RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Q9DAB9 146 aa10.34□□□□□ -0.75
Col2a1-202ENSMUST00000088355 Q9DAQ5 155 aa10.34□□□□□ -0.75
Col2a1-202ENSMUST00000088355 Ube2d4D3YUH6 135 aa10.34□□□□□ -0.75
Col2a1-202ENSMUST00000088355 FlnbQ80X90 2602 aaKnown RBP10.33□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Ighv2-9-1A0A075B697 116 aa10.33□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Trbv13-2A0A140T8N6 113 aa10.33□□□□□ -0.76
Col2a1-202ENSMUST00000088355 P01755 137 aa10.33□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Spink8Q09TK9 105 aa10.33□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Col5a1O88207 1838 aa10.33□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Kiaa1549Q68FD9 1940 aa10.32□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Ighv10-1A0A0B4J1J6 119 aa10.32□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Igkv8-21A0A140T8P7 120 aa10.32□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Defb13Q8R2I4 64 aa10.32□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Znf580Q9DB38 172 aa10.32□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Krtap27-1E9PX37 202 aa10.3□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Cdc42se2Q8BGH7 84 aa10.3□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Igf1P05017 153 aa10.3□□□□□ -0.76
Col2a1-202ENSMUST00000088355 B230217C12RikE9Q3Z1 139 aa10.3□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Srsf12Q8C8K3 266 aa10.3□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Ly6g6cQ9Z1Q4 126 aa10.3□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Igkv4-92A0A0B4J1I2 117 aa10.3□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Ube2d1P61080 147 aaKnown RBP10.3□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Spink4O35679 86 aa10.29□□□□□ -0.76
Col2a1-202ENSMUST00000088355 A830005F24RikQ8BRT5 167 aa10.29□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Tcl1b5P56845 121 aa10.29□□□□□ -0.76
Col2a1-202ENSMUST00000088355 ScxQ64124 207 aa10.28□□□□□ -0.76
Col2a1-202ENSMUST00000088355 Ankrd11E9Q4F7 2643 aa10.28□□□□□ -0.76
Col2a1-202ENSMUST00000088355 CicQ924A2 2510 aa10.27□□□□□ -0.77
Col2a1-202ENSMUST00000088355 P06320 134 aa10.27□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Ighv8-5A0A0A6YY60 119 aa10.27□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Cox7bP56393 80 aa10.27□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Brk1Q91VR8 75 aa10.27□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Pla2g2eQ9QUL3 142 aa10.27□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Prr15lQ8JZM2 100 aa10.26□□□□□ -0.77
Col2a1-202ENSMUST00000088355 CtrlQ9ER05 264 aa10.26□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Rpl28P41105 137 aaKnown RBP10.26□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Klk9Q32M27 251 aa10.25□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Gm10577Q3UDV9 132 aa10.25□□□□□ -0.77
Col2a1-202ENSMUST00000088355 TrioQ0KL02 3102 aa10.25□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Gpha2Q925Q5 128 aa10.25□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Znf706Q9D115 76 aaKnown RBP10.25□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Gm20604F8WIA3 75 aa10.25□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Ighv8-13A0A075B5Y0 101 aa10.24□□□□□ -0.77
Col2a1-202ENSMUST00000088355 1700011M02RikB1AX35 88 aa10.24□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Atp5eP56382 52 aa10.24□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Igkv1-110A0A0B4J1I0 119 aa10.24□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Igkv1-117A0A140T8M0 119 aa10.22□□□□□ -0.77
Col2a1-202ENSMUST00000088355 4930535I16RikQ9CUI2 172 aa10.22□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Cep350E9Q309 3095 aa10.22□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Ighv10-3A0A075B5T6 119 aa10.22□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Trav14-1A0A0G2JF94 121 aa10.22□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Wfdc13Q5DQQ6 81 aa10.22□□□□□ -0.77
Col2a1-202ENSMUST00000088355 Zfp292Q9Z2U2 2698 aa10.21□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Gm11011D3Z3L9 86 aa10.21□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Smim1P0C8K7 78 aa10.21□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Gm10300Q8C8P7 189 aa10.21□□□□□ -0.78
Col2a1-202ENSMUST00000088355 EnhoQ8K1D8 76 aa10.2□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Defb40Q70KL2 73 aa10.19□□□□□ -0.78
Col2a1-202ENSMUST00000088355 BtcQ05928 177 aa10.19□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Lama2Q60675 3118 aaKnown RBP10.19□□□□□ -0.78
Col2a1-202ENSMUST00000088355 SrarpQ3ULG3 163 aa10.19□□□□□ -0.78
Col2a1-202ENSMUST00000088355 SptssbQ925E8 76 aa10.18□□□□□ -0.78
Col2a1-202ENSMUST00000088355 4930556J24RikQ9D4U7 146 aa10.18□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Ighv8-11A0A075B5X4 119 aa10.18□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Ndufc1Q9CQY9 76 aa10.17□□□□□ -0.78
Col2a1-202ENSMUST00000088355 NpwA0A1L1STR8 176 aa10.17□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Wdr38Q9D994 303 aa10.17□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Dnah12Q3V0Q1 3086 aa10.17□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Rtl10D3YWW5 146 aa10.16□□□□□ -0.78
Col2a1-202ENSMUST00000088355 BaalcQ8VHV1 145 aa10.16□□□□□ -0.78
Col2a1-202ENSMUST00000088355 FasnP19096 2504 aaKnown RBP10.16□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Gm28374F6SG70 93 aa10.16□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Rnf152Q8BG47 203 aa10.16□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Defb11Q8R2I7 77 aa10.16□□□□□ -0.78
Col2a1-202ENSMUST00000088355 Vpreb2P13373 142 aa10.14□□□□□ -0.79
Col2a1-202ENSMUST00000088355 Gm1968Q3T9I3 115 aa10.14□□□□□ -0.79
Col2a1-202ENSMUST00000088355 Gm16485Q8C4B7 115 aa10.14□□□□□ -0.79
Col2a1-202ENSMUST00000088355 Crip3Q6Q6R3 243 aa10.13□□□□□ -0.79
Col2a1-202ENSMUST00000088355 Ighv2-9A0A075B5Q5 116 aa10.12□□□□□ -0.79
Col2a1-202ENSMUST00000088355 Igkv8-30A0A140T8M3 121 aa10.12□□□□□ -0.79
Col2a1-202ENSMUST00000088355 Tmem213Q08EA8 116 aa10.12□□□□□ -0.79
Col2a1-202ENSMUST00000088355 A830031A19RikQ8BNT5 113 aa10.12□□□□□ -0.79
Col2a1-202ENSMUST00000088355 Spata3Q9D9T6 193 aa10.11□□□□□ -0.79
Col2a1-202ENSMUST00000088355 Odf3l2Q3TZ65 277 aa10.1□□□□□ -0.79
Col2a1-202ENSMUST00000088355 Igkv3-12A0A140T8P0 119 aa10.1□□□□□ -0.79
Col2a1-202ENSMUST00000088355 Smim20D3Z7Q2 69 aa10.09□□□□□ -0.79
Col2a1-202ENSMUST00000088355 Gm16181B0V2H2 73 aa10.08□□□□□ -0.8
Col2a1-202ENSMUST00000088355 Gm17509Q9CZ61 145 aa10.08□□□□□ -0.8
Col2a1-202ENSMUST00000088355 Lama3Q61789 3330 aa10.07□□□□□ -0.8
Col2a1-202ENSMUST00000088355 1600014C23RikQ9DAX4 101 aa10.07□□□□□ -0.8
Col2a1-202ENSMUST00000088355 Krtap24-1G3X9A2 248 aa10.07□□□□□ -0.8
Col2a1-202ENSMUST00000088355 Sec61gP60060 68 aa10.07□□□□□ -0.8
Col2a1-202ENSMUST00000088355 Gm5142Q8C5X9 133 aa10.06□□□□□ -0.8
Col2a1-202ENSMUST00000088355 TeppQ6IMH0 216 aa10.05□□□□□ -0.8
Col2a1-202ENSMUST00000088355 2310009B15RikA0A0A6YWI4 143 aa10.05□□□□□ -0.8
Col2a1-202ENSMUST00000088355 4930432M17RikQ3V0W9 174 aa10.05□□□□□ -0.8
Col2a1-202ENSMUST00000088355 Adm2Q7TNK8 150 aa10.05□□□□□ -0.8
Col2a1-202ENSMUST00000088355 Gm3250E9Q1M3 230 aa10.04□□□□□ -0.8
Col2a1-202ENSMUST00000088355 CdsnQ7TPC1 561 aa10.04□□□□□ -0.8
Col2a1-202ENSMUST00000088355 Psmb11Q8BG41 302 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 116.1 ms