RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Defa25Q5G864 92 aa7.47□□□□□ -1.21
Clip3-201ENSMUST00000014065 Igkv4-79A0A075B5L8 119 aa7.46□□□□□ -1.21
Clip3-201ENSMUST00000014065 Krtap27-1E9PX37 202 aa7.46□□□□□ -1.21
Clip3-201ENSMUST00000014065 Lst1O08843 95 aa7.46□□□□□ -1.21
Clip3-201ENSMUST00000014065 4930432M17RikQ3V0W9 174 aa7.46□□□□□ -1.21
Clip3-201ENSMUST00000014065 Igkv1-35A0A0G2JDE5 120 aa7.46□□□□□ -1.22
Clip3-201ENSMUST00000014065 Rpl36aP83882 106 aaKnown RBP7.46□□□□□ -1.22
Clip3-201ENSMUST00000014065 Shisa2Q8QZV2 295 aa7.46□□□□□ -1.22
Clip3-201ENSMUST00000014065 Trav4d-3A0A075B625 110 aa7.45□□□□□ -1.22
Clip3-201ENSMUST00000014065 4930442H23RikQ9D5G7 103 aa7.45□□□□□ -1.22
Clip3-201ENSMUST00000014065 Trav14d-3-dv8A0A075B619 120 aa7.45□□□□□ -1.22
Clip3-201ENSMUST00000014065 Ighv1-49A0A0A6YWX2 117 aa7.45□□□□□ -1.22
Clip3-201ENSMUST00000014065 Gm867A0A1W2P7T4 151 aa7.45□□□□□ -1.22
Clip3-201ENSMUST00000014065 Sh2d1aO88890 126 aa7.45□□□□□ -1.22
Clip3-201ENSMUST00000014065 Gatd1Q8BFQ8 220 aa7.45□□□□□ -1.22
Clip3-201ENSMUST00000014065 Gm9913Q8BQQ2 135 aa7.45□□□□□ -1.22
Clip3-201ENSMUST00000014065 Nop10Q9CQS2 64 aa7.45□□□□□ -1.22
Clip3-201ENSMUST00000014065 Cox17P56394 63 aa7.45□□□□□ -1.22
Clip3-201ENSMUST00000014065 Ucn2Q99ML8 113 aa7.45□□□□□ -1.22
Clip3-201ENSMUST00000014065 Krtap26-1Q9D7N2 215 aa7.45□□□□□ -1.22
Clip3-201ENSMUST00000014065 Setd2E9Q5F9 2537 aa7.44□□□□□ -1.22
Clip3-201ENSMUST00000014065 Rpl35aO55142 110 aa7.44□□□□□ -1.22
Clip3-201ENSMUST00000014065 TeppQ6IMH0 216 aa7.44□□□□□ -1.22
Clip3-201ENSMUST00000014065 Zfp462B1AWL2 2495 aaKnown RBP7.44□□□□□ -1.22
Clip3-201ENSMUST00000014065 B230359F08RikA0A0B4J1K3 109 aa7.44□□□□□ -1.22
Clip3-201ENSMUST00000014065 Gm7075D3Z497 112 aa7.44□□□□□ -1.22
Clip3-201ENSMUST00000014065 PrlhG3UWC3 86 aa7.44□□□□□ -1.22
Clip3-201ENSMUST00000014065 Bri3P28662 125 aa7.44□□□□□ -1.22
Clip3-201ENSMUST00000014065 Fam110dQ80X91 271 aa7.44□□□□□ -1.22
Clip3-201ENSMUST00000014065 Tomm7Q9D173 55 aa7.44□□□□□ -1.22
Clip3-201ENSMUST00000014065 Igkv4-68A0A0B4J1I7 117 aa7.43□□□□□ -1.22
Clip3-201ENSMUST00000014065 Prh1P05142 261 aa7.43□□□□□ -1.22
Clip3-201ENSMUST00000014065 Crlf1Q9JM58 425 aa7.43□□□□□ -1.22
Clip3-201ENSMUST00000014065 Gm10322F7D7I4 111 aa7.43□□□□□ -1.22
Clip3-201ENSMUST00000014065 Gm20726G3UX18 150 aa7.43□□□□□ -1.22
Clip3-201ENSMUST00000014065 Eif4ebp1Q60876 117 aa7.43□□□□□ -1.22
Clip3-201ENSMUST00000014065 Ndufa12Q7TMF3 145 aaKnown RBP7.43□□□□□ -1.22
Clip3-201ENSMUST00000014065 1700010B08RikQ9DAI7 102 aa7.43□□□□□ -1.22
Clip3-201ENSMUST00000014065 C2cd3Q52KB6 2323 aa7.43□□□□□ -1.22
Clip3-201ENSMUST00000014065 Cep192E9Q4Y4 2514 aaKnown RBP7.43□□□□□ -1.22
Clip3-201ENSMUST00000014065 PemtQ61907 199 aa7.42□□□□□ -1.22
Clip3-201ENSMUST00000014065 Sostdc1Q9CQN4 206 aa7.42□□□□□ -1.22
Clip3-201ENSMUST00000014065 Ighv1-62-1A0A075B5U3 116 aa7.42□□□□□ -1.22
Clip3-201ENSMUST00000014065 MalO09198 153 aa7.42□□□□□ -1.22
Clip3-201ENSMUST00000014065 Tmem213Q08EA8 116 aa7.42□□□□□ -1.22
Clip3-201ENSMUST00000014065 Znf580Q9DB38 172 aa7.42□□□□□ -1.22
Clip3-201ENSMUST00000014065 Fgfbp3Q1HCM0 245 aa7.42□□□□□ -1.22
Clip3-201ENSMUST00000014065 Trav4-3A0A0B4J1K1 110 aa7.41□□□□□ -1.22
Clip3-201ENSMUST00000014065 Igkv6-13A0A0G2JGY3 119 aa7.41□□□□□ -1.22
Clip3-201ENSMUST00000014065 1700011M02RikB1AX35 88 aa7.41□□□□□ -1.22
Clip3-201ENSMUST00000014065 Psmb8P28063 276 aa7.41□□□□□ -1.22
Clip3-201ENSMUST00000014065 Cox7a1P56392 80 aa7.41□□□□□ -1.22
Clip3-201ENSMUST00000014065 Gm9922Q8C3P1 144 aa7.41□□□□□ -1.22
Clip3-201ENSMUST00000014065 Morn3Q8C5T4 241 aa7.41□□□□□ -1.22
Clip3-201ENSMUST00000014065 Timm17bQ9Z0V7 172 aa7.41□□□□□ -1.22
Clip3-201ENSMUST00000014065 TrrapQ80YV3 2565 aaKnown RBP7.41□□□□□ -1.22
Clip3-201ENSMUST00000014065 Gm7102J3QQ10 178 aa7.41□□□□□ -1.22
Clip3-201ENSMUST00000014065 Hectd1Q69ZR2 2618 aaKnown RBP7.41□□□□□ -1.22
Clip3-201ENSMUST00000014065 P01745 121 aa7.4□□□□□ -1.22
Clip3-201ENSMUST00000014065 Atp5eP56382 52 aa7.4□□□□□ -1.22
Clip3-201ENSMUST00000014065 Gm26661M0QWV4 156 aa7.4□□□□□ -1.22
Clip3-201ENSMUST00000014065 Gm17472A0A075B683 117 aa7.4□□□□□ -1.23
Clip3-201ENSMUST00000014065 Gm10647E9Q8X0 124 aa7.4□□□□□ -1.23
Clip3-201ENSMUST00000014065 Q99M08 65 aa7.4□□□□□ -1.23
Clip3-201ENSMUST00000014065 Esm1Q9QYY7 184 aa7.4□□□□□ -1.23
Clip3-201ENSMUST00000014065 FlnaQ8BTM8 2647 aaKnown RBP7.4□□□□□ -1.23
Clip3-201ENSMUST00000014065 Trav11A0A0B4J1J9 114 aa7.39□□□□□ -1.23
Clip3-201ENSMUST00000014065 Trav13d-4A0A0G2JFX3 110 aa7.39□□□□□ -1.23
Clip3-201ENSMUST00000014065 Trav13n-2A0A0G2JF93 110 aa7.39□□□□□ -1.23
Clip3-201ENSMUST00000014065 Hbb-b2P02089 147 aa7.39□□□□□ -1.23
Clip3-201ENSMUST00000014065 Cops9Q3U898 57 aa7.39□□□□□ -1.23
Clip3-201ENSMUST00000014065 Epg5Q80TA9 2572 aa7.39□□□□□ -1.23
Clip3-201ENSMUST00000014065 Trav13-1A0A075B644 110 aa7.39□□□□□ -1.23
Clip3-201ENSMUST00000014065 Defb26Q30KN7 186 aa7.39□□□□□ -1.23
Clip3-201ENSMUST00000014065 5730596B20RikQ8BQ08 205 aa7.39□□□□□ -1.23
Clip3-201ENSMUST00000014065 BB014433Q8C5R5 389 aa7.39□□□□□ -1.23
Clip3-201ENSMUST00000014065 Gm10300Q8C8P7 189 aa7.39□□□□□ -1.23
Clip3-201ENSMUST00000014065 Dnal4Q9DCM4 105 aa7.39□□□□□ -1.23
Clip3-201ENSMUST00000014065 Tep1P97499 2629 aa7.38□□□□□ -1.23
Clip3-201ENSMUST00000014065 Gm3443F7CCV5 94 aa7.38□□□□□ -1.23
Clip3-201ENSMUST00000014065 Defa4P28311 92 aa7.38□□□□□ -1.23
Clip3-201ENSMUST00000014065 Defa7P50705 93 aa7.38□□□□□ -1.23
Clip3-201ENSMUST00000014065 Usp9yF8VPU6 2556 aa7.37□□□□□ -1.23
Clip3-201ENSMUST00000014065 Defb18Q30KP5 85 aa7.37□□□□□ -1.23
Clip3-201ENSMUST00000014065 Gm10735Q3US96 136 aa7.37□□□□□ -1.23
Clip3-201ENSMUST00000014065 Gm5089A1L3C8 106 aa7.37□□□□□ -1.23
Clip3-201ENSMUST00000014065 Igf1P05017 153 aa7.37□□□□□ -1.23
Clip3-201ENSMUST00000014065 Fxyd5P97808 178 aa7.37□□□□□ -1.23
Clip3-201ENSMUST00000014065 NipblQ6KCD5 2798 aaKnown RBP7.36□□□□□ -1.23
Clip3-201ENSMUST00000014065 Ankrd11E9Q4F7 2643 aa7.36□□□□□ -1.23
Clip3-201ENSMUST00000014065 P01755 137 aa7.36□□□□□ -1.23
Clip3-201ENSMUST00000014065 Cdc42se2Q8BGH7 84 aa7.36□□□□□ -1.23
Clip3-201ENSMUST00000014065 Ighv8-11A0A075B5X4 119 aa7.36□□□□□ -1.23
Clip3-201ENSMUST00000014065 Xcl1P47993 114 aa7.35□□□□□ -1.23
Clip3-201ENSMUST00000014065 Defa20Q45VN2 95 aa7.35□□□□□ -1.23
Clip3-201ENSMUST00000014065 Lage3Q9CR70 148 aa7.35□□□□□ -1.23
Clip3-201ENSMUST00000014065 Mzt1Q8BUR9 78 aa7.35□□□□□ -1.23
Clip3-201ENSMUST00000014065 Prss58Q8BW11 241 aa7.35□□□□□ -1.23
Clip3-201ENSMUST00000014065 Rnase1P00683 149 aa7.35□□□□□ -1.23
Clip3-201ENSMUST00000014065 Ighv1-61P01749 117 aa7.35□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms