RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Rhox8Q6VSS7 320 aa11.92□□□□□ -0.5
Scn8a-205ENSMUST00000108910 Rpgrip1Q9EPQ2 1331 aa10.89□□□□□ -0.67
Scn8a-205ENSMUST00000108910 Ehmt2Q9Z148 1263 aaKnown RBP10.81□□□□□ -0.68
Scn8a-205ENSMUST00000108910 Ccdc136Q3TVA9 1136 aa10.54□□□□□ -0.72
Scn8a-205ENSMUST00000108910 Cngb1E1AZ71 1325 aa10.54□□□□□ -0.72
Scn8a-205ENSMUST00000108910 Wdr66E9Q743 1299 aa10.53□□□□□ -0.72
Scn8a-205ENSMUST00000108910 Las1lA2BE28 776 aaKnown RBP10.52□□□□□ -0.73
Scn8a-205ENSMUST00000108910 Esf1Q3V1V3 845 aaKnown RBP10.48□□□□□ -0.73
Scn8a-205ENSMUST00000108910 Ube2uB1AUC4 352 aa10.42□□□□□ -0.74
Scn8a-205ENSMUST00000108910 Zeb1Q64318 1117 aa10.41□□□□□ -0.74
Scn8a-205ENSMUST00000108910 Gab3Q8BSM5 595 aa10.39□□□□□ -0.75
Scn8a-205ENSMUST00000108910 Pelp1Q9DBD5 1123 aaKnown RBP10.34□□□□□ -0.75
Scn8a-205ENSMUST00000108910 Npm2Q80W85 207 aa10.3□□□□□ -0.76
Scn8a-205ENSMUST00000108910 Trim41Q5NCC3 630 aa10.27□□□□□ -0.76
Scn8a-205ENSMUST00000108910 Myt1lP97500 1187 aa10.23□□□□□ -0.77
Scn8a-205ENSMUST00000108910 NischQ80TM9 1593 aa10.19□□□□□ -0.78
Scn8a-205ENSMUST00000108910 Acin1Q9JIX8 1338 aaKnown RBP10.07□□□□□ -0.8
Scn8a-205ENSMUST00000108910 CenpbP27790 599 aa10.04□□□□□ -0.8
Scn8a-205ENSMUST00000108910 UbtfP25976 765 aaKnown RBP10.03□□□□□ -0.8
Scn8a-205ENSMUST00000108910 NefmP08553 848 aa10.01□□□□□ -0.81
Scn8a-205ENSMUST00000108910 Amer1Q7TS75 1132 aa9.99□□□□□ -0.81
Scn8a-205ENSMUST00000108910 Slc24a1Q91WD8 1130 aa9.97□□□□□ -0.81
Scn8a-205ENSMUST00000108910 Stra8P70278 393 aa9.95□□□□□ -0.82
Scn8a-205ENSMUST00000108910 Ccdc180J3QNE4 1664 aa9.87□□□□□ -0.83
Scn8a-205ENSMUST00000108910 Il27Q8K3I6 234 aa9.82□□□□□ -0.84
Scn8a-205ENSMUST00000108910 Cdk11bP24788 784 aaKnown RBP9.78□□□□□ -0.84
Scn8a-205ENSMUST00000108910 HrcG5E8J6 738 aa9.76□□□□□ -0.85
Scn8a-205ENSMUST00000108910 Rtl1Q7M732 1744 aa9.75□□□□□ -0.85
Scn8a-205ENSMUST00000108910 Ttbk1Q6PCN3 1308 aa9.74□□□□□ -0.85
Scn8a-205ENSMUST00000108910 Fam50aQ9WV03 339 aaKnown RBP9.73□□□□□ -0.85
Scn8a-205ENSMUST00000108910 Ap3b1Q9Z1T1 1105 aa9.72□□□□□ -0.85
Scn8a-205ENSMUST00000108910 NrdcQ8BHG1 1161 aa9.71□□□□□ -0.86
Scn8a-205ENSMUST00000108910 Neurod1Q60867 357 aa9.71□□□□□ -0.86
Scn8a-205ENSMUST00000108910 Pcgf6Q99NA9 353 aa9.7□□□□□ -0.86
Scn8a-205ENSMUST00000108910 NclP09405 707 aaKnown RBP9.68□□□□□ -0.86
Scn8a-205ENSMUST00000108910 Anp32bQ9EST5 272 aaKnown RBP9.67□□□□□ -0.86
Scn8a-205ENSMUST00000108910 Zcchc6Q5BLK4 1491 aaKnown RBP9.67□□□□□ -0.86
Scn8a-205ENSMUST00000108910 Nop58Q6DFW4 536 aaKnown RBP9.66□□□□□ -0.86
Scn8a-205ENSMUST00000108910 Ppargc1bQ8VHJ7 1014 aa9.65□□□□□ -0.86
Scn8a-205ENSMUST00000108910 Tnnt3Q9QZ47 272 aa9.65□□□□□ -0.86
Scn8a-205ENSMUST00000108910 Eif5bQ05D44 1216 aaKnown RBP9.65□□□□□ -0.87
Scn8a-205ENSMUST00000108910 NeflP08551 543 aa9.64□□□□□ -0.87
Scn8a-205ENSMUST00000108910 4933416C03RikQ3V063 378 aa9.64□□□□□ -0.87
Scn8a-205ENSMUST00000108910 Os9Q8K2C7 672 aa9.62□□□□□ -0.87
Scn8a-205ENSMUST00000108910 4930567H17RikQ3V0K5 233 aa9.59□□□□□ -0.87
Scn8a-205ENSMUST00000108910 TonslQ6NZL6 1363 aa9.57□□□□□ -0.88
Scn8a-205ENSMUST00000108910 Supt5hO55201 1082 aaKnown RBP9.56□□□□□ -0.88
Scn8a-205ENSMUST00000108910 Abcc9P70170 1546 aa9.55□□□□□ -0.88
Scn8a-205ENSMUST00000108910 Myt1Q8CFC2 1127 aa9.54□□□□□ -0.88
Scn8a-205ENSMUST00000108910 Gm35339A0A140LHH9 1649 aa9.52□□□□□ -0.89
Scn8a-205ENSMUST00000108910 Mier1Q5UAK0 511 aa9.48□□□□□ -0.89
Scn8a-205ENSMUST00000108910 Zbtb7cQ8VCZ7 619 aa9.43□□□□□ -0.9
Scn8a-205ENSMUST00000108910 Lmod2Q3UHZ5 550 aa9.41□□□□□ -0.9
Scn8a-205ENSMUST00000108910 Plekhg3Q4VAC9 1341 aa9.39□□□□□ -0.91
Scn8a-205ENSMUST00000108910 Rtl5Q5DTT4 599 aa9.37□□□□□ -0.91
Scn8a-205ENSMUST00000108910 Hnrnpul2Q00PI9 745 aaKnown RBP9.37□□□□□ -0.91
Scn8a-205ENSMUST00000108910 ClspnQ80YR7 1315 aa9.36□□□□□ -0.91
Scn8a-205ENSMUST00000108910 Npm1Q61937 292 aaKnown RBP9.34□□□□□ -0.91
Scn8a-205ENSMUST00000108910 Zbtb4Q5F293 982 aa9.33□□□□□ -0.92
Scn8a-205ENSMUST00000108910 Gm13697A2AK42 830 aa9.32□□□□□ -0.92
Scn8a-205ENSMUST00000108910 Chic1Q8CBW7 227 aa9.31□□□□□ -0.92
Scn8a-205ENSMUST00000108910 Anp32aO35381 247 aa9.3□□□□□ -0.92
Scn8a-205ENSMUST00000108910 Mapk8ip2Q9ERE9 830 aa9.29□□□□□ -0.92
Scn8a-205ENSMUST00000108910 Erich6D3Z6S9 713 aa9.29□□□□□ -0.92
Scn8a-205ENSMUST00000108910 Ifnlr1Q8CGK5 535 aa9.28□□□□□ -0.92
Scn8a-205ENSMUST00000108910 Nlrp6Q91WS2 869 aa9.28□□□□□ -0.92
Scn8a-205ENSMUST00000108910 DaxxO35613 739 aa9.27□□□□□ -0.93
Scn8a-205ENSMUST00000108910 Prdm10Q3UTQ7 1184 aa9.25□□□□□ -0.93
Scn8a-205ENSMUST00000108910 Eid3Q3V124 375 aa9.25□□□□□ -0.93
Scn8a-205ENSMUST00000108910 Atp1b4Q99ME6 356 aa9.24□□□□□ -0.93
Scn8a-205ENSMUST00000108910 Polr3glQ8R0C0 218 aa9.23□□□□□ -0.93
Scn8a-205ENSMUST00000108910 Gm38655A0A286YDK6 273 aa9.22□□□□□ -0.93
Scn8a-205ENSMUST00000108910 ArxO35085 564 aa9.19□□□□□ -0.94
Scn8a-205ENSMUST00000108910 Clip1Q922J3 1391 aa9.19□□□□□ -0.94
Scn8a-205ENSMUST00000108910 Abcc8B2RUS7 1588 aa9.17□□□□□ -0.94
Scn8a-205ENSMUST00000108910 Gm13695A2AK44 830 aa9.16□□□□□ -0.94
Scn8a-205ENSMUST00000108910 Brd4Q9ESU6 1400 aaKnown RBP9.16□□□□□ -0.94
Scn8a-205ENSMUST00000108910 Sall2Q9QX96 1004 aa9.16□□□□□ -0.94
Scn8a-205ENSMUST00000108910 Fkbp15Q6P9Q6 1216 aaKnown RBP9.16□□□□□ -0.94
Scn8a-205ENSMUST00000108910 Csrnp3P59055 597 aa9.15□□□□□ -0.95
Scn8a-205ENSMUST00000108910 DiexfQ8BTT6 772 aaKnown RBP9.14□□□□□ -0.95
Scn8a-205ENSMUST00000108910 Cep164Q5DU05 1446 aa9.13□□□□□ -0.95
Scn8a-205ENSMUST00000108910 Hdac5Q9Z2V6 1113 aa9.12□□□□□ -0.95
Scn8a-205ENSMUST00000108910 Dcaf1Q80TR8 1506 aa9.11□□□□□ -0.95
Scn8a-205ENSMUST00000108910 Anks4bQ8K3X6 423 aa9.1□□□□□ -0.95
Scn8a-205ENSMUST00000108910 Plppr3Q7TPB0 716 aa9.09□□□□□ -0.95
Scn8a-205ENSMUST00000108910 Ccer2J3QPU5 274 aa9.08□□□□□ -0.96
Scn8a-205ENSMUST00000108910 Calr4Q3TQS0 420 aa9.07□□□□□ -0.96
Scn8a-205ENSMUST00000108910 Rangap1P46061 589 aaKnown RBP9.07□□□□□ -0.96
Scn8a-205ENSMUST00000108910 Ppp4r2Q0VGB7 417 aa9.06□□□□□ -0.96
Scn8a-205ENSMUST00000108910 Rad21Q61550 635 aaKnown RBP9.06□□□□□ -0.96
Scn8a-205ENSMUST00000108910 Chic2Q9D9G3 165 aa9.06□□□□□ -0.96
Scn8a-205ENSMUST00000108910 Aplp2Q06335 707 aa9.03□□□□□ -0.96
Scn8a-205ENSMUST00000108910 Rb1cc1Q9ESK9 1588 aa9.02□□□□□ -0.96
Scn8a-205ENSMUST00000108910 Upf2A2AT37 1269 aaKnown RBP9.02□□□□□ -0.97
Scn8a-205ENSMUST00000108910 Mrs2Q5NCE8 434 aa9.02□□□□□ -0.97
Scn8a-205ENSMUST00000108910 BlmO88700 1416 aa8.99□□□□□ -0.97
Scn8a-205ENSMUST00000108910 Wdr43Q6ZQL4 677 aaKnown RBP8.99□□□□□ -0.97
Scn8a-205ENSMUST00000108910 Ubl4bQ9CQ84 188 aa8.97□□□□□ -0.97
Scn8a-205ENSMUST00000108910 CatipB9EKE5 520 aa8.95□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 109.1 ms