□□ -0.39
Pcf11-201ENSMUST00000119954 Arhgap32Q811P8 2089 aa12.58□□□□□ -0.4
Pcf11-201ENSMUST00000119954 Tanc2A2A690 1994 aa12.58□□□□□ -0.4
Pcf11-201ENSMUST00000119954 Rps28P62858 69 aaKnown RBP12.58□□□□□ -0.4
Pcf11-201ENSMUST00000119954 D730001G18RikA0A087WQU7 115 aa12.57□□□□□ -0.4
Pcf11-201ENSMUST00000119954 Crip3Q6Q6R3 243 aa12.56□□□□□ -0.4
Pcf11-201ENSMUST00000119954 Spg11Q3UHA3 2430 aa12.55□□□□□ -0.4
Pcf11-201ENSMUST00000119954 Gm28230A0A0A0MQ91 144 aa12.55□□□□□ -0.4
Pcf11-201ENSMUST00000119954 Gm10160F6Y577 67 aa12.53□□□□□ -0.4
Pcf11-201ENSMUST00000119954 Nav3Q80TN7 2359 aa12.52□□□□□ -0.41
Pcf11-201ENSMUST00000119954 A530084C06RikQ3UTW2 186 aa12.51□□□□□ -0.41
Pcf11-201ENSMUST00000119954 Reg3aO09037 175 aa12.51□□□□□ -0.41
Pcf11-201ENSMUST00000119954 Q9DAA7 145 aa12.51□□□□□ -0.41
Pcf11-201ENSMUST00000119954 Gm17606F6ZL36 78 aa12.5□□□□□ -0.41
Pcf11-201ENSMUST00000119954 Ighv2-9A0A075B5Q5 116 aa12.5□□□□□ -0.41
Pcf11-201ENSMUST00000119954 Zfand2aQ9JII7 171 aa12.49□□□□□ -0.41
Pcf11-201ENSMUST00000119954 NbasE9Q411 2356 aa12.49□□□□□ -0.41
Pcf11-201ENSMUST00000119954 AcacbE9Q4Z2 2448 aa12.48□□□□□ -0.41
Pcf11-201ENSMUST00000119954 Limd2Q8BGB5 128 aa12.47□□□□□ -0.41
Pcf11-201ENSMUST00000119954 Ighv2-5A0A0A6YY69 116 aa12.47□□□□□ -0.41
Pcf11-201ENSMUST00000119954 BC025920Q3US60 128 aa12.47□□□□□ -0.41
Pcf11-201ENSMUST00000119954 PtprqP0C5E4 2300 aa12.47□□□□□ -0.41
Pcf11-201ENSMUST00000119954 Rtl10D3YWW5 146 aa12.46□□□□□ -0.41
Pcf11-201ENSMUST00000119954 Q9DAB9 146 aa12.46□□□□□ -0.41
Pcf11-201ENSMUST00000119954 A930009A15RikG3UYI6 118 aa12.46□□□□□ -0.41
Pcf11-201ENSMUST00000119954 Sostdc1Q9CQN4 206 aa12.46□□□□□ -0.42
Pcf11-201ENSMUST00000119954 Ighv8-13A0A075B5Y0 101 aa12.46□□□□□ -0.42
Pcf11-201ENSMUST00000119954 Nup210Q9QY81 1886 aaKnown RBP12.45□□□□□ -0.42
Pcf11-201ENSMUST00000119954 Mrpl34Q99N91 92 aa12.45□□□□□ -0.42
Pcf11-201ENSMUST00000119954 Col4a6B1AVK5 1691 aa12.45□□□□□ -0.42
Pcf11-201ENSMUST00000119954 Gm16485Q8C4B7 115 aa12.45□□□□□ -0.42
Pcf11-201ENSMUST00000119954 Tet2Q4JK59 1912 aaKnown RBP12.45□□□□□ -0.42
Pcf11-201ENSMUST00000119954 A730009L09RikA0A1B0GS82 72 aa12.44□□□□□ -0.42
Pcf11-201ENSMUST00000119954 6430550D23RikE9Q1X6 194 aa12.44□□□□□ -0.42
Pcf11-201ENSMUST00000119954 Krtap16-1A2A5X5 502 aa12.44□□□□□ -0.42
Pcf11-201ENSMUST00000119954 Odf3l2Q3TZ65 277 aa12.43□□□□□ -0.42
Pcf11-201ENSMUST00000119954 P01819 144 aa12.43□□□□□ -0.42
Pcf11-201ENSMUST00000119954 Znf575Q3TXZ1 239 aa12.43□□□□□ -0.42
Pcf11-201ENSMUST00000119954 Gm3443F7CCV5 94 aa12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 106 ms