RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Ighv2-9-1A0A075B697 116 aa11.3□□□□□ -0.6
Shank1-201ENSMUST00000107934 Wdr38Q9D994 303 aa11.3□□□□□ -0.6
Shank1-201ENSMUST00000107934 Adm2Q7TNK8 150 aa11.3□□□□□ -0.6
Shank1-201ENSMUST00000107934 Igkv3-7A0A0G2JE31 119 aa11.29□□□□□ -0.6
Shank1-201ENSMUST00000107934 Lrp4Q8VI56 1905 aa11.29□□□□□ -0.6
Shank1-201ENSMUST00000107934 Gm5464Q3UY29 175 aa11.29□□□□□ -0.6
Shank1-201ENSMUST00000107934 TeppQ6IMH0 216 aa11.29□□□□□ -0.6
Shank1-201ENSMUST00000107934 B430305J03RikQ8BQQ8 176 aa11.29□□□□□ -0.6
Shank1-201ENSMUST00000107934 Prr9Q8BV84 116 aa11.29□□□□□ -0.6
Shank1-201ENSMUST00000107934 Igkv8-28A0A0G2JE47 121 aa11.29□□□□□ -0.6
Shank1-201ENSMUST00000107934 Dopey1Q8BL99 2399 aa11.28□□□□□ -0.6
Shank1-201ENSMUST00000107934 Cspg4Q8VHY0 2327 aa11.28□□□□□ -0.6
Shank1-201ENSMUST00000107934 Ighv8-13A0A075B5Y0 101 aa11.28□□□□□ -0.6
Shank1-201ENSMUST00000107934 Kiaa1549Q68FD9 1940 aa11.28□□□□□ -0.6
Shank1-201ENSMUST00000107934 Trav14-1A0A0G2JF94 121 aa11.28□□□□□ -0.6
Shank1-201ENSMUST00000107934 P84750 121 aa11.27□□□□□ -0.61
Shank1-201ENSMUST00000107934 Krtap27-1E9PX37 202 aa11.27□□□□□ -0.61
Shank1-201ENSMUST00000107934 Col27a1Q5QNQ9 1845 aa11.27□□□□□ -0.61
Shank1-201ENSMUST00000107934 4930556J24RikQ9D4U7 146 aa11.27□□□□□ -0.61
Shank1-201ENSMUST00000107934 A0A286YE49 62 aa11.26□□□□□ -0.61
Shank1-201ENSMUST00000107934 BtcQ05928 177 aa11.26□□□□□ -0.61
Shank1-201ENSMUST00000107934 Col4a2P08122 1707 aa11.26□□□□□ -0.61
Shank1-201ENSMUST00000107934 Wnk1P83741 2377 aa11.26□□□□□ -0.61
Shank1-201ENSMUST00000107934 Gm28374F6SG70 93 aa11.25□□□□□ -0.61
Shank1-201ENSMUST00000107934 Gvin1Q80SU7 2427 aa11.24□□□□□ -0.61
Shank1-201ENSMUST00000107934 Prrc2aQ7TSC1 2158 aaKnown RBP11.24□□□□□ -0.61
Shank1-201ENSMUST00000107934 Apoc4Q61268 124 aa11.24□□□□□ -0.61
Shank1-201ENSMUST00000107934 SrarpQ3ULG3 163 aa11.23□□□□□ -0.61
Shank1-201ENSMUST00000107934 Gm17509Q9CZ61 145 aa11.23□□□□□ -0.61
Shank1-201ENSMUST00000107934 Spg11Q3UHA3 2430 aa11.22□□□□□ -0.61
Shank1-201ENSMUST00000107934 Gm16485Q8C4B7 115 aa11.22□□□□□ -0.61
Shank1-201ENSMUST00000107934 Ifitm6A0A1B0GS75 124 aa11.21□□□□□ -0.61
Shank1-201ENSMUST00000107934 Wfdc6bF6ULY1 148 aa11.21□□□□□ -0.61
Shank1-201ENSMUST00000107934 H2al1mQ9DAD9 105 aa11.2□□□□□ -0.62
Shank1-201ENSMUST00000107934 Ighv2-9A0A075B5Q5 116 aa11.2□□□□□ -0.62
Shank1-201ENSMUST00000107934 NpwA0A1L1STR8 176 aa11.2□□□□□ -0.62
Shank1-201ENSMUST00000107934 Ndufb1P0DN34 57 aa11.19□□□□□ -0.62
Shank1-201ENSMUST00000107934 CdsnQ7TPC1 561 aa11.18□□□□□ -0.62
Shank1-201ENSMUST00000107934 Gm10300Q8C8P7 189 aa11.18□□□□□ -0.62
Shank1-201ENSMUST00000107934 Gm10267M0QWD8 85 aa11.18□□□□□ -0.62
Shank1-201ENSMUST00000107934 Pcnx2Q5DU28 2122 aa11.18□□□□□ -0.62
Shank1-201ENSMUST00000107934 Gm5142Q8C5X9 133 aa11.17□□□□□ -0.62
Shank1-201ENSMUST00000107934 Serp2Q6TAW2 65 aa11.17□□□□□ -0.62
Shank1-201ENSMUST00000107934 Crip2Q9DCT8 208 aaKnown RBP11.17□□□□□ -0.62
Shank1-201ENSMUST00000107934 C130032M10RikQ8C888 123 aa11.17□□□□□ -0.62
Shank1-201ENSMUST00000107934 Q9DAB9 146 aa11.16□□□□□ -0.62
Shank1-201ENSMUST00000107934 Pla2g2eQ9QUL3 142 aa11.16□□□□□ -0.62
Shank1-201ENSMUST00000107934 CenpwQ3URR0 86 aa11.15□□□□□ -0.62
Shank1-201ENSMUST00000107934 H2al1kJ3QP08 105 aa11.15□□□□□ -0.62
Shank1-201ENSMUST00000107934 AcacbE9Q4Z2 2448 aa11.15□□□□□ -0.62
Shank1-201ENSMUST00000107934 Sprr2jO70561 109 aa11.15□□□□□ -0.62
Shank1-201ENSMUST00000107934 Gm5153P01627 120 aa11.14□□□□□ -0.63
Shank1-201ENSMUST00000107934 Med13lQ6JPI3 2207 aa11.14□□□□□ -0.63
Shank1-201ENSMUST00000107934 4930432M17RikQ3V0W9 174 aa11.14□□□□□ -0.63
Shank1-201ENSMUST00000107934 Arid1bE9Q4N7 2244 aa11.12□□□□□ -0.63
Shank1-201ENSMUST00000107934 Defb38Q7TNV7 63 aa11.12□□□□□ -0.63
Shank1-201ENSMUST00000107934 Gm9887F6RFI0 207 aa11.12□□□□□ -0.63
Shank1-201ENSMUST00000107934 Odf3l2Q3TZ65 277 aa11.12□□□□□ -0.63
Shank1-201ENSMUST00000107934 Serp1Q9Z1W5 66 aa11.12□□□□□ -0.63
Shank1-201ENSMUST00000107934 NbasE9Q411 2356 aa11.12□□□□□ -0.63
Shank1-201ENSMUST00000107934 4930524J08RikQ9CUJ5 163 aa11.12□□□□□ -0.63
Shank1-201ENSMUST00000107934 Col5a1O88207 1838 aa11.11□□□□□ -0.63
Shank1-201ENSMUST00000107934 Gm10337F7DEP7 55 aa11.1□□□□□ -0.63
Shank1-201ENSMUST00000107934 Ntn5Q3UQ22 452 aa11.09□□□□□ -0.63
Shank1-201ENSMUST00000107934 PtprbB2RU80 1998 aa11.09□□□□□ -0.63
Shank1-201ENSMUST00000107934 Wfdc17Q5SSJ1 76 aa11.09□□□□□ -0.63
Shank1-201ENSMUST00000107934 Igkv8-19A0A0G2JFN8 121 aa11.06□□□□□ -0.64
Shank1-201ENSMUST00000107934 2310009B15RikA0A0A6YWI4 143 aa11.06□□□□□ -0.64
Shank1-201ENSMUST00000107934 Defb39Q70KL3 74 aa11.06□□□□□ -0.64
Shank1-201ENSMUST00000107934 Rif1Q6PR54 2419 aaKnown RBP11.05□□□□□ -0.64
Shank1-201ENSMUST00000107934 TroQ6DIC6 2087 aa11.05□□□□□ -0.64
Shank1-201ENSMUST00000107934 Rtl10D3YWW5 146 aa11.04□□□□□ -0.64
Shank1-201ENSMUST00000107934 AcanQ61282 2132 aaKnown RBP11.04□□□□□ -0.64
Shank1-201ENSMUST00000107934 Srsf12Q8C8K3 266 aa11.03□□□□□ -0.64
Shank1-201ENSMUST00000107934 Zfand2aQ9JII7 171 aa11.03□□□□□ -0.64
Shank1-201ENSMUST00000107934 Q9DAA7 145 aa11.02□□□□□ -0.65
Shank1-201ENSMUST00000107934 Gm10845Q3UNY9 185 aa11.01□□□□□ -0.65
Shank1-201ENSMUST00000107934 Defb11Q8R2I7 77 aa11□□□□□ -0.65
Shank1-201ENSMUST00000107934 Znf580Q9DB38 172 aa10.99□□□□□ -0.65
Shank1-201ENSMUST00000107934 A730009L09RikA0A1B0GS82 72 aa10.99□□□□□ -0.65
Shank1-201ENSMUST00000107934 BC025920Q3US60 128 aa10.99□□□□□ -0.65
Shank1-201ENSMUST00000107934 Gm28230A0A0A0MQ91 144 aa10.99□□□□□ -0.65
Shank1-201ENSMUST00000107934 A830031A19RikQ8BNT5 113 aa10.98□□□□□ -0.65
Shank1-201ENSMUST00000107934 Alms1Q8K4E0 3251 aa10.97□□□□□ -0.65
Shank1-201ENSMUST00000107934 Gm10135F6TEE5 83 aa10.97□□□□□ -0.65
Shank1-201ENSMUST00000107934 Gm10549Q3URY4 149 aa10.97□□□□□ -0.65
Shank1-201ENSMUST00000107934 Piezo1E2JF22 2547 aa10.96□□□□□ -0.65
Shank1-201ENSMUST00000107934 Cd164Q9R0L9 197 aa10.96□□□□□ -0.65
Shank1-201ENSMUST00000107934 UqcrqQ9CQ69 82 aa10.96□□□□□ -0.65
Shank1-201ENSMUST00000107934 Dido1Q8C9B9 2256 aaKnown RBP10.96□□□□□ -0.66
Shank1-201ENSMUST00000107934 Notch3Q61982 2318 aa10.95□□□□□ -0.66
Shank1-201ENSMUST00000107934 Sorl1O88307 2215 aaKnown RBP10.94□□□□□ -0.66
Shank1-201ENSMUST00000107934 Gm43218A0A0G2JGT0 114 aa10.93□□□□□ -0.66
Shank1-201ENSMUST00000107934 OtoglF7A4A7 2325 aa10.92□□□□□ -0.66
Shank1-201ENSMUST00000107934 Gm10642Q3TWM1 71 aa10.92□□□□□ -0.66
Shank1-201ENSMUST00000107934 Spink13Q3UTS8 97 aa10.91□□□□□ -0.66
Shank1-201ENSMUST00000107934 Gm16181B0V2H2 73 aa10.9□□□□□ -0.66
Shank1-201ENSMUST00000107934 Arhgap32Q811P8 2089 aa10.89□□□□□ -0.67
Shank1-201ENSMUST00000107934 Zfyve26Q5DU37 2529 aa10.89□□□□□ -0.67
Shank1-201ENSMUST00000107934 Crip3Q6Q6R3 243 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms