RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Rnf152Q8BG47 203 aa8.29□□□□□ -1.08
Sdc1-201ENSMUST00000020911 A130051J06RikQ8CAU1 227 aa8.29□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Ighv1-53A0A075B5W3 117 aa8.28□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Ighv1-12A0A0A6YXJ9 117 aa8.28□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Usmg5Q78IK2 58 aa8.28□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Ppp1r32Q148A4 427 aa8.28□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Notch3Q61982 2318 aa8.27□□□□□ -1.08
Sdc1-201ENSMUST00000020911 1500011B03RikQ3TTH7 73 aa8.27□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Odf1Q61999 247 aa8.27□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Igkv4-70A0A0B4J1I5 116 aa8.26□□□□□ -1.09
Sdc1-201ENSMUST00000020911 B230217C12RikE9Q3Z1 139 aa8.26□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Fam19a3Q7TPG6 132 aa8.26□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Col7a1Q63870 2944 aa8.26□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Epg5Q80TA9 2572 aa8.26□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Trbv13-2A0A140T8N6 113 aa8.26□□□□□ -1.09
Sdc1-201ENSMUST00000020911 P01823 113 aa8.26□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Vmo1Q5SXG7 201 aa8.26□□□□□ -1.09
Sdc1-201ENSMUST00000020911 3110070M22RikQ9DAQ7 118 aa8.26□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Ndufs7Q9DC70 224 aa8.26□□□□□ -1.09
Sdc1-201ENSMUST00000020911 CubnQ9JLB4 3623 aa8.25□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Igfn1Q3KNY0 2849 aa8.25□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Trbv16A0A0B4J1H3 115 aa8.25□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Gm10542F6XDR3 90 aa8.25□□□□□ -1.09
Sdc1-201ENSMUST00000020911 1700010B08RikQ9DAI7 102 aa8.25□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Zfp462B1AWL2 2495 aaKnown RBP8.25□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Mast4Q811L6 2618 aa8.24□□□□□ -1.09
Sdc1-201ENSMUST00000020911 E130208F15RikQ3UPV3 143 aa8.24□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Cd164Q9R0L9 197 aa8.24□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Pdzd2E9Q1M1 2796 aa8.24□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Trav9d-4A0A0G2JG37 103 aa8.24□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Prp2P05143 317 aa8.24□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Spink8Q09TK9 105 aa8.24□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Trav13n-2A0A0G2JF93 110 aa8.24□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Usp9yF8VPU6 2556 aa8.24□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Ighv1-82A0A0G2JEU7 117 aa8.23□□□□□ -1.09
Sdc1-201ENSMUST00000020911 1700011M02RikB1AX35 88 aa8.23□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Gm10226O88253 85 aa8.23□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Spint4Q9D263 159 aa8.23□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Ighv1-75A0A075B5Y2 117 aa8.23□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Ighv1-85A0A075B5Y6 117 aa8.23□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Gm10647E9Q8X0 124 aa8.22□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Cops9Q3U898 57 aa8.22□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Ighv1-66A0A075B5X5 117 aa8.22□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Igkv1-117A0A140T8M0 119 aa8.22□□□□□ -1.09
Sdc1-201ENSMUST00000020911 1810062G17RikG3X8Y2 129 aa8.22□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Vpreb2P13373 142 aa8.22□□□□□ -1.09
Sdc1-201ENSMUST00000020911 FlnbQ80X90 2602 aaKnown RBP8.22□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Setd2E9Q5F9 2537 aa8.22□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Ighv3-3A0A0A6YWL2 116 aa8.22□□□□□ -1.09
Sdc1-201ENSMUST00000020911 P01750 117 aa8.22□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Rpl36aP83882 106 aaKnown RBP8.22□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Ndufa12Q7TMF3 145 aaKnown RBP8.22□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Ifitm6A0A1B0GS75 124 aa8.21□□□□□ -1.09
Sdc1-201ENSMUST00000020911 CrygfQ9CXV3 174 aa8.21□□□□□ -1.09
Sdc1-201ENSMUST00000020911 Ighv1-64A0A075B5X3 117 aa8.2□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Igkv4-53A0A0G2JFC6 119 aa8.2□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Igkv8-21A0A140T8P7 120 aa8.2□□□□□ -1.1
Sdc1-201ENSMUST00000020911 LhbO09108 141 aa8.2□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Pglyrp1O88593 182 aa8.2□□□□□ -1.1
Sdc1-201ENSMUST00000020911 C2cd3Q52KB6 2323 aa8.2□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Ighv1-50A0A075B5W1 117 aa8.2□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Ighv2-3A0A075B696 115 aa8.2□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Ighv2-6-8A0A0A6YWY9 116 aa8.2□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Krtap27-1E9PX37 202 aa8.2□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Dynlrb2Q9DAJ5 96 aa8.2□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Defb2P82020 71 aa8.19□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Mapk1ip1lQ8BH93 242 aa8.19□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Ufsp1Q9CZP0 217 aa8.19□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Acyp1P56376 99 aa8.19□□□□□ -1.1
Sdc1-201ENSMUST00000020911 A930002H24RikQ8C8Y3 163 aa8.19□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Trav9-2A0A075B647 113 aa8.18□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Trav9-4A0A0B4J1K2 113 aa8.18□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Igkv2-109A0A075B5K6 120 aa8.18□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Gm16381A0A1Y7VKT9 73 aa8.18□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Q9DAA7 145 aa8.18□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Brwd1Q921C3 2304 aa8.17□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Ighv2-7A0A075B5Q8 116 aa8.17□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Defb26Q30KN7 186 aa8.17□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Tenm3Q9WTS6 2715 aa8.17□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Trav14-1A0A0G2JF94 121 aa8.16□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Lage3Q9CR70 148 aa8.16□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Gm20499D3Z4G5 72 aa8.16□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Wfdc15aQ8BH89 80 aa8.16□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Akap13E9Q394 2776 aa8.15□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Trdv5A0A075B661 115 aa8.15□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Cox7a1P56392 80 aa8.15□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Ifitm1Q9D103 106 aa8.15□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Ubl5Q9EPV8 73 aa8.15□□□□□ -1.1
Sdc1-201ENSMUST00000020911 Gm10570F6VB42 170 aa8.15□□□□□ -1.11
Sdc1-201ENSMUST00000020911 Gm11565A2A4M7 156 aa8.14□□□□□ -1.11
Sdc1-201ENSMUST00000020911 Xirp2Q4U4S6 3784 aa8.14□□□□□ -1.11
Sdc1-201ENSMUST00000020911 Gm17689B3GLJ4 109 aa8.14□□□□□ -1.11
Sdc1-201ENSMUST00000020911 Lamtor3O88653 124 aa8.14□□□□□ -1.11
Sdc1-201ENSMUST00000020911 Igkv4-78A0A0A6YYE5 119 aa8.13□□□□□ -1.11
Sdc1-201ENSMUST00000020911 Igkv1-110A0A0B4J1I0 119 aa8.13□□□□□ -1.11
Sdc1-201ENSMUST00000020911 P01753 117 aa8.13□□□□□ -1.11
Sdc1-201ENSMUST00000020911 B230359F08RikA0A0B4J1K3 109 aa8.13□□□□□ -1.11
Sdc1-201ENSMUST00000020911 1810032O08RikE9PZV8 113 aa8.12□□□□□ -1.11
Sdc1-201ENSMUST00000020911 4930546C10RikE9Q4Y3 121 aa8.12□□□□□ -1.11
Sdc1-201ENSMUST00000020911 E130114P18RikF6S0S7 154 aa8.12□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms