RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Gm10577Q3UDV9 132 aa10.19□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 1520401A03RikA0A0J9YVH6 598 aa10.19□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Prp2P05143 317 aa10.19□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 A830031A19RikQ8BNT5 113 aa10.19□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Esm1Q9QYY7 184 aa10.19□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Abca2P41234 2434 aa10.19□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Ighv1-63A0A075B5X2 117 aa10.19□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Vpreb1P13372 142 aa10.19□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 4930564D02RikQ9D4S4 103 aa10.19□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 BikO70337 150 aa10.18□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 P01729 129 aa10.18□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 CenpwQ3URR0 86 aa10.18□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Rpl18aP62717 176 aaKnown RBP10.18□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Gm5464Q3UY29 175 aa10.17□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 C1qcQ02105 246 aa10.17□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Gm10518F6UQQ9 182 aa10.17□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 PrlhG3UWC3 86 aa10.17□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Gm10542F6XDR3 90 aa10.16□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Dph3Q8K0W9 82 aa10.16□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Q9DAB9 146 aa10.16□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Igkv1-35A0A0G2JDE5 120 aa10.16□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 A930009A15RikG3UYI6 118 aa10.15□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Znf580Q9DB38 172 aa10.15□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Gm19935A0A1B0GSF9 52 aa10.15□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Gm9922Q8C3P1 144 aa10.15□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Ube2d4D3YUH6 135 aa10.15□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 UtrnE9Q6R7 3430 aa10.14□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Klk5Q9D140 293 aa10.14□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Dscaml1Q4VA61 2053 aa10.14□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Gm17472A0A075B683 117 aa10.14□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Ly6hQ9WUC3 139 aa10.14□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Trav13d-4A0A0G2JFX3 110 aa10.14□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Crip3Q6Q6R3 243 aa10.14□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Rpl39lQ9CQD0 51 aa10.14□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 CrygfQ9CXV3 174 aa10.13□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Nav3Q80TN7 2359 aa10.13□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Reg3bP35230 175 aa10.12□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Igkv2-109A0A075B5K6 120 aa10.12□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Gm10251J3QPM5 127 aa10.12□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Defb42Q8BVB5 75 aa10.12□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Trav13n-2A0A0G2JF93 110 aa10.11□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Gm3443F7CCV5 94 aa10.11□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Cox7b2Q9D2H1 82 aa10.11□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 C2cd3Q52KB6 2323 aa10.11□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Igkv4-58A0A0G2JGI6 119 aa10.11□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Srsf12Q8C8K3 266 aa10.11□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Prrc2aQ7TSC1 2158 aaKnown RBP10.11□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Gm16223Q8CBM3 117 aa10.11□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Ighv1-62-1A0A075B5U3 116 aa10.1□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Ighv1-59A0A0A6YXE0 117 aa10.1□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Hivep2Q3UHF7 2430 aa10.1□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Prh1P05142 261 aa10.1□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Trav13-4-dv7A0A075B6C2 110 aa10.1□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Gm10490F6VBM2 120 aa10.1□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Dnah12Q3V0Q1 3086 aa10.09□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 SrarpQ3ULG3 163 aa10.09□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 CenpfE9Q3P4 2997 aaKnown RBP10.09□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Gm10647E9Q8X0 124 aa10.09□□□□□ -0.79
Pcdha1-202ENSMUST00000193839 Ighv10-1A0A0B4J1J6 119 aa10.08□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Klk12B2RVZ0 247 aa10.08□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Trav13-1A0A075B644 110 aa10.08□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Trav13-2A0A075B649 110 aa10.08□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Igkv1-122A0A140T8M9 119 aa10.08□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Gm10337F7DEP7 55 aa10.08□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Camk2n2Q78WH7 79 aa10.08□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 5730596B20RikQ8BQ08 205 aa10.08□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 P01823 113 aa10.07□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Gm4707V9GXN5 68 aa10.07□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Sh2d1aO88890 126 aa10.07□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Gm10509O88255 85 aa10.06□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Cep350E9Q309 3095 aa10.06□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 B230359F08RikA0A0B4J1K3 109 aa10.06□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Igkv8-26A0A075B5N5 123 aa10.05□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Trav9n-4A0A075B631 113 aa10.05□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Igkv8-18A0A0B4J1J3 123 aa10.05□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Gm2916Q9D9B9 127 aa10.04□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 EnhoQ8K1D8 76 aa10.04□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Cdip1Q9DB75 208 aa10.04□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Krtap27-1E9PX37 202 aa10.04□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 CrygdP04342 174 aa10.04□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Gm3618D3Z4P5 127 aa10.04□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Klk9Q32M27 251 aa10.03□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Gm37389A0A0A6YW05 95 aa10.03□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Bri3P28662 125 aa10.03□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Lama2Q60675 3118 aaKnown RBP10.03□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Tcl1b5P56845 121 aa10.03□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Bahcc1Q3UHR0 2643 aa10.02□□□□□ -0.8
Pcdha1-202ENSMUST00000193839 Gm10735Q3US96 136 aa10.02□□□□□ -0.81
Pcdha1-202ENSMUST00000193839 Gm17577J3QNF7 156 aa10.02□□□□□ -0.81
Pcdha1-202ENSMUST00000193839 CrygeQ03740 174 aa10.02□□□□□ -0.81
Pcdha1-202ENSMUST00000193839 Rpl28P41105 137 aaKnown RBP10.02□□□□□ -0.81
Pcdha1-202ENSMUST00000193839 Ube2bP63147 152 aa10.02□□□□□ -0.81
Pcdha1-202ENSMUST00000193839 Spink13Q3UTS8 97 aa10.02□□□□□ -0.81
Pcdha1-202ENSMUST00000193839 Abca12E9Q876 2595 aa10.01□□□□□ -0.81
Pcdha1-202ENSMUST00000193839 Tfpi2O35536 230 aa10.01□□□□□ -0.81
Pcdha1-202ENSMUST00000193839 Cd164l2Q9D6W7 172 aa10.01□□□□□ -0.81
Pcdha1-202ENSMUST00000193839 TroQ6DIC6 2087 aa10.01□□□□□ -0.81
Pcdha1-202ENSMUST00000193839 Notch2O35516 2470 aa10□□□□□ -0.81
Pcdha1-202ENSMUST00000193839 Naa38Q9D2U5 125 aa10□□□□□ -0.81
Pcdha1-202ENSMUST00000193839 BC025920Q3US60 128 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 69 ms