RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Defb12Q8K4N3 78 aa6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Lelp1Q9DAE3 120 aa6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Trav13-4-dv7A0A075B6C2 110 aa6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Klk12B2RVZ0 247 aa6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Gm21748Q3UE70 102 aa6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 SvipQ3UZP4 77 aa6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Igkv2-109A0A075B5K6 120 aa6.06□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Lama1P19137 3084 aa6.06□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Gm43218A0A0G2JGT0 114 aa6.06□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Klk9Q32M27 251 aa6.06□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Chd8Q09XV5 2582 aaKnown RBP6.06□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Tfpi2O35536 230 aa6.06□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Gm17521F6QAC8 156 aa6.05□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 AtmQ62388 3066 aa6.05□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Wdfy4E9Q2M9 3149 aa6.05□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Trav7-6A0A075B640 112 aa6.05□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 E130114P18RikF6S0S7 154 aa6.05□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Trav13-1A0A075B644 110 aa6.05□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 1700074P13RikQ9D9G7 251 aa6.05□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 AI854703Q8BIN3 203 aa6.05□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 DmdP11531 3678 aa6.05□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Sh2d1aO88890 126 aa6.04□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 CrygeQ03740 174 aa6.04□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Trav13n-2A0A0G2JF93 110 aa6.04□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Tnfrsf23Q9ER63 176 aa6.04□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Igkv4-92A0A0B4J1I2 117 aa6.04□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Igkv8-30A0A140T8M3 121 aa6.04□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 B230359F08RikA0A0B4J1K3 109 aa6.04□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Ndufb1P0DN34 57 aa6.04□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Pla2g1bQ9Z0Y2 146 aa6.04□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Gm10300Q8C8P7 189 aa6.03□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 PscaP57096 123 aa6.03□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 KalrnA2CG49 2964 aa6.03□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Cox8cA6H666 72 aa6.03□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Tmem254aP0DN89 123 aa6.03□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Tmem254bP0DN90 123 aa6.03□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Tmem254cP0DN91 123 aa6.03□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Lrrc37aB1AWG4 3215 aa6.03□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Tmem213Q08EA8 116 aa6.03□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 H2al1aQ5M8Q2 105 aa6.03□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 H2al1eQ810S6 105 aa6.03□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Ndufc1Q9CQY9 76 aa6.03□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Abca12E9Q876 2595 aa6.02□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 5730596B20RikQ8BQ08 205 aa6.02□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Q8K1L6 76 aa6.02□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Ufsp1Q9CZP0 217 aa6.02□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Fbn2Q61555 2907 aa6.02□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Plac8l1Q08EJ0 177 aa6.02□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Rpl39lQ9CQD0 51 aa6.02□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Abca2P41234 2434 aa6.02□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Ighv2-9-1A0A075B697 116 aa6.02□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Igkv1-35A0A0G2JDE5 120 aa6.01□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Gm9887F6RFI0 207 aa6.01□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 CrygaP04345 174 aa6.01□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Spink13Q3UTS8 97 aa6.01□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 H2al1bA0A087WP11 105 aa6.01□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Atp5eP56382 52 aa6.01□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Gm20604F8WIA3 75 aa6.01□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 4930432M17RikQ3V0W9 174 aa6.01□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Psors1c2Q80ZC9 134 aa6.01□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Wnk1P83741 2377 aa6.01□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 TroQ6DIC6 2087 aa6.01□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Esm1Q9QYY7 184 aa6.01□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Ly6hQ9WUC3 139 aa6.01□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Tcl1b5P56845 121 aa6□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Sox16Q62247 57 aa6□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 1700011M02RikB1AX35 88 aa6□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Nav3Q80TN7 2359 aa6□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 NpwA0A1L1STR8 176 aa6□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 9430015G10RikA2ASP7 199 aa6□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Krtap24-1G3X9A2 248 aa6□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Wdr38Q9D994 303 aa6□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Cryba4Q9JJV0 196 aa5.99□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Itpr1P11881 2749 aa5.99□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Igkv3-12A0A140T8P0 119 aa5.99□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Cox7bP56393 80 aa5.99□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Q9DAQ5 155 aa5.99□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Zfand2aQ9JII7 171 aa5.99□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Odf3l2Q3TZ65 277 aa5.99□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Gpha2Q925Q5 128 aa5.99□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Ndufs5Q99LY9 106 aa5.99□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Igkv1-117A0A140T8M0 119 aa5.99□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Znf706Q9D115 76 aaKnown RBP5.99□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Wfdc10Q3V2J9 124 aa5.98□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Apoc4Q61268 124 aa5.98□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Pou2af1Q64693 256 aa5.98□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 H2al1mQ9DAD9 105 aa5.98□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Gm10549Q3URY4 149 aa5.98□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Lypd5Q9D7Z7 256 aa5.98□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 D730001G18RikA0A087WQU7 115 aa5.98□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 CenpwQ3URR0 86 aa5.97□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Prr15lQ8JZM2 100 aa5.97□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Bahcc1Q3UHR0 2643 aa5.97□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Igkv1-110A0A0B4J1I0 119 aa5.97□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Trbv13-2A0A140T8N6 113 aa5.97□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Ighv10-1A0A0B4J1J6 119 aa5.97□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 P84750 121 aa5.97□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 MobpQ9D2P8 170 aa5.97□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Myo9aQ8C170 2542 aa5.97□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 A830005F24RikQ8BRT5 167 aa5.97□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms