RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Akap13E9Q394 2776 aa9.4□□□□□ -0.9
Pdlim5-208ENSMUST00000196220 Cox11Q6P8I6 275 aa9.4□□□□□ -0.9
Pdlim5-208ENSMUST00000196220 Morn5Q9DAI9 170 aa9.4□□□□□ -0.9
Pdlim5-208ENSMUST00000196220 Pla2g1bQ9Z0Y2 146 aa9.4□□□□□ -0.9
Pdlim5-208ENSMUST00000196220 Gata3P23772 443 aa9.39□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 CirbpP60824 172 aaKnown RBP9.39□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Cops9Q3U898 57 aa9.39□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Ighv1-49A0A0A6YWX2 117 aa9.39□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Ighv1-62-1A0A075B5U3 116 aa9.38□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Igkv4-61A0A0G2JH00 117 aa9.38□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 CckP09240 115 aa9.38□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Spink13Q3UTS8 97 aa9.38□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Try10Q792Z1 246 aaKnown RBP9.38□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Il1f10Q8R459 152 aa9.38□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 1700010B08RikQ9DAI7 102 aa9.38□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Igfn1Q3KNY0 2849 aa9.37□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Ighv1-59A0A0A6YXE0 117 aa9.37□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Rpl32-psP17932 135 aa9.37□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 BC048562Q80ZQ7 204 aa9.37□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 MobpQ9D2P8 170 aa9.37□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Gm10542F6XDR3 90 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Fam240bJ3QMB3 78 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 P01823 113 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Spink1P09036 80 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Rpl13aP19253 203 aaKnown RBP9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Cox7a1P56392 80 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Fgf23Q9EPC2 251 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 HilpdaQ9JLS0 64 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Gm26920S4R2A5 56 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 P01745 121 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Defa3P28310 93 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Defa10P50708 93 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Defa15P50713 93 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Hint1P70349 126 aaKnown RBP9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 NrepQ07475 68 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Rmi2Q3UPE3 149 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Znf740Q6NZQ6 180 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Ss18l2Q9D174 77 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Klk11Q9QYN3 276 aa9.36□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 NpwA0A1L1STR8 176 aa9.35□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Foxc1Q61572 553 aa9.35□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Gm20730A0A075B5J6 119 aa9.34□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Trav13d-1A0A075B606 110 aa9.34□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Gm3250E9Q1M3 230 aa9.34□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 4930432M17RikQ3V0W9 174 aa9.34□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Atp6v0e2Q91XE7 81 aa9.34□□□□□ -0.91
Pdlim5-208ENSMUST00000196220 Zfp951A0A087WRH0 451 aa9.34□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Glrp1E9Q9S8 174 aa9.34□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Esm1Q9QYY7 184 aa9.33□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Helz2E9QAM5 2947 aaKnown RBP9.32□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Igkv4-54A0A0G2JES9 117 aa9.32□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Gm9513B3GLJ6 99 aa9.32□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Odf3l2Q3TZ65 277 aa9.32□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Gm10577Q3UDV9 132 aa9.32□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Tmem223Q9CQE2 199 aaKnown RBP9.32□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Rab37Q9JKM7 223 aa9.32□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Tcf24V9GWT9 166 aa9.32□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Ociad2Q9D8W7 154 aa9.31□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Zfand2aQ9JII7 171 aa9.31□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Vmo1Q5SXG7 201 aa9.29□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Sprr1bQ62267 153 aa9.29□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Tm2d2Q8R0I4 213 aa9.29□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Fbn1Q61554 2873 aaKnown RBP9.29□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 D730001G18RikA0A087WQU7 115 aa9.28□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Igkv4-53A0A0G2JFC6 119 aa9.28□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Gm7257D3YX25 99 aa9.28□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Gm11444F6QMA6 170 aa9.28□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Dad1P61804 113 aa9.28□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Tenm4Q3UHK6 2771 aa9.28□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Sh2d1aO88890 126 aa9.28□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Atp5g3P56384 141 aa9.28□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Atp5g1Q9CR84 136 aa9.28□□□□□ -0.92
Pdlim5-208ENSMUST00000196220 Gm3233E9Q2H5 230 aa9.27□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 PrcdQ00LT2 53 aa9.27□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Gm904Q3V2L5 102 aa9.27□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 4930415O20RikQ8CDT5 131 aa9.27□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Leap2Q91V13 76 aa9.26□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Tomm7Q9D173 55 aa9.26□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Itpr2Q9Z329 2701 aa9.25□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Lage3Q9CR70 148 aa9.25□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Trav11A0A0B4J1J9 114 aa9.25□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Trav13n-1A0A0G2JEU8 110 aa9.25□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 E130114P18RikF6S0S7 154 aa9.25□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 RetnQ99P87 114 aa9.24□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Cox6cQ9CPQ1 76 aa9.24□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Spry2Q9QXV8 315 aa9.24□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Trav13-4-dv7A0A075B6C2 110 aa9.23□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Defb50Q6TU36 73 aa9.23□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Dand5Q76LW6 185 aa9.23□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Mzt1Q8BUR9 78 aa9.23□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 LbhQ9CX60 105 aa9.23□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Hrct1Q9D6B9 109 aa9.23□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Ighv2-9-1A0A075B697 116 aa9.22□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Trbv13-2A0A140T8N6 113 aa9.22□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Wdr38Q9D994 303 aa9.22□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Nbeal2Q6ZQA0 2742 aa9.22□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 1700011M02RikB1AX35 88 aa9.22□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Gm10549Q3URY4 149 aa9.22□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Sostdc1Q9CQN4 206 aa9.22□□□□□ -0.93
Pdlim5-208ENSMUST00000196220 Trav7-6A0A075B640 112 aa9.21□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 170.7 ms