RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Spink13Q3UTS8 97 aa10.14□□□□□ -0.79
Col3a1-201ENSMUST00000087883 4930556J24RikQ9D4U7 146 aa10.14□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Znf706Q9D115 76 aaKnown RBP10.13□□□□□ -0.79
Col3a1-201ENSMUST00000087883 TroQ6DIC6 2087 aa10.13□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Gm10135F6TEE5 83 aa10.13□□□□□ -0.79
Col3a1-201ENSMUST00000087883 SbsponQ3UPR9 264 aa10.13□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Tanc2A2A690 1994 aa10.11□□□□□ -0.79
Col3a1-201ENSMUST00000087883 B230217C12RikE9Q3Z1 139 aa10.11□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Crip2Q9DCT8 208 aaKnown RBP10.11□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Igkv3-7A0A0G2JE31 119 aa10.1□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Ighv2-9-1A0A075B697 116 aa10.1□□□□□ -0.79
Col3a1-201ENSMUST00000087883 4930432M17RikQ3V0W9 174 aa10.1□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Gm9922Q8C3P1 144 aa10.1□□□□□ -0.79
Col3a1-201ENSMUST00000087883 SnurfQ9WU12 71 aa10.1□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Pcnx3Q8VI59 2028 aa10.1□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Tet2Q4JK59 1912 aaKnown RBP10.09□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Gm10845Q3UNY9 185 aa10.09□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Wfdc3Q14AE4 130 aa10.08□□□□□ -0.8
Col3a1-201ENSMUST00000087883 Sorl1O88307 2215 aaKnown RBP10.07□□□□□ -0.8
Col3a1-201ENSMUST00000087883 Gm9887F6RFI0 207 aa10.07□□□□□ -0.8
Col3a1-201ENSMUST00000087883 Znf575Q3TXZ1 239 aa10.07□□□□□ -0.8
Col3a1-201ENSMUST00000087883 Pcnx2Q5DU28 2122 aa10.07□□□□□ -0.8
Col3a1-201ENSMUST00000087883 Krtap27-1E9PX37 202 aa10.07□□□□□ -0.8
Col3a1-201ENSMUST00000087883 UqcrqQ9CQ69 82 aa10.07□□□□□ -0.8
Col3a1-201ENSMUST00000087883 Pla2g1bQ9Z0Y2 146 aa10.07□□□□□ -0.8
Col3a1-201ENSMUST00000087883 Wfdc6bF6ULY1 148 aa10.06□□□□□ -0.8
Col3a1-201ENSMUST00000087883 C130032M10RikQ8C888 123 aa10.05□□□□□ -0.8
Col3a1-201ENSMUST00000087883 CrygfQ9CXV3 174 aa10.05□□□□□ -0.8
Col3a1-201ENSMUST00000087883 Gm5153P01627 120 aa10.05□□□□□ -0.8
Col3a1-201ENSMUST00000087883 Pla2g2cP48076 150 aa10.04□□□□□ -0.8
Col3a1-201ENSMUST00000087883 Gm4707V9GXN5 68 aa10.04□□□□□ -0.8
Col3a1-201ENSMUST00000087883 Cdip1Q9DB75 208 aa10.03□□□□□ -0.8
Col3a1-201ENSMUST00000087883 Cspg4Q8VHY0 2327 aa10.03□□□□□ -0.8
Col3a1-201ENSMUST00000087883 A930009A15RikG3UYI6 118 aa10.02□□□□□ -0.81
Col3a1-201ENSMUST00000087883 AcanQ61282 2132 aaKnown RBP10.02□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Gm10549Q3URY4 149 aa10.01□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Adamts20P59511 1906 aa10.01□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Csdc2Q91YQ3 154 aa10.01□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Igkv8-28A0A0G2JE47 121 aa10.01□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Apoc4Q61268 124 aa10□□□□□ -0.81
Col3a1-201ENSMUST00000087883 D730001G18RikA0A087WQU7 115 aa10□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Rtl10D3YWW5 146 aa10□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Shisa2Q8QZV2 295 aa10□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Nav2E9Q842 2432 aa10□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Gm17509Q9CZ61 145 aa9.99□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Gm10570F6VB42 170 aa9.99□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Brwd1Q921C3 2304 aa9.98□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Gm3443F7CCV5 94 aa9.97□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Smr3aQ61900 147 aa9.97□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Q9DAB9 146 aa9.97□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Gm9767G3X930 207 aa9.96□□□□□ -0.81
Col3a1-201ENSMUST00000087883 Pcsk5Q04592 1877 aa9.96□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Crip3Q6Q6R3 243 aa9.96□□□□□ -0.82
Col3a1-201ENSMUST00000087883 BC025920Q3US60 128 aa9.95□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Arhgap32Q811P8 2089 aa9.95□□□□□ -0.82
Col3a1-201ENSMUST00000087883 CrygeQ03740 174 aa9.95□□□□□ -0.82
Col3a1-201ENSMUST00000087883 4930519P11RikQ9CUJ8 166 aa9.95□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Cd164l2Q9D6W7 172 aa9.95□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Wfdc17Q5SSJ1 76 aa9.94□□□□□ -0.82
Col3a1-201ENSMUST00000087883 DscamQ9ERC8 2013 aa9.94□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Dido1Q8C9B9 2256 aaKnown RBP9.93□□□□□ -0.82
Col3a1-201ENSMUST00000087883 4930518I15RikQ3V2W7 57 aa9.93□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Ighv2-9A0A075B5Q5 116 aa9.93□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Bean1Q9EQG5 255 aa9.93□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Ntn5Q3UQ22 452 aa9.92□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Spint4Q9D263 159 aa9.92□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Adm2Q7TNK8 150 aa9.92□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Zfand2aQ9JII7 171 aa9.91□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Ighv8-13A0A075B5Y0 101 aa9.91□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Dopey1Q8BL99 2399 aa9.91□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Gm10197F6QEY5 67 aa9.9□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Odf3l2Q3TZ65 277 aa9.9□□□□□ -0.82
Col3a1-201ENSMUST00000087883 Gm28230A0A0A0MQ91 144 aa9.9□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Coa6Q8BGD8 79 aa9.9□□□□□ -0.83
Col3a1-201ENSMUST00000087883 SrcapA0A087WQ44 3271 aa9.89□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Ighv1-56A0A0A6YXG2 117 aa9.89□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Znf580Q9DB38 172 aa9.89□□□□□ -0.83
Col3a1-201ENSMUST00000087883 TectaO08523 2155 aa9.89□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Q9DAA7 145 aa9.89□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Prr9Q8BV84 116 aa9.88□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Col4a4Q9QZR9 1682 aa9.88□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Gm16485Q8C4B7 115 aa9.88□□□□□ -0.83
Col3a1-201ENSMUST00000087883 1600014C23RikQ9DAX4 101 aa9.87□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Cd164Q9R0L9 197 aa9.87□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Alms1Q8K4E0 3251 aa9.87□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Reg3aO09037 175 aa9.86□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Defb45Q3V490 66 aa9.86□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Spg11Q3UHA3 2430 aa9.86□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Defb2P82020 71 aa9.85□□□□□ -0.83
Col3a1-201ENSMUST00000087883 Bri3P28662 125 aa9.84□□□□□ -0.83
Col3a1-201ENSMUST00000087883 C2cd3Q52KB6 2323 aa9.84□□□□□ -0.83
Col3a1-201ENSMUST00000087883 3110070M22RikQ9DAQ7 118 aa9.84□□□□□ -0.83
Col3a1-201ENSMUST00000087883 6430550D23RikE9Q1X6 194 aa9.83□□□□□ -0.84
Col3a1-201ENSMUST00000087883 Gm10300Q8C8P7 189 aa9.83□□□□□ -0.84
Col3a1-201ENSMUST00000087883 Igkv8-19A0A0G2JFN8 121 aa9.83□□□□□ -0.84
Col3a1-201ENSMUST00000087883 Defb37Q7TMD2 62 aa9.83□□□□□ -0.84
Col3a1-201ENSMUST00000087883 Mrpl34Q99N91 92 aa9.83□□□□□ -0.84
Col3a1-201ENSMUST00000087883 Gm5464Q3UY29 175 aa9.82□□□□□ -0.84
Col3a1-201ENSMUST00000087883 Defb39Q70KL3 74 aa9.81□□□□□ -0.84
Col3a1-201ENSMUST00000087883 Cox6a2P43023 97 aa9.8□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 49.6 ms