RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Ndufa12Q7TMF3 145 aaKnown RBP13.66□□□□□ -0.22
Tram1-201ENSMUST00000027068 Brk1Q91VR8 75 aa13.66□□□□□ -0.22
Tram1-201ENSMUST00000027068 Lypd5Q9D7Z7 256 aa13.66□□□□□ -0.22
Tram1-201ENSMUST00000027068 Rnf152Q8BG47 203 aa13.65□□□□□ -0.22
Tram1-201ENSMUST00000027068 Defb42Q8BVB5 75 aa13.65□□□□□ -0.22
Tram1-201ENSMUST00000027068 Gm11565A2A4M7 156 aa13.65□□□□□ -0.22
Tram1-201ENSMUST00000027068 P01755 137 aa13.65□□□□□ -0.22
Tram1-201ENSMUST00000027068 Cox7a1P56392 80 aa13.65□□□□□ -0.22
Tram1-201ENSMUST00000027068 Ighv1-49A0A0A6YWX2 117 aa13.64□□□□□ -0.23
Tram1-201ENSMUST00000027068 Tep1P97499 2629 aa13.64□□□□□ -0.23
Tram1-201ENSMUST00000027068 Trav13d-4A0A0G2JFX3 110 aa13.64□□□□□ -0.23
Tram1-201ENSMUST00000027068 Rpl35aO55142 110 aa13.64□□□□□ -0.23
Tram1-201ENSMUST00000027068 Rnase1P00683 149 aa13.64□□□□□ -0.23
Tram1-201ENSMUST00000027068 Cox6b1P56391 86 aaKnown RBP13.64□□□□□ -0.23
Tram1-201ENSMUST00000027068 Gm7102J3QQ10 178 aa13.63□□□□□ -0.23
Tram1-201ENSMUST00000027068 Gm10577Q3UDV9 132 aa13.63□□□□□ -0.23
Tram1-201ENSMUST00000027068 4930546C10RikE9Q4Y3 121 aa13.63□□□□□ -0.23
Tram1-201ENSMUST00000027068 Cops9Q3U898 57 aa13.63□□□□□ -0.23
Tram1-201ENSMUST00000027068 Tmem243B2RVB9 118 aa13.63□□□□□ -0.23
Tram1-201ENSMUST00000027068 Rps28P62858 69 aaKnown RBP13.63□□□□□ -0.23
Tram1-201ENSMUST00000027068 CrygaP04345 174 aa13.62□□□□□ -0.23
Tram1-201ENSMUST00000027068 Pdzd2E9Q1M1 2796 aa13.62□□□□□ -0.23
Tram1-201ENSMUST00000027068 GfyJ3KML8 504 aa13.62□□□□□ -0.23
Tram1-201ENSMUST00000027068 4930524J08RikQ9CUJ5 163 aa13.61□□□□□ -0.23
Tram1-201ENSMUST00000027068 Ppp1r32Q148A4 427 aa13.61□□□□□ -0.23
Tram1-201ENSMUST00000027068 Lage3Q9CR70 148 aa13.61□□□□□ -0.23
Tram1-201ENSMUST00000027068 Spata25Q9DA57 226 aa13.6□□□□□ -0.23
Tram1-201ENSMUST00000027068 Brwd1Q921C3 2304 aa13.59□□□□□ -0.23
Tram1-201ENSMUST00000027068 9430015G10RikA2ASP7 199 aa13.59□□□□□ -0.23
Tram1-201ENSMUST00000027068 Mrpl55Q9CZ83 127 aa13.59□□□□□ -0.23
Tram1-201ENSMUST00000027068 Ighv8-11A0A075B5X4 119 aa13.59□□□□□ -0.23
Tram1-201ENSMUST00000027068 Igkv6-13A0A0G2JGY3 119 aa13.59□□□□□ -0.23
Tram1-201ENSMUST00000027068 Cystm1Q8K353 104 aa13.59□□□□□ -0.23
Tram1-201ENSMUST00000027068 Tomm7Q9D173 55 aa13.59□□□□□ -0.23
Tram1-201ENSMUST00000027068 Trav13n-2A0A0G2JF93 110 aa13.58□□□□□ -0.24
Tram1-201ENSMUST00000027068 Trav13-1A0A075B644 110 aa13.58□□□□□ -0.24
Tram1-201ENSMUST00000027068 Xcl1P47993 114 aa13.58□□□□□ -0.24
Tram1-201ENSMUST00000027068 Gm10549Q3URY4 149 aa13.58□□□□□ -0.24
Tram1-201ENSMUST00000027068 Tm2d2Q8R0I4 213 aa13.57□□□□□ -0.24
Tram1-201ENSMUST00000027068 MtorQ9JLN9 2549 aa13.57□□□□□ -0.24
Tram1-201ENSMUST00000027068 Rpl28P41105 137 aaKnown RBP13.57□□□□□ -0.24
Tram1-201ENSMUST00000027068 Gm10772F7AIG4 85 aa13.57□□□□□ -0.24
Tram1-201ENSMUST00000027068 Kmt2bO08550 2713 aa13.56□□□□□ -0.24
Tram1-201ENSMUST00000027068 Defb50Q6TU36 73 aa13.56□□□□□ -0.24
Tram1-201ENSMUST00000027068 Ccl21aP84444 133 aa13.55□□□□□ -0.24
Tram1-201ENSMUST00000027068 Ccl21bP86792 133 aa13.55□□□□□ -0.24
Tram1-201ENSMUST00000027068 Ccl21cP86793 133 aa13.55□□□□□ -0.24
Tram1-201ENSMUST00000027068 Prh1P05142 261 aa13.55□□□□□ -0.24
Tram1-201ENSMUST00000027068 Tmem258P61166 79 aa13.55□□□□□ -0.24
Tram1-201ENSMUST00000027068 Gm28374F6SG70 93 aa13.54□□□□□ -0.24
Tram1-201ENSMUST00000027068 CrygeQ03740 174 aa13.54□□□□□ -0.24
Tram1-201ENSMUST00000027068 A830031A19RikQ8BNT5 113 aa13.54□□□□□ -0.24
Tram1-201ENSMUST00000027068 Znf414Q9DCK4 299 aa13.54□□□□□ -0.24
Tram1-201ENSMUST00000027068 Ankrd17Q99NH0 2603 aaKnown RBP13.53□□□□□ -0.24
Tram1-201ENSMUST00000027068 C2cd3Q52KB6 2323 aa13.53□□□□□ -0.24
Tram1-201ENSMUST00000027068 Igkv1-99F6XWB2 120 aa13.52□□□□□ -0.24
Tram1-201ENSMUST00000027068 MifP34884 115 aaKnown RBP13.52□□□□□ -0.24
Tram1-201ENSMUST00000027068 Rpl18aP62717 176 aaKnown RBP13.52□□□□□ -0.24
Tram1-201ENSMUST00000027068 Dnal4Q9DCM4 105 aa13.52□□□□□ -0.24
Tram1-201ENSMUST00000027068 FlnaQ8BTM8 2647 aaKnown RBP13.52□□□□□ -0.25
Tram1-201ENSMUST00000027068 Zfand2aQ9JII7 171 aa13.52□□□□□ -0.25
Tram1-201ENSMUST00000027068 MobpQ9D2P8 170 aa13.51□□□□□ -0.25
Tram1-201ENSMUST00000027068 Gm16381A0A1Y7VKT9 73 aa13.51□□□□□ -0.25
Tram1-201ENSMUST00000027068 Hbb-b2P02089 147 aa13.5□□□□□ -0.25
Tram1-201ENSMUST00000027068 H2al1aQ5M8Q2 105 aa13.5□□□□□ -0.25
Tram1-201ENSMUST00000027068 Hectd1Q69ZR2 2618 aaKnown RBP13.5□□□□□ -0.25
Tram1-201ENSMUST00000027068 Tenm3Q9WTS6 2715 aa13.5□□□□□ -0.25
Tram1-201ENSMUST00000027068 Defb26Q30KN7 186 aa13.5□□□□□ -0.25
Tram1-201ENSMUST00000027068 Gpha2Q925Q5 128 aa13.5□□□□□ -0.25
Tram1-201ENSMUST00000027068 Akap13E9Q394 2776 aa13.49□□□□□ -0.25
Tram1-201ENSMUST00000027068 Hist1h4aP62806 103 aaKnown RBP13.48□□□□□ -0.25
Tram1-201ENSMUST00000027068 Serp2Q6TAW2 65 aa13.48□□□□□ -0.25
Tram1-201ENSMUST00000027068 4930519P11RikQ9CUJ8 166 aa13.48□□□□□ -0.25
Tram1-201ENSMUST00000027068 BsnO88737 3942 aa13.48□□□□□ -0.25
Tram1-201ENSMUST00000027068 Smim26Q3V460 107 aa13.47□□□□□ -0.25
Tram1-201ENSMUST00000027068 Ighv2-9-1A0A075B697 116 aa13.46□□□□□ -0.25
Tram1-201ENSMUST00000027068 Gm19935A0A1B0GSF9 52 aa13.46□□□□□ -0.25
Tram1-201ENSMUST00000027068 4930535I16RikQ9CUI2 172 aa13.46□□□□□ -0.25
Tram1-201ENSMUST00000027068 Gm10337F7DEP7 55 aa13.46□□□□□ -0.25
Tram1-201ENSMUST00000027068 Ighv13-2A0A0A6YWN3 119 aa13.45□□□□□ -0.26
Tram1-201ENSMUST00000027068 Acyp1P56376 99 aa13.45□□□□□ -0.26
Tram1-201ENSMUST00000027068 Defa20Q45VN2 95 aa13.45□□□□□ -0.26
Tram1-201ENSMUST00000027068 Pla2g1bQ9Z0Y2 146 aa13.45□□□□□ -0.26
Tram1-201ENSMUST00000027068 SnurfQ9WU12 71 aa13.44□□□□□ -0.26
Tram1-201ENSMUST00000027068 NipblQ6KCD5 2798 aaKnown RBP13.44□□□□□ -0.26
Tram1-201ENSMUST00000027068 1810062G17RikG3X8Y2 129 aa13.43□□□□□ -0.26
Tram1-201ENSMUST00000027068 Usp9yF8VPU6 2556 aa13.43□□□□□ -0.26
Tram1-201ENSMUST00000027068 Krtap16-1A2A5X5 502 aa13.43□□□□□ -0.26
Tram1-201ENSMUST00000027068 B230307C23RikQ8BLB2 64 aa13.43□□□□□ -0.26
Tram1-201ENSMUST00000027068 Chchd7Q8K2Q5 85 aa13.43□□□□□ -0.26
Tram1-201ENSMUST00000027068 Trav13-2A0A075B649 110 aa13.42□□□□□ -0.26
Tram1-201ENSMUST00000027068 Igkv4-72A0A0B4J1I4 117 aa13.42□□□□□ -0.26
Tram1-201ENSMUST00000027068 Gm5142Q8C5X9 133 aa13.42□□□□□ -0.26
Tram1-201ENSMUST00000027068 Vpreb1P13372 142 aa13.42□□□□□ -0.26
Tram1-201ENSMUST00000027068 Usp24B1AY13 2617 aaKnown RBP13.41□□□□□ -0.26
Tram1-201ENSMUST00000027068 Rpl39lQ9CQD0 51 aa13.41□□□□□ -0.26
Tram1-201ENSMUST00000027068 BaalcQ8VHV1 145 aa13.4□□□□□ -0.26
Tram1-201ENSMUST00000027068 2010109I03RikQ9CQ11 111 aa13.4□□□□□ -0.26
Tram1-201ENSMUST00000027068 Hspg2Q05793 3707 aaKnown RBP13.4□□□□□ -0.26
Tram1-201ENSMUST00000027068 Zfp462B1AWL2 2495 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms