RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Ighv10-3A0A075B5T6 119 aa7.44□□□□□ -1.22
Lig4-201ENSMUST00000095476 Gm10570F6VB42 170 aa7.44□□□□□ -1.22
Lig4-201ENSMUST00000095476 B9d2Q3UK10 175 aa7.44□□□□□ -1.22
Lig4-201ENSMUST00000095476 AcanQ61282 2132 aaKnown RBP7.44□□□□□ -1.22
Lig4-201ENSMUST00000095476 Sslp1Q3UN54 99 aa7.44□□□□□ -1.22
Lig4-201ENSMUST00000095476 Gm10226O88253 85 aa7.43□□□□□ -1.22
Lig4-201ENSMUST00000095476 Plac8l1Q08EJ0 177 aa7.43□□□□□ -1.22
Lig4-201ENSMUST00000095476 Dopey1Q8BL99 2399 aa7.43□□□□□ -1.22
Lig4-201ENSMUST00000095476 Ighv1-59A0A0A6YXE0 117 aa7.43□□□□□ -1.22
Lig4-201ENSMUST00000095476 Ly6gP35461 111 aa7.42□□□□□ -1.22
Lig4-201ENSMUST00000095476 A530084C06RikQ3UTW2 186 aa7.42□□□□□ -1.22
Lig4-201ENSMUST00000095476 3110070M22RikQ9DAQ7 118 aa7.42□□□□□ -1.22
Lig4-201ENSMUST00000095476 Ighv1-56A0A0A6YXG2 117 aa7.41□□□□□ -1.22
Lig4-201ENSMUST00000095476 A0A286YE49 62 aa7.41□□□□□ -1.22
Lig4-201ENSMUST00000095476 Ptpn13Q64512 2453 aa7.41□□□□□ -1.22
Lig4-201ENSMUST00000095476 Gm10300Q8C8P7 189 aa7.41□□□□□ -1.22
Lig4-201ENSMUST00000095476 Sorl1O88307 2215 aaKnown RBP7.41□□□□□ -1.22
Lig4-201ENSMUST00000095476 AI854703Q8BIN3 203 aa7.41□□□□□ -1.22
Lig4-201ENSMUST00000095476 B230217C12RikE9Q3Z1 139 aa7.41□□□□□ -1.22
Lig4-201ENSMUST00000095476 Chchd7Q8K2Q5 85 aa7.41□□□□□ -1.22
Lig4-201ENSMUST00000095476 Tcl1b5P56845 121 aa7.4□□□□□ -1.22
Lig4-201ENSMUST00000095476 Shisa2Q8QZV2 295 aa7.4□□□□□ -1.22
Lig4-201ENSMUST00000095476 Esm1Q9QYY7 184 aa7.4□□□□□ -1.22
Lig4-201ENSMUST00000095476 Sprr2jO70561 109 aa7.4□□□□□ -1.22
Lig4-201ENSMUST00000095476 Defb40Q70KL2 73 aa7.4□□□□□ -1.22
Lig4-201ENSMUST00000095476 Wfdc12Q9JHY3 85 aa7.4□□□□□ -1.23
Lig4-201ENSMUST00000095476 DscamQ9ERC8 2013 aa7.4□□□□□ -1.23
Lig4-201ENSMUST00000095476 Igkv1-117A0A140T8M0 119 aa7.4□□□□□ -1.23
Lig4-201ENSMUST00000095476 Fhl2O70433 279 aa7.4□□□□□ -1.23
Lig4-201ENSMUST00000095476 Rnase1P00683 149 aa7.4□□□□□ -1.23
Lig4-201ENSMUST00000095476 Psmb11Q8BG41 302 aa7.4□□□□□ -1.23
Lig4-201ENSMUST00000095476 4930556J24RikQ9D4U7 146 aa7.39□□□□□ -1.23
Lig4-201ENSMUST00000095476 Reg3bP35230 175 aa7.39□□□□□ -1.23
Lig4-201ENSMUST00000095476 Gm10197F6QEY5 67 aa7.39□□□□□ -1.23
Lig4-201ENSMUST00000095476 Igkv3-5A0A140T8M6 119 aa7.39□□□□□ -1.23
Lig4-201ENSMUST00000095476 7530416G11RikJ3QJX6 159 aa7.39□□□□□ -1.23
Lig4-201ENSMUST00000095476 Lrp4Q8VI56 1905 aa7.39□□□□□ -1.23
Lig4-201ENSMUST00000095476 PtprbB2RU80 1998 aa7.38□□□□□ -1.23
Lig4-201ENSMUST00000095476 Igkv1-110A0A0B4J1I0 119 aa7.38□□□□□ -1.23
Lig4-201ENSMUST00000095476 Gm20604F8WIA3 75 aa7.38□□□□□ -1.23
Lig4-201ENSMUST00000095476 Ccl21aP84444 133 aa7.38□□□□□ -1.23
Lig4-201ENSMUST00000095476 Ccl21bP86792 133 aa7.38□□□□□ -1.23
Lig4-201ENSMUST00000095476 Ccl21cP86793 133 aa7.38□□□□□ -1.23
Lig4-201ENSMUST00000095476 Ifitm6A0A1B0GS75 124 aa7.37□□□□□ -1.23
Lig4-201ENSMUST00000095476 CrygeQ03740 174 aa7.37□□□□□ -1.23
Lig4-201ENSMUST00000095476 Coa6Q8BGD8 79 aa7.37□□□□□ -1.23
Lig4-201ENSMUST00000095476 Cd164l2Q9D6W7 172 aa7.37□□□□□ -1.23
Lig4-201ENSMUST00000095476 Higd2aQ9CQJ1 106 aa7.37□□□□□ -1.23
Lig4-201ENSMUST00000095476 Pcsk5Q04592 1877 aa7.37□□□□□ -1.23
Lig4-201ENSMUST00000095476 Kiaa1549Q68FD9 1940 aa7.36□□□□□ -1.23
Lig4-201ENSMUST00000095476 Znf580Q9DB38 172 aa7.36□□□□□ -1.23
Lig4-201ENSMUST00000095476 Flg2Q2VIS4 2362 aa7.36□□□□□ -1.23
Lig4-201ENSMUST00000095476 Jbts17Q8CE72 3214 aa7.35□□□□□ -1.23
Lig4-201ENSMUST00000095476 Cspg4Q8VHY0 2327 aa7.35□□□□□ -1.23
Lig4-201ENSMUST00000095476 P06329 120 aa7.35□□□□□ -1.23
Lig4-201ENSMUST00000095476 Ighv2-5A0A0A6YY69 116 aa7.35□□□□□ -1.23
Lig4-201ENSMUST00000095476 Gm3285A0A1W2P7U0 201 aa7.34□□□□□ -1.23
Lig4-201ENSMUST00000095476 Gm9925F6T2U3 160 aa7.34□□□□□ -1.23
Lig4-201ENSMUST00000095476 Zfp292Q9Z2U2 2698 aa7.34□□□□□ -1.23
Lig4-201ENSMUST00000095476 P01819 144 aa7.34□□□□□ -1.23
Lig4-201ENSMUST00000095476 Brwd1Q921C3 2304 aa7.34□□□□□ -1.23
Lig4-201ENSMUST00000095476 SetxA2AKX3 2646 aa7.34□□□□□ -1.23
Lig4-201ENSMUST00000095476 Gm9887F6RFI0 207 aa7.34□□□□□ -1.24
Lig4-201ENSMUST00000095476 PrlhG3UWC3 86 aa7.34□□□□□ -1.24
Lig4-201ENSMUST00000095476 Pla2g2aP31482 146 aa7.34□□□□□ -1.24
Lig4-201ENSMUST00000095476 A0A286YCN5 57 aa7.33□□□□□ -1.24
Lig4-201ENSMUST00000095476 Zfand2aQ9JII7 171 aa7.33□□□□□ -1.24
Lig4-201ENSMUST00000095476 Ighv2-9-1A0A075B697 116 aa7.33□□□□□ -1.24
Lig4-201ENSMUST00000095476 Erdr1J3QMM0 206 aa7.33□□□□□ -1.24
Lig4-201ENSMUST00000095476 1700074P13RikQ9D9G7 251 aa7.33□□□□□ -1.24
Lig4-201ENSMUST00000095476 Hcfc1Q61191 2045 aaKnown RBP7.32□□□□□ -1.24
Lig4-201ENSMUST00000095476 Fam19a3Q7TPG6 132 aa7.31□□□□□ -1.24
Lig4-201ENSMUST00000095476 Sostdc1Q9CQN4 206 aa7.31□□□□□ -1.24
Lig4-201ENSMUST00000095476 E130114P18RikF6S0S7 154 aa7.31□□□□□ -1.24
Lig4-201ENSMUST00000095476 Defb42Q8BVB5 75 aa7.3□□□□□ -1.24
Lig4-201ENSMUST00000095476 OtoglF7A4A7 2325 aa7.3□□□□□ -1.24
Lig4-201ENSMUST00000095476 Odf3l2Q3TZ65 277 aa7.3□□□□□ -1.24
Lig4-201ENSMUST00000095476 PlaurP35456 327 aa7.29□□□□□ -1.24
Lig4-201ENSMUST00000095476 Tln1P26039 2541 aaKnown RBP7.29□□□□□ -1.24
Lig4-201ENSMUST00000095476 Defb13Q8R2I4 64 aa7.29□□□□□ -1.24
Lig4-201ENSMUST00000095476 Ighv2-2A0A075B5P8 116 aa7.29□□□□□ -1.24
Lig4-201ENSMUST00000095476 P01821 116 aa7.29□□□□□ -1.24
Lig4-201ENSMUST00000095476 Gm9573F7C950 1606 aa7.29□□□□□ -1.24
Lig4-201ENSMUST00000095476 Q9DAA7 145 aa7.28□□□□□ -1.24
Lig4-201ENSMUST00000095476 Obox2E9PXV9 151 aa7.28□□□□□ -1.24
Lig4-201ENSMUST00000095476 NrgnP60761 78 aa7.28□□□□□ -1.24
Lig4-201ENSMUST00000095476 Gm9922Q8C3P1 144 aa7.28□□□□□ -1.24
Lig4-201ENSMUST00000095476 Ankrd11E9Q4F7 2643 aa7.28□□□□□ -1.24
Lig4-201ENSMUST00000095476 2310034G01RikA0A286YDL3 209 aa7.27□□□□□ -1.24
Lig4-201ENSMUST00000095476 Igkv3-10A0A0G2JGN0 119 aa7.27□□□□□ -1.25
Lig4-201ENSMUST00000095476 Szt2A2A9C3 3431 aa7.27□□□□□ -1.25
Lig4-201ENSMUST00000095476 Gm10267M0QWD8 85 aa7.27□□□□□ -1.25
Lig4-201ENSMUST00000095476 Wfdc10Q3V2J9 124 aa7.27□□□□□ -1.25
Lig4-201ENSMUST00000095476 Col12a1Q60847 3120 aa7.27□□□□□ -1.25
Lig4-201ENSMUST00000095476 Lce6aD3YV94 81 aa7.26□□□□□ -1.25
Lig4-201ENSMUST00000095476 Gm26661M0QWV4 156 aa7.26□□□□□ -1.25
Lig4-201ENSMUST00000095476 Gpha2Q925Q5 128 aa7.26□□□□□ -1.25
Lig4-201ENSMUST00000095476 Gm10308Q9CVR5 141 aa7.26□□□□□ -1.25
Lig4-201ENSMUST00000095476 TrrapQ80YV3 2565 aaKnown RBP7.26□□□□□ -1.25
Lig4-201ENSMUST00000095476 Gm9913Q8BQQ2 135 aa7.26□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms