RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Gm9513B3GLJ6 99 aa7.04□□□□□ -1.28
Copb1-201ENSMUST00000033012 Plac8l1Q08EJ0 177 aa7.04□□□□□ -1.28
Copb1-201ENSMUST00000033012 Cmya5Q70KF4 3739 aa7.04□□□□□ -1.28
Copb1-201ENSMUST00000033012 Synj2bpQ9D6K5 145 aa7.04□□□□□ -1.28
Copb1-201ENSMUST00000033012 Zfand2aQ9JII7 171 aa7.04□□□□□ -1.28
Copb1-201ENSMUST00000033012 Igkv2-109A0A075B5K6 120 aa7.03□□□□□ -1.28
Copb1-201ENSMUST00000033012 1810032O08RikE9PZV8 113 aa7.03□□□□□ -1.28
Copb1-201ENSMUST00000033012 P01755 137 aa7.03□□□□□ -1.28
Copb1-201ENSMUST00000033012 A830005F24RikQ8BRT5 167 aa7.03□□□□□ -1.28
Copb1-201ENSMUST00000033012 Ighv10-1A0A0B4J1J6 119 aa7.02□□□□□ -1.28
Copb1-201ENSMUST00000033012 CrebbpP45481 2441 aa7.02□□□□□ -1.29
Copb1-201ENSMUST00000033012 Trav13-4-dv7A0A075B6C2 110 aa7.02□□□□□ -1.29
Copb1-201ENSMUST00000033012 Armcx4E9PWM3 2356 aa7.02□□□□□ -1.29
Copb1-201ENSMUST00000033012 Igkv8-26A0A075B5N5 123 aa7.02□□□□□ -1.29
Copb1-201ENSMUST00000033012 Ighv2-7A0A075B5Q8 116 aa7.02□□□□□ -1.29
Copb1-201ENSMUST00000033012 Zfhx3Q61329 3726 aa7.02□□□□□ -1.29
Copb1-201ENSMUST00000033012 Ptprz1B9EKR1 2312 aa7.02□□□□□ -1.29
Copb1-201ENSMUST00000033012 Usmg5Q78IK2 58 aa7.01□□□□□ -1.29
Copb1-201ENSMUST00000033012 Trav9-4A0A0B4J1K2 113 aa7.01□□□□□ -1.29
Copb1-201ENSMUST00000033012 Gm17689B3GLJ4 109 aa7.01□□□□□ -1.29
Copb1-201ENSMUST00000033012 Muc4Q8JZM8 3443 aa7.01□□□□□ -1.29
Copb1-201ENSMUST00000033012 E130218I03RikA0A0U1RNU5 63 aa7.01□□□□□ -1.29
Copb1-201ENSMUST00000033012 2310034G01RikA0A286YDL3 209 aa7.01□□□□□ -1.29
Copb1-201ENSMUST00000033012 MsmbO08540 113 aa7.01□□□□□ -1.29
Copb1-201ENSMUST00000033012 Trav9-2A0A075B647 113 aa7□□□□□ -1.29
Copb1-201ENSMUST00000033012 AcacaQ5SWU9 2345 aa7□□□□□ -1.29
Copb1-201ENSMUST00000033012 B230359F08RikA0A0B4J1K3 109 aa7□□□□□ -1.29
Copb1-201ENSMUST00000033012 Gm11011D3Z3L9 86 aa7□□□□□ -1.29
Copb1-201ENSMUST00000033012 P06320 134 aa7□□□□□ -1.29
Copb1-201ENSMUST00000033012 Ufsp1Q9CZP0 217 aa6.99□□□□□ -1.29
Copb1-201ENSMUST00000033012 Ighv2-2A0A075B5P8 116 aa6.99□□□□□ -1.29
Copb1-201ENSMUST00000033012 P01821 116 aa6.99□□□□□ -1.29
Copb1-201ENSMUST00000033012 Cdc42se1Q8BHL7 80 aa6.99□□□□□ -1.29
Copb1-201ENSMUST00000033012 Igkv3-10A0A0G2JGN0 119 aa6.98□□□□□ -1.29
Copb1-201ENSMUST00000033012 C530025M09RikF6RGA8 229 aa6.98□□□□□ -1.29
Copb1-201ENSMUST00000033012 Trav13-1A0A075B644 110 aa6.98□□□□□ -1.29
Copb1-201ENSMUST00000033012 Gm10553J3QPF1 123 aa6.98□□□□□ -1.29
Copb1-201ENSMUST00000033012 Sprr3O09116 238 aa6.98□□□□□ -1.29
Copb1-201ENSMUST00000033012 Q8BT88 171 aa6.98□□□□□ -1.29
Copb1-201ENSMUST00000033012 LrbaQ9ESE1 2856 aa6.98□□□□□ -1.29
Copb1-201ENSMUST00000033012 Bdp1Q571C7 2467 aa6.98□□□□□ -1.29
Copb1-201ENSMUST00000033012 Hes7Q8BKT2 225 aa6.98□□□□□ -1.29
Copb1-201ENSMUST00000033012 Trav9n-4A0A075B631 113 aa6.97□□□□□ -1.29
Copb1-201ENSMUST00000033012 Trav9d-3A0A075B695 113 aa6.97□□□□□ -1.29
Copb1-201ENSMUST00000033012 Trav9n-2A0A0G2JDP3 113 aa6.97□□□□□ -1.29
Copb1-201ENSMUST00000033012 Gm9970F6ZED4 185 aa6.97□□□□□ -1.29
Copb1-201ENSMUST00000033012 Tcl1b3P56842 122 aa6.97□□□□□ -1.29
Copb1-201ENSMUST00000033012 Med13lQ6JPI3 2207 aa6.97□□□□□ -1.29
Copb1-201ENSMUST00000033012 Myo15bI7HPW8 3033 aa6.97□□□□□ -1.29
Copb1-201ENSMUST00000033012 Fam110dQ80X91 271 aa6.97□□□□□ -1.29
Copb1-201ENSMUST00000033012 Igkv8-18A0A0B4J1J3 123 aa6.96□□□□□ -1.29
Copb1-201ENSMUST00000033012 Gm815Q3UWS2 115 aa6.96□□□□□ -1.29
Copb1-201ENSMUST00000033012 AI606181Q8C7B9 129 aa6.96□□□□□ -1.29
Copb1-201ENSMUST00000033012 Higd2aQ9CQJ1 106 aa6.96□□□□□ -1.29
Copb1-201ENSMUST00000033012 Spink1P09036 80 aa6.96□□□□□ -1.3
Copb1-201ENSMUST00000033012 Gm10320E9PW43 113 aa6.96□□□□□ -1.3
Copb1-201ENSMUST00000033012 Gm10160F6Y577 67 aa6.96□□□□□ -1.3
Copb1-201ENSMUST00000033012 Gm10226O88253 85 aa6.96□□□□□ -1.3
Copb1-201ENSMUST00000033012 Prp2P05143 317 aa6.96□□□□□ -1.3
Copb1-201ENSMUST00000033012 P01738 130 aa6.95□□□□□ -1.3
Copb1-201ENSMUST00000033012 Lmo4P61969 165 aa6.95□□□□□ -1.3
Copb1-201ENSMUST00000033012 Lyrm9Q3UN90 78 aa6.95□□□□□ -1.3
Copb1-201ENSMUST00000033012 Sox16Q62247 57 aa6.95□□□□□ -1.3
Copb1-201ENSMUST00000033012 Pde6gP09174 87 aa6.95□□□□□ -1.3
Copb1-201ENSMUST00000033012 4933415A04RikQ9D443 101 aa6.95□□□□□ -1.3
Copb1-201ENSMUST00000033012 MobpQ9D2P8 170 aa6.94□□□□□ -1.3
Copb1-201ENSMUST00000033012 Akap6E9Q9K8 2307 aa6.94□□□□□ -1.3
Copb1-201ENSMUST00000033012 Klk12B2RVZ0 247 aa6.94□□□□□ -1.3
Copb1-201ENSMUST00000033012 Cela2aP05208 271 aa6.93□□□□□ -1.3
Copb1-201ENSMUST00000033012 A730071L15RikQ8C4X0 137 aa6.93□□□□□ -1.3
Copb1-201ENSMUST00000033012 Trav14-1A0A0G2JF94 121 aa6.93□□□□□ -1.3
Copb1-201ENSMUST00000033012 Gm10197F6QEY5 67 aa6.93□□□□□ -1.3
Copb1-201ENSMUST00000033012 Abca4O35600 2310 aa6.93□□□□□ -1.3
Copb1-201ENSMUST00000033012 Q99M08 65 aa6.93□□□□□ -1.3
Copb1-201ENSMUST00000033012 Trank1Q8BV79 2999 aa6.92□□□□□ -1.3
Copb1-201ENSMUST00000033012 Trav13d-4A0A0G2JFX3 110 aa6.92□□□□□ -1.3
Copb1-201ENSMUST00000033012 Cox7a1P56392 80 aa6.92□□□□□ -1.3
Copb1-201ENSMUST00000033012 Lama5Q61001 3718 aa6.92□□□□□ -1.3
Copb1-201ENSMUST00000033012 Sorl1O88307 2215 aaKnown RBP6.92□□□□□ -1.3
Copb1-201ENSMUST00000033012 Adgrg4B7ZCC9 3073 aa6.92□□□□□ -1.3
Copb1-201ENSMUST00000033012 Igkv8-34A0A0G2JDU0 121 aa6.91□□□□□ -1.3
Copb1-201ENSMUST00000033012 Gm16181B0V2H2 73 aa6.91□□□□□ -1.3
Copb1-201ENSMUST00000033012 Dynlrb2Q9DAJ5 96 aa6.91□□□□□ -1.3
Copb1-201ENSMUST00000033012 4930470P17RikQ9D542 155 aa6.9□□□□□ -1.3
Copb1-201ENSMUST00000033012 Spg11Q3UHA3 2430 aa6.9□□□□□ -1.3
Copb1-201ENSMUST00000033012 Gm10772F7AIG4 85 aa6.9□□□□□ -1.31
Copb1-201ENSMUST00000033012 Pgpep1lQ9CWB5 130 aa6.9□□□□□ -1.31
Copb1-201ENSMUST00000033012 P01786 117 aa6.89□□□□□ -1.31
Copb1-201ENSMUST00000033012 NbeaQ9EPN1 2936 aa6.89□□□□□ -1.31
Copb1-201ENSMUST00000033012 Dad1P61804 113 aa6.89□□□□□ -1.31
Copb1-201ENSMUST00000033012 9530003J23RikQ8BM26 151 aa6.89□□□□□ -1.31
Copb1-201ENSMUST00000033012 Chd9Q8BYH8 2885 aa6.89□□□□□ -1.31
Copb1-201ENSMUST00000033012 Notch3Q61982 2318 aa6.88□□□□□ -1.31
Copb1-201ENSMUST00000033012 Prpf8Q99PV0 2335 aaKnown RBP6.88□□□□□ -1.31
Copb1-201ENSMUST00000033012 Igkv4-58A0A0G2JGI6 119 aa6.88□□□□□ -1.31
Copb1-201ENSMUST00000033012 Reg3gO09049 174 aa6.88□□□□□ -1.31
Copb1-201ENSMUST00000033012 Sptan1P16546 2472 aaKnown RBP6.88□□□□□ -1.31
Copb1-201ENSMUST00000033012 Coa6Q8BGD8 79 aa6.87□□□□□ -1.31
Copb1-201ENSMUST00000033012 Sprr1bQ62267 153 aa6.86□□□□□ -1.31
Copb1-201ENSMUST00000033012 Cox7bP56393 80 aa6.86□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms