RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 Prp2P05143 317 aa14.28□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Lgals4Q8K419 326 aa14.27□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Lage3Q9CR70 148 aa14.27□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Cox8cA6H666 72 aa14.27□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Gm11020F6ZGD5 61 aa14.27□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Trav13d-4A0A0G2JFX3 110 aa14.26□□□□□ -0.13
Cdx1-201ENSMUST00000025521 AtrQ9JKK8 2635 aa14.25□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Trav7-6A0A075B640 112 aa14.25□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Trav9d-4A0A0G2JG37 103 aa14.25□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Lst1O08843 95 aa14.25□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Cox6cQ9CPQ1 76 aa14.25□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Gm29423A0A087WRM1 55 aa14.24□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Igkv1-99F6XWB2 120 aa14.24□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Gm10549Q3URY4 149 aa14.24□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Eif4ebp3Q80VV3 101 aa14.24□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Cby1Q9D1C2 127 aa14.24□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Trav3-1Q5R1I8 114 aa14.24□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Higd2aQ9CQJ1 106 aa14.24□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Spry2Q9QXV8 315 aa14.24□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Ly6hQ9WUC3 139 aa14.24□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Sigmar1O55242 223 aa14.23□□□□□ -0.13
Cdx1-201ENSMUST00000025521 E130114P18RikF6S0S7 154 aa14.22□□□□□ -0.13
Cdx1-201ENSMUST00000025521 MalO09198 153 aa14.22□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Wdr38Q9D994 303 aa14.22□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Notch2O35516 2470 aa14.21□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Igkv6-13A0A0G2JGY3 119 aa14.21□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Phpt1Q9DAK9 124 aa14.21□□□□□ -0.13
Cdx1-201ENSMUST00000025521 Ighv2-9-1A0A075B697 116 aa14.2□□□□□ -0.14
Cdx1-201ENSMUST00000025521 Igkv3-9A0A140T8P4 119 aa14.2□□□□□ -0.14
Cdx1-201ENSMUST00000025521 Ighv8-13A0A075B5Y0 101 aa14.19□□□□□ -0.14
Cdx1-201ENSMUST00000025521 PolqQ8CGS6 2544 aa14.18□□□□□ -0.14
Cdx1-201ENSMUST00000025521 P01755 137 aa14.18□□□□□ -0.14
Cdx1-201ENSMUST00000025521 Mzt1Q8BUR9 78 aa14.18□□□□□ -0.14
Cdx1-201ENSMUST00000025521 4930544G11RikQ9CR99 193 aa14.17□□□□□ -0.14
Cdx1-201ENSMUST00000025521 Phxr5P08399 672 aa14.16□□□□□ -0.14
Cdx1-201ENSMUST00000025521 SelenowP63300 88 aa14.15□□□□□ -0.14
Cdx1-201ENSMUST00000025521 9530053A07RikE9PVG8 2581 aa14.15□□□□□ -0.14
Cdx1-201ENSMUST00000025521 PemtQ61907 199 aa14.14□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Cdip1Q9DB75 208 aa14.14□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Gm10647E9Q8X0 124 aa14.13□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Rpl28P41105 137 aaKnown RBP14.13□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Gm4861Q8C5A4 106 aa14.13□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Q9DAQ5 155 aa14.13□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Ighv8-11A0A075B5X4 119 aa14.12□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Gm28269A0A087WSG3 125 aa14.12□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Trav9n-4A0A075B631 113 aa14.11□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Fn1P11276 2477 aaKnown RBP14.11□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Insl3O09107 122 aa14.11□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Tcl1b3P56842 122 aa14.11□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Ube2wQ8VDW4 151 aa14.1□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Pfn2Q9JJV2 140 aa14.1□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Ndufa12Q7TMF3 145 aaKnown RBP14.09□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Cryba4Q9JJV0 196 aa14.09□□□□□ -0.15
Cdx1-201ENSMUST00000025521 B230359F08RikA0A0B4J1K3 109 aa14.09□□□□□ -0.15
Cdx1-201ENSMUST00000025521 SpinklQ8CEK3 90 aa14.09□□□□□ -0.15
Cdx1-201ENSMUST00000025521 Stab1Q8R4Y4 2571 aa14.08□□□□□ -0.16
Cdx1-201ENSMUST00000025521 Cks1bP61025 79 aa14.08□□□□□ -0.16
Cdx1-201ENSMUST00000025521 Tmem86bQ497J1 226 aa14.08□□□□□ -0.16
Cdx1-201ENSMUST00000025521 Prss58Q8BW11 241 aa14.07□□□□□ -0.16
Cdx1-201ENSMUST00000025521 Bles03Q8VD62 251 aa14.07□□□□□ -0.16
Cdx1-201ENSMUST00000025521 Hivep1Q03172 2688 aa14.06□□□□□ -0.16
Cdx1-201ENSMUST00000025521 Gm867A0A1W2P7T4 151 aa14.06□□□□□ -0.16
Cdx1-201ENSMUST00000025521 Tcl1b5P56845 121 aa14.06□□□□□ -0.16
Cdx1-201ENSMUST00000025521 Igkv1-117A0A140T8M0 119 aa14.06□□□□□ -0.16
Cdx1-201ENSMUST00000025521 BatfO35284 125 aa14.05□□□□□ -0.16
Cdx1-201ENSMUST00000025521 Kmt2aP55200 3966 aa14.05□□□□□ -0.16
Cdx1-201ENSMUST00000025521 Gm12057A0A087WR21 115 aa14.04□□□□□ -0.16
Cdx1-201ENSMUST00000025521 Ighv1-56A0A0A6YXG2 117 aa14.02□□□□□ -0.16
Cdx1-201ENSMUST00000025521 2010109I03RikQ9CQ11 111 aa14.02□□□□□ -0.16
Cdx1-201ENSMUST00000025521 Ighv2-9A0A075B5Q5 116 aa14.01□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Gm9903Q8C9Y8 129 aa14.01□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Srrm2Q8BTI8 2703 aaKnown RBP14.01□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Gm11213A0A1B0GR83 88 aa14.01□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Krtap11-1E9Q2E9 183 aa14.01□□□□□ -0.17
Cdx1-201ENSMUST00000025521 C530025M09RikF6RGA8 229 aa14.01□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Prh1P05142 261 aa14.01□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Pglyrp4Q0VB07 374 aa14□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Gm10767Q3TQP0 103 aa14□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Igkv3-1A0A075B5P1 119 aa13.99□□□□□ -0.17
Cdx1-201ENSMUST00000025521 EnhoQ8K1D8 76 aa13.99□□□□□ -0.17
Cdx1-201ENSMUST00000025521 ApcQ61315 2845 aa13.99□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Igkv8-34A0A0G2JDU0 121 aa13.99□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Gm16381A0A1Y7VKT9 73 aa13.99□□□□□ -0.17
Cdx1-201ENSMUST00000025521 1700020N15RikL7MTX3 112 aa13.99□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Acyp1P56376 99 aa13.99□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Csdc2Q91YQ3 154 aa13.99□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Xlr5cQ9JJR2 179 aa13.99□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Smim26Q3V460 107 aa13.98□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Snhg11Q4G0K9 87 aa13.98□□□□□ -0.17
Cdx1-201ENSMUST00000025521 6430550D23RikE9Q1X6 194 aa13.96□□□□□ -0.17
Cdx1-201ENSMUST00000025521 FlnbQ80X90 2602 aaKnown RBP13.96□□□□□ -0.17
Cdx1-201ENSMUST00000025521 Igkv8-18A0A0B4J1J3 123 aa13.96□□□□□ -0.18
Cdx1-201ENSMUST00000025521 E130208F15RikQ3UPV3 143 aa13.96□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Dppa2Q9CWH0 301 aa13.96□□□□□ -0.18
Cdx1-201ENSMUST00000025521 4930556J24RikQ9D4U7 146 aa13.96□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Nsd1O88491 2588 aaKnown RBP13.95□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Trav13-1A0A075B644 110 aa13.94□□□□□ -0.18
Cdx1-201ENSMUST00000025521 Wfdc17Q5SSJ1 76 aa13.94□□□□□ -0.18
Cdx1-201ENSMUST00000025521 TeppQ6IMH0 216 aa13.94□□□□□ -0.18
Cdx1-201ENSMUST00000025521 4930524J08RikQ9CUJ5 163 aa13.94□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms