RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Smim20D3Z7Q2 69 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Pde6gP09174 87 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 9530003J23RikQ8BM26 151 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Ighv1-82A0A0G2JEU7 117 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 ColqO35348 457 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 CrygcQ61597 174 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Psmb11Q8BG41 302 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Ufsp1Q9CZP0 217 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Spry2Q9QXV8 315 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Tcte2E9PY37 120 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Fam19a1Q7TPG8 133 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 FcorP0DJI6 106 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Vpreb2P13373 142 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Gm10401E9Q3K6 71 aa5.06□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Ighv2-3A0A075B696 115 aa5.05□□□□□ -1.6
Scn8a-205ENSMUST00000108910 U90926O08546 118 aa5.05□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Ly6c2P0CW03 131 aa5.05□□□□□ -1.6
Scn8a-205ENSMUST00000108910 P18527 97 aa5.05□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Gm5629P06327 117 aa5.05□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Alms1Q8K4E0 3251 aa5.05□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Ighv1-63A0A075B5X2 117 aa5.05□□□□□ -1.6
Scn8a-205ENSMUST00000108910 E130116L18RikQ8BMV6 101 aa5.04□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Q9DAQ5 155 aa5.04□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Igkv4-92A0A0B4J1I2 117 aa5.04□□□□□ -1.6
Scn8a-205ENSMUST00000108910 P01729 129 aa5.04□□□□□ -1.6
Scn8a-205ENSMUST00000108910 2010109I03RikQ9CQ11 111 aa5.04□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Esm1Q9QYY7 184 aa5.04□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Pla2g2dQ9WVF6 144 aa5.04□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Igkv3-3A0A140T8Q0 119 aa5.04□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Prr15lQ8JZM2 100 aa5.04□□□□□ -1.6
Scn8a-205ENSMUST00000108910 SptssbQ925E8 76 aa5.04□□□□□ -1.6
Scn8a-205ENSMUST00000108910 P01659 112 aa5.04□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Wisp2Q9Z0G4 251 aa5.03□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Q9D8Q6 235 aa5.03□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Lce6aD3YV94 81 aa5.03□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Gm10647E9Q8X0 124 aa5.03□□□□□ -1.6
Scn8a-205ENSMUST00000108910 Col6a5A6H584 2640 aa5.02□□□□□ -1.61
Scn8a-205ENSMUST00000108910 1520401A03RikA0A0J9YVH6 598 aa5.02□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Gm9925F6T2U3 160 aa5.02□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Plac8l1Q08EJ0 177 aa5.02□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Rnf185Q91YT2 192 aa5.02□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ly6hQ9WUC3 139 aa5.02□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Edn2P22389 175 aa5.02□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Klk9Q32M27 251 aa5.02□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Znf239P24399 201 aa5.02□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ly6gP35461 111 aa5.02□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Tmem213Q08EA8 116 aa5.02□□□□□ -1.61
Scn8a-205ENSMUST00000108910 TshbP12656 138 aa5.02□□□□□ -1.61
Scn8a-205ENSMUST00000108910 E130114P18RikF6S0S7 154 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Cfc1P97766 202 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 C1qcQ02105 246 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Igkv1-117A0A140T8M0 119 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Gm10226O88253 85 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Rnf152Q8BG47 203 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ndufc1Q9CQY9 76 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 PscaP57096 123 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Gm12689Q8BQU9 117 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 EnhoQ8K1D8 76 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Pcsk5Q04592 1877 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Wipf1Q8K1I7 493 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Fgf23Q9EPC2 251 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Defb13Q8R2I4 64 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Dkk4Q8VEJ3 221 aa5.01□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Igkv8-21A0A140T8P7 120 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 A130051J06RikQ8CAU1 227 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Pkd1l1Q8R526 2615 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Gm9805F6YK59 57 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Cox7bP56393 80 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Fam19a5Q91WE9 132 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Nsd1O88491 2588 aaKnown RBP5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ighv1-5A0A0A6YWG2 117 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ighv8-5A0A0A6YY60 119 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 9430015G10RikA2ASP7 199 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ube2d4D3YUH6 135 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ighv1-61P01749 117 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ypel4Q65Z93 127 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 A830005F24RikQ8BRT5 167 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Igkv1-110A0A0B4J1I0 119 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 PrlhG3UWC3 86 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Fgfbp3Q1HCM0 245 aa5□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Sec61gP60060 68 aa4.99□□□□□ -1.61
Scn8a-205ENSMUST00000108910 FshbQ60687 130 aa4.99□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Tcl1b3P56842 122 aa4.99□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ighv1-62-1A0A075B5U3 116 aa4.99□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ighv2-6-8A0A0A6YWY9 116 aa4.99□□□□□ -1.61
Scn8a-205ENSMUST00000108910 P01823 113 aa4.99□□□□□ -1.61
Scn8a-205ENSMUST00000108910 4930535I16RikQ9CUI2 172 aa4.99□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ighv10-1A0A0B4J1J6 119 aa4.99□□□□□ -1.61
Scn8a-205ENSMUST00000108910 FlnaQ8BTM8 2647 aaKnown RBP4.98□□□□□ -1.61
Scn8a-205ENSMUST00000108910 P06320 134 aa4.98□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ccdc179J3QM76 67 aa4.98□□□□□ -1.61
Scn8a-205ENSMUST00000108910 CtrlQ9ER05 264 aa4.98□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ighv1-59A0A0A6YXE0 117 aa4.98□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ighv1-72P01751 139 aa4.98□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Timm17bQ9Z0V7 172 aa4.98□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Gm1968Q3T9I3 115 aa4.98□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Wfdc15aQ8BH89 80 aa4.98□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Wdr38Q9D994 303 aa4.98□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ighv10-3A0A075B5T6 119 aa4.98□□□□□ -1.61
Scn8a-205ENSMUST00000108910 Ighv1-66A0A075B5X5 117 aa4.98□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 123.7 ms