RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Tmem223Q9CQE2 199 aaKnown RBP16.72■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Vmo1Q5SXG7 201 aa16.72■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Atp5g1Q9CR84 136 aa16.72■□□□□ 0.27
Ubp1-203ENSMUST00000116492 4930544G11RikQ9CR99 193 aa16.72■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Trav7-6A0A075B640 112 aa16.71■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Trav13d-4A0A0G2JFX3 110 aa16.71■□□□□ 0.27
Ubp1-203ENSMUST00000116492 SelenowP63300 88 aa16.71■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Setd2E9Q5F9 2537 aa16.69■□□□□ 0.26
Ubp1-203ENSMUST00000116492 Sprr1bQ62267 153 aa16.69■□□□□ 0.26
Ubp1-203ENSMUST00000116492 A830031A19RikQ8BNT5 113 aa16.69■□□□□ 0.26
Ubp1-203ENSMUST00000116492 SpinklQ8CEK3 90 aa16.69■□□□□ 0.26
Ubp1-203ENSMUST00000116492 Cks1bP61025 79 aa16.69■□□□□ 0.26
Ubp1-203ENSMUST00000116492 Gm904Q3V2L5 102 aa16.69■□□□□ 0.26
Ubp1-203ENSMUST00000116492 MrapQ9D159 127 aa16.69■□□□□ 0.26
Ubp1-203ENSMUST00000116492 Myo18bE9PV66 2605 aa16.68■□□□□ 0.26
Ubp1-203ENSMUST00000116492 Akap13E9Q394 2776 aa16.68■□□□□ 0.26
Ubp1-203ENSMUST00000116492 PrcdQ00LT2 53 aa16.68■□□□□ 0.26
Ubp1-203ENSMUST00000116492 2310009B15RikA0A0A6YWI4 143 aa16.67■□□□□ 0.26
Ubp1-203ENSMUST00000116492 PemtQ61907 199 aa16.67■□□□□ 0.26
Ubp1-203ENSMUST00000116492 Gm3233E9Q2H5 230 aa16.66■□□□□ 0.26
Ubp1-203ENSMUST00000116492 Dand5Q76LW6 185 aa16.66■□□□□ 0.26
Ubp1-203ENSMUST00000116492 Leap2Q91V13 76 aa16.66■□□□□ 0.26
Ubp1-203ENSMUST00000116492 1700020N15RikL7MTX3 112 aa16.66■□□□□ 0.26
Ubp1-203ENSMUST00000116492 P01755 137 aa16.66■□□□□ 0.26
Ubp1-203ENSMUST00000116492 Hspg2Q05793 3707 aaKnown RBP16.66■□□□□ 0.26
Ubp1-203ENSMUST00000116492 Gm10767Q3TQP0 103 aa16.65■□□□□ 0.26
Ubp1-203ENSMUST00000116492 Wdr38Q9D994 303 aa16.64■□□□□ 0.25
Ubp1-203ENSMUST00000116492 Foxc1Q61572 553 aa16.64■□□□□ 0.25
Ubp1-203ENSMUST00000116492 D730001G18RikA0A087WQU7 115 aa16.63■□□□□ 0.25
Ubp1-203ENSMUST00000116492 Ighv2-9-1A0A075B697 116 aa16.63■□□□□ 0.25
Ubp1-203ENSMUST00000116492 Gm10647E9Q8X0 124 aa16.63■□□□□ 0.25
Ubp1-203ENSMUST00000116492 Rpl28P41105 137 aaKnown RBP16.63■□□□□ 0.25
Ubp1-203ENSMUST00000116492 Pfn2Q9JJV2 140 aa16.63■□□□□ 0.25
Ubp1-203ENSMUST00000116492 Igkv1-99F6XWB2 120 aa16.62■□□□□ 0.25
Ubp1-203ENSMUST00000116492 Xlr5cQ9JJR2 179 aa16.61■□□□□ 0.25
Ubp1-203ENSMUST00000116492 Dad1P61804 113 aa16.61■□□□□ 0.25
Ubp1-203ENSMUST00000116492 Trbv13-2A0A140T8N6 113 aa16.6■□□□□ 0.25
Ubp1-203ENSMUST00000116492 Ndufa12Q7TMF3 145 aaKnown RBP16.6■□□□□ 0.25
Ubp1-203ENSMUST00000116492 CicQ924A2 2510 aa16.59■□□□□ 0.25
Ubp1-203ENSMUST00000116492 Igkv6-13A0A0G2JGY3 119 aa16.59■□□□□ 0.25
Ubp1-203ENSMUST00000116492 Znf740Q6NZQ6 180 aa16.59■□□□□ 0.25
Ubp1-203ENSMUST00000116492 B230359F08RikA0A0B4J1K3 109 aa16.58■□□□□ 0.24
Ubp1-203ENSMUST00000116492 Mzt1Q8BUR9 78 aa16.58■□□□□ 0.24
Ubp1-203ENSMUST00000116492 Anapc13Q8R034 74 aa16.58■□□□□ 0.24
Ubp1-203ENSMUST00000116492 Lyrm7Q9DA03 104 aa16.56■□□□□ 0.24
Ubp1-203ENSMUST00000116492 Esm1Q9QYY7 184 aa16.55■□□□□ 0.24
Ubp1-203ENSMUST00000116492 Igkv1-117A0A140T8M0 119 aa16.55■□□□□ 0.24
Ubp1-203ENSMUST00000116492 Bles03Q8VD62 251 aa16.55■□□□□ 0.24
Ubp1-203ENSMUST00000116492 Igkv3-9A0A140T8P4 119 aa16.54■□□□□ 0.24
Ubp1-203ENSMUST00000116492 Tmem213Q08EA8 116 aa16.54■□□□□ 0.24
Ubp1-203ENSMUST00000116492 Higd2aQ9CQJ1 106 aa16.52■□□□□ 0.23
Ubp1-203ENSMUST00000116492 Brwd1Q921C3 2304 aa16.51■□□□□ 0.23
Ubp1-203ENSMUST00000116492 TeppQ6IMH0 216 aa16.51■□□□□ 0.23
Ubp1-203ENSMUST00000116492 Fbn1Q61554 2873 aaKnown RBP16.51■□□□□ 0.23
Ubp1-203ENSMUST00000116492 Prss58Q8BW11 241 aa16.49■□□□□ 0.23
Ubp1-203ENSMUST00000116492 Trav9n-4A0A075B631 113 aa16.48■□□□□ 0.23
Ubp1-203ENSMUST00000116492 Tcl1b3P56842 122 aa16.48■□□□□ 0.23
Ubp1-203ENSMUST00000116492 Gm16381A0A1Y7VKT9 73 aa16.48■□□□□ 0.23
Ubp1-203ENSMUST00000116492 Tenm4Q3UHK6 2771 aa16.47■□□□□ 0.23
Ubp1-203ENSMUST00000116492 Acyp1P56376 99 aa16.47■□□□□ 0.23
Ubp1-203ENSMUST00000116492 Pglyrp4Q0VB07 374 aa16.47■□□□□ 0.23
Ubp1-203ENSMUST00000116492 Tmem86bQ497J1 226 aa16.46■□□□□ 0.23
Ubp1-203ENSMUST00000116492 4930524J08RikQ9CUJ5 163 aa16.46■□□□□ 0.23
Ubp1-203ENSMUST00000116492 Defb29Q8BGW9 78 aa16.44■□□□□ 0.22
Ubp1-203ENSMUST00000116492 Klk11Q9QYN3 276 aa16.44■□□□□ 0.22
Ubp1-203ENSMUST00000116492 Prh1P05142 261 aa16.43■□□□□ 0.22
Ubp1-203ENSMUST00000116492 Znf414Q9DCK4 299 aa16.43■□□□□ 0.22
