RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 A930009A15RikG3UYI6 118 aa9.18□□□□□ -0.94
Msh6-201ENSMUST00000005503 TeppQ6IMH0 216 aa9.18□□□□□ -0.94
Msh6-201ENSMUST00000005503 Igkv8-34A0A0G2JDU0 121 aa9.17□□□□□ -0.94
Msh6-201ENSMUST00000005503 Rpl18aP62717 176 aaKnown RBP9.17□□□□□ -0.94
Msh6-201ENSMUST00000005503 Smr3aQ61900 147 aa9.17□□□□□ -0.94
Msh6-201ENSMUST00000005503 Cep192E9Q4Y4 2514 aaKnown RBP9.17□□□□□ -0.94
Msh6-201ENSMUST00000005503 Gm3618D3Z4P5 127 aa9.17□□□□□ -0.94
Msh6-201ENSMUST00000005503 Eif4ebp1Q60876 117 aa9.17□□□□□ -0.94
Msh6-201ENSMUST00000005503 BC048502Q80Y74 154 aa9.17□□□□□ -0.94
Msh6-201ENSMUST00000005503 Gm2916Q9D9B9 127 aa9.17□□□□□ -0.94
Msh6-201ENSMUST00000005503 Dchs1E9PVD3 3291 aa9.17□□□□□ -0.94
Msh6-201ENSMUST00000005503 Myo15aQ9QZZ4 3511 aa9.17□□□□□ -0.94
Msh6-201ENSMUST00000005503 Sslp1Q3UN54 99 aa9.17□□□□□ -0.94
Msh6-201ENSMUST00000005503 Wdfy4E9Q2M9 3149 aa9.17□□□□□ -0.94
Msh6-201ENSMUST00000005503 Spata25Q9DA57 226 aa9.16□□□□□ -0.94
Msh6-201ENSMUST00000005503 Gm10322F7D7I4 111 aa9.16□□□□□ -0.94
Msh6-201ENSMUST00000005503 Trav9n-4A0A075B631 113 aa9.15□□□□□ -0.94
Msh6-201ENSMUST00000005503 Cdc42se2Q8BGH7 84 aa9.15□□□□□ -0.94
Msh6-201ENSMUST00000005503 Wfdc15aQ8BH89 80 aa9.15□□□□□ -0.94
Msh6-201ENSMUST00000005503 Wfdc12Q9JHY3 85 aa9.15□□□□□ -0.94
Msh6-201ENSMUST00000005503 CrygdP04342 174 aa9.15□□□□□ -0.94
Msh6-201ENSMUST00000005503 EnhoQ8K1D8 76 aa9.15□□□□□ -0.94
Msh6-201ENSMUST00000005503 A0A286YE02 88 aa9.14□□□□□ -0.95
Msh6-201ENSMUST00000005503 Defb12Q8K4N3 78 aa9.14□□□□□ -0.95
Msh6-201ENSMUST00000005503 Higd2aQ9CQJ1 106 aa9.14□□□□□ -0.95
Msh6-201ENSMUST00000005503 Wdfy3Q6VNB8 3508 aa9.13□□□□□ -0.95
Msh6-201ENSMUST00000005503 A0A286YCN5 57 aa9.13□□□□□ -0.95
Msh6-201ENSMUST00000005503 Krtap27-1E9PX37 202 aa9.13□□□□□ -0.95
Msh6-201ENSMUST00000005503 3110070M22RikQ9DAQ7 118 aa9.13□□□□□ -0.95
Msh6-201ENSMUST00000005503 4930524J08RikQ9CUJ5 163 aa9.13□□□□□ -0.95
Msh6-201ENSMUST00000005503 ScxQ64124 207 aa9.12□□□□□ -0.95
Msh6-201ENSMUST00000005503 Ppp1r32Q148A4 427 aa9.11□□□□□ -0.95
Msh6-201ENSMUST00000005503 Gm10577Q3UDV9 132 aa9.11□□□□□ -0.95
Msh6-201ENSMUST00000005503 Gm3443F7CCV5 94 aa9.11□□□□□ -0.95
Msh6-201ENSMUST00000005503 Tmem223Q9CQE2 199 aaKnown RBP9.1□□□□□ -0.95
Msh6-201ENSMUST00000005503 Defb42Q8BVB5 75 aa9.1□□□□□ -0.95
Msh6-201ENSMUST00000005503 Erdr1J3QMM0 206 aa9.09□□□□□ -0.95
Msh6-201ENSMUST00000005503 Ufsp1Q9CZP0 217 aa9.09□□□□□ -0.95
Msh6-201ENSMUST00000005503 Znf580Q9DB38 172 aa9.09□□□□□ -0.95
Msh6-201ENSMUST00000005503 Igkv8-18A0A0B4J1J3 123 aa9.09□□□□□ -0.95
Msh6-201ENSMUST00000005503 Gm8439G3UWA7 96 aa9.09□□□□□ -0.95
Msh6-201ENSMUST00000005503 Gm10300Q8C8P7 189 aa9.09□□□□□ -0.95
Msh6-201ENSMUST00000005503 Pla2g1bQ9Z0Y2 146 aa9.09□□□□□ -0.95
Msh6-201ENSMUST00000005503 ColqO35348 457 aa9.08□□□□□ -0.96
Msh6-201ENSMUST00000005503 Serp2Q6TAW2 65 aa9.08□□□□□ -0.96
Msh6-201ENSMUST00000005503 Prr13Q9CQJ5 137 aa9.08□□□□□ -0.96
Msh6-201ENSMUST00000005503 Igkv4-58A0A0G2JGI6 119 aa9.08□□□□□ -0.96
Msh6-201ENSMUST00000005503 Gm9887F6RFI0 207 aa9.07□□□□□ -0.96
Msh6-201ENSMUST00000005503 Ly6c2P0CW03 131 aa9.07□□□□□ -0.96
Msh6-201ENSMUST00000005503 Camk2n2Q78WH7 79 aa9.07□□□□□ -0.96
Msh6-201ENSMUST00000005503 Spink8Q09TK9 105 aa9.06□□□□□ -0.96
Msh6-201ENSMUST00000005503 Gm17577J3QNF7 156 aa9.06□□□□□ -0.96
Msh6-201ENSMUST00000005503 Ube2d4D3YUH6 135 aa9.06□□□□□ -0.96
Msh6-201ENSMUST00000005503 Ly6gP35461 111 aa9.06□□□□□ -0.96
Msh6-201ENSMUST00000005503 FshbQ60687 130 aa9.05□□□□□ -0.96
Msh6-201ENSMUST00000005503 Klk11Q9QYN3 276 aa9.05□□□□□ -0.96
Msh6-201ENSMUST00000005503 Gm9922Q8C3P1 144 aa9.05□□□□□ -0.96
Msh6-201ENSMUST00000005503 Sostdc1Q9CQN4 206 aa9.05□□□□□ -0.96
Msh6-201ENSMUST00000005503 Ankrd11E9Q4F7 2643 aa9.05□□□□□ -0.96
Msh6-201ENSMUST00000005503 Tfpi2O35536 230 aa9.05□□□□□ -0.96
Msh6-201ENSMUST00000005503 Reg3bP35230 175 aa9.04□□□□□ -0.96
Msh6-201ENSMUST00000005503 Adgrg4B7ZCC9 3073 aa9.04□□□□□ -0.96
Msh6-201ENSMUST00000005503 Igkv1-117A0A140T8M0 119 aa9.04□□□□□ -0.96
Msh6-201ENSMUST00000005503 Rpl28P41105 137 aaKnown RBP9.04□□□□□ -0.96
Msh6-201ENSMUST00000005503 Gm9805F6YK59 57 aa9.04□□□□□ -0.96
Msh6-201ENSMUST00000005503 Apoc4Q61268 124 aa9.04□□□□□ -0.96
Msh6-201ENSMUST00000005503 Gm5142Q8C5X9 133 aa9.04□□□□□ -0.96
Msh6-201ENSMUST00000005503 Trbv13-2A0A140T8N6 113 aa9.03□□□□□ -0.96
Msh6-201ENSMUST00000005503 P06329 120 aa9.03□□□□□ -0.96
Msh6-201ENSMUST00000005503 Plac8l1Q08EJ0 177 aa9.03□□□□□ -0.96
Msh6-201ENSMUST00000005503 4930546C10RikE9Q4Y3 121 aa9.03□□□□□ -0.96
Msh6-201ENSMUST00000005503 Cox7b2Q9D2H1 82 aa9.02□□□□□ -0.96
Msh6-201ENSMUST00000005503 AI854703Q8BIN3 203 aa9.02□□□□□ -0.97
Msh6-201ENSMUST00000005503 Igkv8-26A0A075B5N5 123 aa9.02□□□□□ -0.97
Msh6-201ENSMUST00000005503 Eif4ebp3Q80VV3 101 aa9.02□□□□□ -0.97
Msh6-201ENSMUST00000005503 Notch1Q01705 2531 aa9.01□□□□□ -0.97
Msh6-201ENSMUST00000005503 FlnaQ8BTM8 2647 aaKnown RBP9.01□□□□□ -0.97
Msh6-201ENSMUST00000005503 Rnf152Q8BG47 203 aa9.01□□□□□ -0.97
Msh6-201ENSMUST00000005503 Tmem258P61166 79 aa9□□□□□ -0.97
Msh6-201ENSMUST00000005503 Vpreb1P13372 142 aa9□□□□□ -0.97
Msh6-201ENSMUST00000005503 Chchd7Q8K2Q5 85 aa9□□□□□ -0.97
Msh6-201ENSMUST00000005503 Ube2bP63147 152 aa9□□□□□ -0.97
Msh6-201ENSMUST00000005503 Gm10845Q3UNY9 185 aa9□□□□□ -0.97
Msh6-201ENSMUST00000005503 Prr15lQ8JZM2 100 aa9□□□□□ -0.97
Msh6-201ENSMUST00000005503 SvipQ3UZP4 77 aa8.99□□□□□ -0.97
Msh6-201ENSMUST00000005503 FlnbQ80X90 2602 aaKnown RBP8.99□□□□□ -0.97
Msh6-201ENSMUST00000005503 Ankrd17Q99NH0 2603 aaKnown RBP8.99□□□□□ -0.97
Msh6-201ENSMUST00000005503 Cd164l2Q9D6W7 172 aa8.99□□□□□ -0.97
Msh6-201ENSMUST00000005503 Gm10549Q3URY4 149 aa8.99□□□□□ -0.97
Msh6-201ENSMUST00000005503 Fam19a1Q7TPG8 133 aa8.99□□□□□ -0.97
Msh6-201ENSMUST00000005503 DspE9Q557 2883 aaKnown RBP8.98□□□□□ -0.97
Msh6-201ENSMUST00000005503 SpegQ62407 3262 aa8.98□□□□□ -0.97
Msh6-201ENSMUST00000005503 DmdP11531 3678 aa8.98□□□□□ -0.97
Msh6-201ENSMUST00000005503 RelnQ60841 3461 aa8.97□□□□□ -0.97
Msh6-201ENSMUST00000005503 Hectd1Q69ZR2 2618 aaKnown RBP8.97□□□□□ -0.97
Msh6-201ENSMUST00000005503 Ighv1-59A0A0A6YXE0 117 aa8.97□□□□□ -0.97
Msh6-201ENSMUST00000005503 Pde6gP09174 87 aa8.97□□□□□ -0.97
Msh6-201ENSMUST00000005503 Mrpl52Q9D0Y8 121 aa8.96□□□□□ -0.98
Msh6-201ENSMUST00000005503 NipblQ6KCD5 2798 aaKnown RBP8.96□□□□□ -0.98
Msh6-201ENSMUST00000005503 SbsponQ3UPR9 264 aa8.95□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 113.5 ms