RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Trank1Q8BV79 2999 aa9.69□□□□□ -0.86
Vps35-201ENSMUST00000034131 Sorl1O88307 2215 aaKnown RBP9.69□□□□□ -0.86
Vps35-201ENSMUST00000034131 Chd8Q09XV5 2582 aaKnown RBP9.69□□□□□ -0.86
Vps35-201ENSMUST00000034131 Ighv1-62-1A0A075B5U3 116 aa9.69□□□□□ -0.86
Vps35-201ENSMUST00000034131 Gm10509O88255 85 aa9.69□□□□□ -0.86
Vps35-201ENSMUST00000034131 Klk1b4P00757 256 aa9.69□□□□□ -0.86
Vps35-201ENSMUST00000034131 Pfn2Q9JJV2 140 aa9.69□□□□□ -0.86
Vps35-201ENSMUST00000034131 9430015G10RikA2ASP7 199 aa9.69□□□□□ -0.86
Vps35-201ENSMUST00000034131 1810032O08RikE9PZV8 113 aa9.68□□□□□ -0.86
Vps35-201ENSMUST00000034131 4930546C10RikE9Q4Y3 121 aa9.68□□□□□ -0.86
Vps35-201ENSMUST00000034131 Ang3P97802 145 aa9.68□□□□□ -0.86
Vps35-201ENSMUST00000034131 Fgfbp3Q1HCM0 245 aa9.68□□□□□ -0.86
Vps35-201ENSMUST00000034131 Brk1Q91VR8 75 aa9.68□□□□□ -0.86
Vps35-201ENSMUST00000034131 Adgrg4B7ZCC9 3073 aa9.68□□□□□ -0.86
Vps35-201ENSMUST00000034131 Trav9-2A0A075B647 113 aa9.68□□□□□ -0.86
Vps35-201ENSMUST00000034131 Trav9-4A0A0B4J1K2 113 aa9.68□□□□□ -0.86
Vps35-201ENSMUST00000034131 B230217C12RikE9Q3Z1 139 aa9.68□□□□□ -0.86
Vps35-201ENSMUST00000034131 Rpl28P41105 137 aaKnown RBP9.68□□□□□ -0.86
Vps35-201ENSMUST00000034131 Gm7849D3YX03 116 aa9.68□□□□□ -0.86
Vps35-201ENSMUST00000034131 Krtap26-1Q9D7N2 215 aa9.68□□□□□ -0.86
Vps35-201ENSMUST00000034131 Tmem254aP0DN89 123 aa9.67□□□□□ -0.86
Vps35-201ENSMUST00000034131 Tmem254bP0DN90 123 aa9.67□□□□□ -0.86
Vps35-201ENSMUST00000034131 Tmem254cP0DN91 123 aa9.67□□□□□ -0.86
Vps35-201ENSMUST00000034131 Gm10549Q3URY4 149 aa9.67□□□□□ -0.86
Vps35-201ENSMUST00000034131 Ighv2-7A0A075B5Q8 116 aa9.67□□□□□ -0.86
Vps35-201ENSMUST00000034131 Pla2g2aP31482 146 aa9.66□□□□□ -0.86
Vps35-201ENSMUST00000034131 Lmo4P61969 165 aa9.66□□□□□ -0.86
Vps35-201ENSMUST00000034131 Ntn5Q3UQ22 452 aa9.66□□□□□ -0.86
Vps35-201ENSMUST00000034131 H2al1aQ5M8Q2 105 aa9.66□□□□□ -0.86
Vps35-201ENSMUST00000034131 Vmo1Q5SXG7 201 aa9.66□□□□□ -0.86
Vps35-201ENSMUST00000034131 Wfdc15aQ8BH89 80 aa9.66□□□□□ -0.86
Vps35-201ENSMUST00000034131 Ighv5-9-1A0A0A6YVS4 126 aa9.66□□□□□ -0.86
Vps35-201ENSMUST00000034131 B230307C23RikQ8BLB2 64 aa9.65□□□□□ -0.86
Vps35-201ENSMUST00000034131 Gm9925F6T2U3 160 aa9.65□□□□□ -0.86
Vps35-201ENSMUST00000034131 Cystm1Q8K353 104 aa9.65□□□□□ -0.86
Vps35-201ENSMUST00000034131 Mrpl55Q9CZ83 127 aa9.65□□□□□ -0.86
Vps35-201ENSMUST00000034131 Dynlrb2Q9DAJ5 96 aa9.65□□□□□ -0.87
Vps35-201ENSMUST00000034131 Igkv4-79A0A075B5L8 119 aa9.64□□□□□ -0.87
Vps35-201ENSMUST00000034131 Sprr3O09116 238 aa9.64□□□□□ -0.87
Vps35-201ENSMUST00000034131 Gm10647E9Q8X0 124 aa9.63□□□□□ -0.87
Vps35-201ENSMUST00000034131 Rpl36aP83882 106 aaKnown RBP9.63□□□□□ -0.87
Vps35-201ENSMUST00000034131 Ankhd1E9PUR0 2548 aaKnown RBP9.63□□□□□ -0.87
Vps35-201ENSMUST00000034131 Q8R092 253 aa9.63□□□□□ -0.87
Vps35-201ENSMUST00000034131 Bles03Q8VD62 251 aa9.63□□□□□ -0.87
Vps35-201ENSMUST00000034131 Ighv5-8A0A075B676 92 aa9.62□□□□□ -0.87
Vps35-201ENSMUST00000034131 Igkv1-117A0A140T8M0 119 aa9.62□□□□□ -0.87
Vps35-201ENSMUST00000034131 Spink1P09036 80 aa9.62□□□□□ -0.87
Vps35-201ENSMUST00000034131 Ncor2Q9WU42 2472 aaKnown RBP9.62□□□□□ -0.87
Vps35-201ENSMUST00000034131 Trav9n-2A0A0G2JDP3 113 aa9.61□□□□□ -0.87
Vps35-201ENSMUST00000034131 Ighv13-2A0A0A6YWN3 119 aa9.61□□□□□ -0.87
Vps35-201ENSMUST00000034131 Prp2P05143 317 aa9.61□□□□□ -0.87
Vps35-201ENSMUST00000034131 P01729 129 aa9.61□□□□□ -0.87
Vps35-201ENSMUST00000034131 Tmem223Q9CQE2 199 aaKnown RBP9.61□□□□□ -0.87
Vps35-201ENSMUST00000034131 NbasE9Q411 2356 aa9.6□□□□□ -0.87
Vps35-201ENSMUST00000034131 Lama5Q61001 3718 aa9.6□□□□□ -0.87
Vps35-201ENSMUST00000034131 Ube2d4D3YUH6 135 aa9.6□□□□□ -0.87
Vps35-201ENSMUST00000034131 Vpreb1P13372 142 aa9.6□□□□□ -0.87
Vps35-201ENSMUST00000034131 Gm815Q3UWS2 115 aa9.59□□□□□ -0.87
Vps35-201ENSMUST00000034131 4930535I16RikQ9CUI2 172 aa9.59□□□□□ -0.87
Vps35-201ENSMUST00000034131 Ankrd11E9Q4F7 2643 aa9.59□□□□□ -0.87
Vps35-201ENSMUST00000034131 CrygeQ03740 174 aa9.59□□□□□ -0.87
Vps35-201ENSMUST00000034131 Svep1A2AVA0 3567 aa9.59□□□□□ -0.87
Vps35-201ENSMUST00000034131 Igkv4-68A0A0B4J1I7 117 aa9.59□□□□□ -0.87
Vps35-201ENSMUST00000034131 Krtap16-1A2A5X5 502 aa9.59□□□□□ -0.87
Vps35-201ENSMUST00000034131 Trav13-4-dv7A0A075B6C2 110 aa9.58□□□□□ -0.88
Vps35-201ENSMUST00000034131 Trav13n-2A0A0G2JF93 110 aa9.58□□□□□ -0.88
Vps35-201ENSMUST00000034131 Gm10337F7DEP7 55 aa9.58□□□□□ -0.88
Vps35-201ENSMUST00000034131 P01738 130 aa9.58□□□□□ -0.88
Vps35-201ENSMUST00000034131 Defa20Q45VN2 95 aa9.58□□□□□ -0.88
Vps35-201ENSMUST00000034131 Tm2d2Q8R0I4 213 aa9.58□□□□□ -0.88
Vps35-201ENSMUST00000034131 Muc4Q8JZM8 3443 aa9.58□□□□□ -0.88
Vps35-201ENSMUST00000034131 EnhoQ8K1D8 76 aa9.58□□□□□ -0.88
Vps35-201ENSMUST00000034131 Gm10226O88253 85 aa9.57□□□□□ -0.88
Vps35-201ENSMUST00000034131 Cmya5Q70KF4 3739 aa9.57□□□□□ -0.88
Vps35-201ENSMUST00000034131 Bri3P28662 125 aa9.56□□□□□ -0.88
Vps35-201ENSMUST00000034131 Ighv1-56A0A0A6YXG2 117 aa9.56□□□□□ -0.88
Vps35-201ENSMUST00000034131 Fam19a1Q7TPG8 133 aa9.56□□□□□ -0.88
Vps35-201ENSMUST00000034131 Ep300B2RWS6 2412 aa9.56□□□□□ -0.88
Vps35-201ENSMUST00000034131 Ifitm6A0A1B0GS75 124 aa9.55□□□□□ -0.88
Vps35-201ENSMUST00000034131 Cdc42se2Q8BGH7 84 aa9.55□□□□□ -0.88
Vps35-201ENSMUST00000034131 GfyJ3KML8 504 aa9.55□□□□□ -0.88
Vps35-201ENSMUST00000034131 Reg3gO09049 174 aa9.55□□□□□ -0.88
Vps35-201ENSMUST00000034131 B230359F08RikA0A0B4J1K3 109 aa9.55□□□□□ -0.88
Vps35-201ENSMUST00000034131 1810062G17RikG3X8Y2 129 aa9.55□□□□□ -0.88
Vps35-201ENSMUST00000034131 P01745 121 aa9.55□□□□□ -0.88
Vps35-201ENSMUST00000034131 MplkipQ9D011 178 aa9.54□□□□□ -0.88
Vps35-201ENSMUST00000034131 SonQ9QX47 2444 aaKnown RBP9.54□□□□□ -0.88
Vps35-201ENSMUST00000034131 Dmbt1Q60997 2085 aa9.54□□□□□ -0.88
Vps35-201ENSMUST00000034131 BikO70337 150 aa9.54□□□□□ -0.88
Vps35-201ENSMUST00000034131 BaalcQ8VHV1 145 aa9.54□□□□□ -0.88
Vps35-201ENSMUST00000034131 Ubl5Q9EPV8 73 aa9.54□□□□□ -0.88
Vps35-201ENSMUST00000034131 Notch3Q61982 2318 aa9.53□□□□□ -0.88
Vps35-201ENSMUST00000034131 SnurfQ9WU12 71 aa9.53□□□□□ -0.88
Vps35-201ENSMUST00000034131 Cspg4Q8VHY0 2327 aa9.53□□□□□ -0.88
Vps35-201ENSMUST00000034131 PlaurP35456 327 aa9.53□□□□□ -0.88
Vps35-201ENSMUST00000034131 Tfpi2O35536 230 aa9.52□□□□□ -0.88
Vps35-201ENSMUST00000034131 P01786 117 aa9.52□□□□□ -0.88
Vps35-201ENSMUST00000034131 4930470P17RikQ9D542 155 aa9.52□□□□□ -0.88
Vps35-201ENSMUST00000034131 P01755 137 aa9.52□□□□□ -0.89
Vps35-201ENSMUST00000034131 Usp24B1AY13 2617 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 516.9 ms