Ubp1-203ENSMUST00000116492 Smim26Q3V460 107 aa16.43■□□□□ 0.22
Ubp1-203ENSMUST00000116492 Spry2Q9QXV8 315 aa16.43■□□□□ 0.22
Ubp1-203ENSMUST00000116492 Ighv8-13A0A075B5Y0 101 aa16.42■□□□□ 0.22
Ubp1-203ENSMUST00000116492 Trav13-1A0A075B644 110 aa16.42■□□□□ 0.22
Ubp1-203ENSMUST00000116492 Gm867A0A1W2P7T4 151 aa16.42■□□□□ 0.22
Ubp1-203ENSMUST00000116492 5730596B20RikQ8BQ08 205 aa16.42■□□□□ 0.22
Ubp1-203ENSMUST00000116492 Dnal4Q9DCM4 105 aa16.42■□□□□ 0.22
Ubp1-203ENSMUST00000116492 Ighv1-56A0A0A6YXG2 117 aa16.41■□□□□ 0.22
Ubp1-203ENSMUST00000116492 Igkv1-35A0A0G2JDE5 120 aa16.39■□□□□ 0.21
Ubp1-203ENSMUST00000116492 C530025M09RikF6RGA8 229 aa16.39■□□□□ 0.21
Ubp1-203ENSMUST00000116492 Tcl1b5P56845 121 aa16.38■□□□□ 0.21
Ubp1-203ENSMUST00000116492 Atp5eP56382 52 aa16.37■□□□□ 0.21
Ubp1-203ENSMUST00000116492 Nbeal2Q6ZQA0 2742 aa16.37■□□□□ 0.21
Ubp1-203ENSMUST00000116492 Hivep3A2A884 2348 aa16.37■□□□□ 0.21
Ubp1-203ENSMUST00000116492 Ighv8-11A0A075B5X4 119 aa16.36■□□□□ 0.21
Ubp1-203ENSMUST00000116492 Igkv8-18A0A0B4J1J3 123 aa16.36■□□□□ 0.21
Ubp1-203ENSMUST00000116492 Gm5142Q8C5X9 133 aa16.35■□□□□ 0.21
Ubp1-203ENSMUST00000116492 Trav3-4A0A075B654 114 aa16.34■□□□□ 0.21
Ubp1-203ENSMUST00000116492 Csdc2Q91YQ3 154 aa16.34■□□□□ 0.21
Ubp1-203ENSMUST00000116492 Xcl1P47993 114 aa16.34■□□□□ 0.21
Ubp1-203ENSMUST00000116492 Tex15F8VPN2 2785 aa16.34■□□□□ 0.21
Ubp1-203ENSMUST00000116492 Gm5153P01627 120 aa16.33■□□□□ 0.21
Ubp1-203ENSMUST00000116492 Ighv2-9A0A075B5Q5 116 aa16.33■□□□□ 0.2
Ubp1-203ENSMUST00000116492 Krtap11-1E9Q2E9 183 aa16.33■□□□□ 0.2
Ubp1-203ENSMUST00000116492 E130114P18RikF6S0S7 154 aa16.33■□□□□ 0.2
Ubp1-203ENSMUST00000116492 Trav14d-3-dv8A0A075B619 120 aa16.32■□□□□ 0.2
Ubp1-203ENSMUST00000116492 4930556J24RikQ9D4U7 146 aa16.32■□□□□ 0.2
Ubp1-203ENSMUST00000116492 Gm10251J3QPM5 127 aa16.31■□□□□ 0.2
Ubp1-203ENSMUST00000116492 P01819 144 aa16.31■□□□□ 0.2
Ubp1-203ENSMUST00000116492 SvipQ3UZP4 77 aa16.31■□□□□ 0.2
Ubp1-203ENSMUST00000116492 Gm9903Q8C9Y8 129 aa16.31■□□□□ 0.2
Ubp1-203ENSMUST00000116492 Trav13n-2A0A0G2JF93 110 aa16.31■□□□□ 0.2
Ubp1-203ENSMUST00000116492 Trav13-2A0A075B649 110 aa16.3■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 84.2 ms