RNA–Protein interactions for RNA: ENSMUST00000022623.12

Trim35-201, Transcript of Tripartite motif-containing protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim35, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35-201ENSMUST00000022623 Defa21Q8C1P2 93 aa8.48□□□□□ -1.05
Trim35-201ENSMUST00000022623 Ifitm1Q9D103 106 aa8.48□□□□□ -1.05
Trim35-201ENSMUST00000022623 Igkv1-99F6XWB2 120 aa8.47□□□□□ -1.05
Trim35-201ENSMUST00000022623 Igkv4-78A0A0A6YYE5 119 aa8.46□□□□□ -1.05
Trim35-201ENSMUST00000022623 Trav13n-1A0A0G2JEU8 110 aa8.46□□□□□ -1.05
Trim35-201ENSMUST00000022623 Smim1P0C8K7 78 aa8.46□□□□□ -1.05
Trim35-201ENSMUST00000022623 Prelid3aQ8VE85 172 aa8.46□□□□□ -1.05
Trim35-201ENSMUST00000022623 Trav4d-3A0A075B625 110 aa8.46□□□□□ -1.06
Trim35-201ENSMUST00000022623 Gm21748Q3UE70 102 aa8.46□□□□□ -1.06
Trim35-201ENSMUST00000022623 CirbpP60824 172 aaKnown RBP8.45□□□□□ -1.06
Trim35-201ENSMUST00000022623 Gemin7Q9CWY4 129 aa8.45□□□□□ -1.06
Trim35-201ENSMUST00000022623 Krtap27-1E9PX37 202 aa8.45□□□□□ -1.06
Trim35-201ENSMUST00000022623 Dad1P61804 113 aa8.45□□□□□ -1.06
Trim35-201ENSMUST00000022623 Cfap126Q6P8X9 189 aa8.44□□□□□ -1.06
Trim35-201ENSMUST00000022623 Helz2E9QAM5 2947 aaKnown RBP8.44□□□□□ -1.06
Trim35-201ENSMUST00000022623 Ighv1-11A0A0A6YWI9 117 aa8.44□□□□□ -1.06
Trim35-201ENSMUST00000022623 9530053A07RikE9PVG8 2581 aa8.44□□□□□ -1.06
Trim35-201ENSMUST00000022623 Zc2hc1bQ9D534 172 aa8.44□□□□□ -1.06
Trim35-201ENSMUST00000022623 Trav13-4-dv7A0A075B6C2 110 aa8.43□□□□□ -1.06
Trim35-201ENSMUST00000022623 Gm10767Q3TQP0 103 aa8.43□□□□□ -1.06
Trim35-201ENSMUST00000022623 Rnf152Q8BG47 203 aa8.43□□□□□ -1.06
Trim35-201ENSMUST00000022623 CrygfQ9CXV3 174 aa8.43□□□□□ -1.06
Trim35-201ENSMUST00000022623 Higd2aQ9CQJ1 106 aa8.43□□□□□ -1.06
Trim35-201ENSMUST00000022623 Pfn2Q9JJV2 140 aa8.43□□□□□ -1.06
Trim35-201ENSMUST00000022623 Pla2g1bQ9Z0Y2 146 aa8.43□□□□□ -1.06
Trim35-201ENSMUST00000022623 Fgfbp3Q1HCM0 245 aa8.43□□□□□ -1.06
Trim35-201ENSMUST00000022623 TeppQ6IMH0 216 aa8.43□□□□□ -1.06
Trim35-201ENSMUST00000022623 Klk11Q9QYN3 276 aa8.43□□□□□ -1.06
Trim35-201ENSMUST00000022623 Lypd5Q9D7Z7 256 aa8.42□□□□□ -1.06
Trim35-201ENSMUST00000022623 Ube2d1P61080 147 aaKnown RBP8.42□□□□□ -1.06
Trim35-201ENSMUST00000022623 PrcdQ00LT2 53 aa8.42□□□□□ -1.06
Trim35-201ENSMUST00000022623 4930415O20RikQ8CDT5 131 aa8.42□□□□□ -1.06
Trim35-201ENSMUST00000022623 Trav9d-4A0A0G2JG37 103 aa8.41□□□□□ -1.06
Trim35-201ENSMUST00000022623 Gm11213A0A1B0GR83 88 aa8.41□□□□□ -1.06
Trim35-201ENSMUST00000022623 Gm10295Q8CCF3 114 aa8.41□□□□□ -1.06
Trim35-201ENSMUST00000022623 Trav4n-4A0A075B615 110 aa8.41□□□□□ -1.06
Trim35-201ENSMUST00000022623 Gm29423A0A087WRM1 55 aa8.41□□□□□ -1.06
Trim35-201ENSMUST00000022623 Fxyd5P97808 178 aa8.41□□□□□ -1.06
Trim35-201ENSMUST00000022623 Sslp1Q3UN54 99 aa8.4□□□□□ -1.06
Trim35-201ENSMUST00000022623 Igf1P05017 153 aa8.4□□□□□ -1.06
Trim35-201ENSMUST00000022623 BC025920Q3US60 128 aa8.4□□□□□ -1.06
Trim35-201ENSMUST00000022623 Fn1P11276 2477 aaKnown RBP8.4□□□□□ -1.07
Trim35-201ENSMUST00000022623 Igkv4-79A0A075B5L8 119 aa8.4□□□□□ -1.07
Trim35-201ENSMUST00000022623 Trav13d-4A0A0G2JFX3 110 aa8.4□□□□□ -1.07
Trim35-201ENSMUST00000022623 E130218I03RikA0A0U1RNU5 63 aa8.4□□□□□ -1.07
Trim35-201ENSMUST00000022623 Defb47Q30KN1 79 aa8.4□□□□□ -1.07
Trim35-201ENSMUST00000022623 MifP34884 115 aaKnown RBP8.39□□□□□ -1.07
Trim35-201ENSMUST00000022623 Ighv13-2A0A0A6YWN3 119 aa8.38□□□□□ -1.07
Trim35-201ENSMUST00000022623 Tmem243B2RVB9 118 aa8.38□□□□□ -1.07
Trim35-201ENSMUST00000022623 Ighv1-61P01749 117 aa8.37□□□□□ -1.07
Trim35-201ENSMUST00000022623 Ighv2-6-8A0A0A6YWY9 116 aa8.36□□□□□ -1.07
Trim35-201ENSMUST00000022623 P01745 121 aa8.36□□□□□ -1.07
Trim35-201ENSMUST00000022623 Cmc4Q61908 68 aa8.36□□□□□ -1.07
Trim35-201ENSMUST00000022623 Igsf10Q3V1M1 2594 aa8.36□□□□□ -1.07
Trim35-201ENSMUST00000022623 Gm10135F6TEE5 83 aa8.35□□□□□ -1.07
Trim35-201ENSMUST00000022623 P01823 113 aa8.35□□□□□ -1.07
Trim35-201ENSMUST00000022623 GhrhP16043 103 aa8.35□□□□□ -1.07
Trim35-201ENSMUST00000022623 B230359F08RikA0A0B4J1K3 109 aa8.35□□□□□ -1.07
Trim35-201ENSMUST00000022623 Phpt1Q9DAK9 124 aa8.35□□□□□ -1.07
Trim35-201ENSMUST00000022623 Dph3Q8K0W9 82 aa8.35□□□□□ -1.07
Trim35-201ENSMUST00000022623 Igkv4-54A0A0G2JES9 117 aa8.34□□□□□ -1.07
Trim35-201ENSMUST00000022623 Znf740Q6NZQ6 180 aa8.34□□□□□ -1.07
Trim35-201ENSMUST00000022623 CdsnQ7TPC1 561 aa8.34□□□□□ -1.07
Trim35-201ENSMUST00000022623 D730001G18RikA0A087WQU7 115 aa8.34□□□□□ -1.07
Trim35-201ENSMUST00000022623 Defb45Q3V490 66 aa8.34□□□□□ -1.07
Trim35-201ENSMUST00000022623 PemtQ61907 199 aa8.34□□□□□ -1.07
Trim35-201ENSMUST00000022623 Glrp1E9Q9S8 174 aa8.34□□□□□ -1.07
Trim35-201ENSMUST00000022623 Trav7-6A0A075B640 112 aa8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 Hbb-b2P02089 147 aa8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 Gm4861Q8C5A4 106 aa8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 9430069I07RikQ9CX21 111 aa8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 Crip2Q9DCT8 208 aaKnown RBP8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 FasnP19096 2504 aaKnown RBP8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 Ighv1-5A0A0A6YWG2 117 aa8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 Chchd7Q8K2Q5 85 aa8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 Tm2d2Q8R0I4 213 aa8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 Cox6cQ9CPQ1 76 aa8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 Gm17472A0A075B683 117 aa8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 7530416G11RikJ3QJX6 159 aa8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 Ppp1r32Q148A4 427 aa8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 Serp2Q6TAW2 65 aa8.33□□□□□ -1.08
Trim35-201ENSMUST00000022623 Igkv3-1A0A075B5P1 119 aa8.32□□□□□ -1.08
Trim35-201ENSMUST00000022623 Morn5Q9DAI9 170 aa8.32□□□□□ -1.08
Trim35-201ENSMUST00000022623 Gm7138L7N2C3 230 aa8.32□□□□□ -1.08
Trim35-201ENSMUST00000022623 Cdc42se2Q8BGH7 84 aa8.32□□□□□ -1.08
Trim35-201ENSMUST00000022623 Gm3238W4VSP7 230 aa8.32□□□□□ -1.08
Trim35-201ENSMUST00000022623 Defa28D3Z1V9 94 aa8.31□□□□□ -1.08
Trim35-201ENSMUST00000022623 Xcl1P47993 114 aa8.31□□□□□ -1.08
Trim35-201ENSMUST00000022623 3110070M22RikQ9DAQ7 118 aa8.31□□□□□ -1.08
Trim35-201ENSMUST00000022623 Ighv1-62-1A0A075B5U3 116 aa8.31□□□□□ -1.08
Trim35-201ENSMUST00000022623 Trav11A0A0B4J1J9 114 aa8.31□□□□□ -1.08
Trim35-201ENSMUST00000022623 Igkv3-9A0A140T8P4 119 aa8.31□□□□□ -1.08
Trim35-201ENSMUST00000022623 Cops9Q3U898 57 aa8.31□□□□□ -1.08
Trim35-201ENSMUST00000022623 Gm9747Q810H1 104 aa8.31□□□□□ -1.08
Trim35-201ENSMUST00000022623 NpwA0A1L1STR8 176 aa8.3□□□□□ -1.08
Trim35-201ENSMUST00000022623 Trav14d-3-dv8A0A075B619 120 aa8.3□□□□□ -1.08
Trim35-201ENSMUST00000022623 Plac8l1Q08EJ0 177 aa8.3□□□□□ -1.08
Trim35-201ENSMUST00000022623 Fam19a1Q7TPG8 133 aa8.3□□□□□ -1.08
Trim35-201ENSMUST00000022623 Igkv4-72A0A0B4J1I4 117 aa8.29□□□□□ -1.08
Trim35-201ENSMUST00000022623 Igkv8-34A0A0G2JDU0 121 aa8.29□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms