RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Nbl1Q61477 178 aa6.94□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Synj2bpQ9D6K5 145 aa6.94□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Ighv1-63A0A075B5X2 117 aa6.94□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Rpl36aP83882 106 aaKnown RBP6.94□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 4933415A04RikQ9D443 101 aa6.94□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Igkv4-57A0A0A6YYE7 117 aa6.93□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Igkv4-62A0A0G2JDW9 117 aa6.93□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Gm10845Q3UNY9 185 aa6.93□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Ighv2-5A0A0A6YY69 116 aa6.93□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Cdc42se1Q8BHL7 80 aa6.93□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Ufsp1Q9CZP0 217 aa6.93□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Rnf152Q8BG47 203 aa6.92□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 KalrnA2CG49 2964 aa6.92□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Gm10647E9Q8X0 124 aa6.92□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Frem1Q684R7 2191 aa6.92□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Igkv4-91A0A075B5L2 119 aa6.91□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 AI606181Q8C7B9 129 aa6.91□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Gm9903Q8C9Y8 129 aa6.91□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 MplkipQ9D011 178 aa6.91□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Tln2Q71LX4 2375 aa6.91□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Igkv4-69A0A0B4J1I6 116 aa6.91□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Ndufs7Q9DC70 224 aa6.91□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Dad1P61804 113 aa6.91□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Piezo2Q8CD54 2822 aa6.91□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Vps13cQ8BX70 3748 aa6.9□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Igkv4-78A0A0A6YYE5 119 aa6.9□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Trav9d-4A0A0G2JG37 103 aa6.9□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Gm17727E9Q4V7 109 aa6.9□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Fgfbp3Q1HCM0 245 aa6.9□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Atp6v0e1Q9CQD8 81 aa6.9□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Dopey2Q3UHQ6 2295 aa6.9□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Igkv4-53A0A0G2JFC6 119 aa6.9□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Trbv13-2A0A140T8N6 113 aa6.9□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 PspnO70300 156 aa6.9□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 2310034G01RikA0A286YDL3 209 aa6.89□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 P06320 134 aa6.89□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Defb26Q30KN7 186 aa6.89□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 9230102O04RikA2ASX7 82 aa6.89□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 1700042G07RikB1AUF7 90 aa6.89□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 C530025M09RikF6RGA8 229 aa6.89□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Cox17P56394 63 aa6.89□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Odf3l2Q3TZ65 277 aa6.89□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Ighv10-1A0A0B4J1J6 119 aa6.88□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Pla2g2dQ9WVF6 144 aa6.88□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Ighv2-9A0A075B5Q5 116 aa6.88□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 A930009A15RikG3UYI6 118 aa6.88□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Gm10542F6XDR3 90 aa6.87□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Rpl39lQ9CQD0 51 aa6.87□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Igkv8-27A0A0G2JF28 120 aa6.87□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Igkv8-30A0A140T8M3 121 aa6.87□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 GfyJ3KML8 504 aa6.87□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 A830005F24RikQ8BRT5 167 aa6.87□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 9130230L23RikQ8CC80 163 aa6.87□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Trav9-4A0A0B4J1K2 113 aa6.86□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 1700084M14RikB1AT01 78 aa6.86□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Gm10509O88255 85 aa6.86□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Gm5142Q8C5X9 133 aa6.86□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Krtap26-1Q9D7N2 215 aa6.86□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Gm7173A0A0G2JEB6 3132 aa6.86□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Igkv1-99F6XWB2 120 aa6.86□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Gm10643Q3URG9 111 aa6.86□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Gm10197F6QEY5 67 aa6.85□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Q8BT88 171 aa6.85□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Zfhx3Q61329 3726 aa6.85□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Ighv2-2A0A075B5P8 116 aa6.85□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 P01821 116 aa6.85□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Dido1Q8C9B9 2256 aaKnown RBP6.84□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 MgaA2AWL7 3003 aaKnown RBP6.84□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Igkv4-79A0A075B5L8 119 aa6.84□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Igkv8-26A0A075B5N5 123 aa6.84□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Trav13n-2A0A0G2JF93 110 aa6.84□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Gm17689B3GLJ4 109 aa6.84□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Lynx1P0DP60 116 aa6.84□□□□□ -1.31
Hmgb1-201ENSMUST00000085546 Gm20604F8WIA3 75 aa6.83□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Tfpi2O35536 230 aa6.83□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Spag11Q8K4N2 71 aa6.83□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Fam104aA2A6P4 185 aa6.83□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Trav9d-3A0A075B695 113 aa6.82□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Gm16181B0V2H2 73 aa6.82□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Igkv2-109A0A075B5K6 120 aa6.82□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Gm10490F6VBM2 120 aa6.82□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Ccl5P30882 91 aa6.82□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Ly6dP35459 127 aa6.82□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Trav9n-4A0A075B631 113 aa6.82□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Defb50Q6TU36 73 aa6.82□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Col12a1Q60847 3120 aa6.81□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Sptbn2Q68FG2 2388 aa6.81□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Cep295Q8BQ48 2412 aa6.81□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Gm26620Q9CY65 116 aa6.81□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Gm9913Q8BQQ2 135 aa6.81□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 TectaO08523 2155 aa6.8□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Pde6gP09174 87 aa6.8□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 OxtP35454 125 aa6.8□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Defb30Q30KN4 75 aa6.8□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Defb36Q8K3U4 67 aa6.8□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Spint3Q3UW09 88 aa6.79□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Prrc2cQ3TLH4 2846 aaKnown RBP6.78□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Gm37988J3QM41 62 aa6.78□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Cdc42se2Q8BGH7 84 aa6.78□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Zfand2aQ9JII7 171 aa6.78□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms