RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Akap13E9Q394 2776 aa13.12□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Defb42Q8BVB5 75 aa13.11□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Sostdc1Q9CQN4 206 aa13.11□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Gm17472A0A075B683 117 aa13.1□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Morn3Q8C5T4 241 aa13.1□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Prelid3aQ8VE85 172 aa13.1□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Gm7075D3Z497 112 aa13.1□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Cd164l2Q9D6W7 172 aa13.1□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Rnf152Q8BG47 203 aa13.09□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Krtap16-1A2A5X5 502 aa13.09□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 P01745 121 aa13.08□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Nop10Q9CQS2 64 aa13.08□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 NipblQ6KCD5 2798 aaKnown RBP13.08□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Tfpi2O35536 230 aa13.08□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Anapc13Q8R034 74 aa13.08□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Plac8l1Q08EJ0 177 aa13.07□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Defb26Q30KN7 186 aa13.07□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 H1fxQ80ZM5 188 aa13.07□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Defb2P82020 71 aa13.07□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Ly6hQ9WUC3 139 aa13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Epg5Q80TA9 2572 aa13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 TrrapQ80YV3 2565 aaKnown RBP13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Trav9d-3A0A075B695 113 aa13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Crlf1Q9JM58 425 aa13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Zfp462B1AWL2 2495 aaKnown RBP13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Gm7257D3YX25 99 aa13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Timm17bQ9Z0V7 172 aa13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Mast4Q811L6 2618 aa13.05□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Gm10251J3QPM5 127 aa13.05□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Ighv1-62-1A0A075B5U3 116 aa13.04□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Rpl35aO55142 110 aa13.04□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Gm9922Q8C3P1 144 aa13.04□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 4930442H23RikQ9D5G7 103 aa13.04□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Smrp1Q2MH31 260 aa13.03□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Cdc42se2Q8BGH7 84 aa13.03□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Spata25Q9DA57 226 aa13.03□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Trav4-3A0A0B4J1K1 110 aa13.03□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Sh2d1aO88890 126 aa13.03□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Atp5g1Q9CR84 136 aa13.03□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Rpl36aP83882 106 aaKnown RBP13.02□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Gm10767Q3TQP0 103 aa13.02□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Trav4d-3A0A075B625 110 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Trav13-4-dv7A0A075B6C2 110 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Scgb1b24B1B0N6 92 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Gm26661M0QWV4 156 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Eif4ebp1Q60876 117 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 SpinklQ8CEK3 90 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Ube2wQ8VDW4 151 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Wdr38Q9D994 303 aa13□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Znf740Q6NZQ6 180 aa13□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Prr13Q9CQJ5 137 aa13□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 1700010B08RikQ9DAI7 102 aa13□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Myo18bE9PV66 2605 aa13□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 1700020N15RikL7MTX3 112 aa12.99□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 CrygaP04345 174 aa12.99□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 1700011M02RikB1AX35 88 aa12.99□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Cox7a1P56392 80 aa12.98□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Gm10772F7AIG4 85 aa12.98□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Gm3250E9Q1M3 230 aa12.97□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Spry2Q9QXV8 315 aa12.97□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Trav9d-4A0A0G2JG37 103 aa12.96□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Brwd1Q921C3 2304 aa12.96□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 CdsnQ7TPC1 561 aa12.96□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Cd99Q8VCN6 175 aa12.96□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Gpha2Q925Q5 128 aa12.96□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Fxyd5P97808 178 aa12.95□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 CirbpP60824 172 aaKnown RBP12.95□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Phpt1Q9DAK9 124 aa12.95□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Trav11A0A0B4J1J9 114 aa12.94□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 4930546C10RikE9Q4Y3 121 aa12.94□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Ighv1-61P01749 117 aa12.94□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 C2cd3Q52KB6 2323 aa12.93□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 TeppQ6IMH0 216 aa12.93□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 4930544G11RikQ9CR99 193 aa12.93□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Ighv1-49A0A0A6YWX2 117 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Pglyrp4Q0VB07 374 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Lyrm7Q9DA03 104 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Gm10647E9Q8X0 124 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Lst1O08843 95 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Ppp1r32Q148A4 427 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Cox6cQ9CPQ1 76 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Setd2E9Q5F9 2537 aa12.9□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 SelenowP63300 88 aa12.9□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Pfn2Q9JJV2 140 aa12.89□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Defb50Q6TU36 73 aa12.89□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 B230359F08RikA0A0B4J1K3 109 aa12.88□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Trav13d-4A0A0G2JFX3 110 aa12.88□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 P01755 137 aa12.88□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 GfyJ3KML8 504 aa12.87□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Ly6c2P0CW03 131 aa12.87□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Ndufa3Q9CQ91 84 aa12.87□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 MobpQ9D2P8 170 aa12.87□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Esm1Q9QYY7 184 aa12.87□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Chchd7Q8K2Q5 85 aa12.87□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 MrapQ9D159 127 aa12.86□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Gm3233E9Q2H5 230 aa12.86□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 MalO09198 153 aa12.86□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Vmo1Q5SXG7 201 aa12.86□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Pla2g1bQ9Z0Y2 146 aa12.86□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Igkv1-117A0A140T8M0 119 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms