RNA–Protein interactions for RNA: ENSMUST00000008088.8

Ttc9b-201, Transcript of Tetratricopeptide repeat protein 9B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ttc9b, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9b-201ENSMUST00000008088 Gm9242J3QNY1 357 aa13.89□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Srsf9Q9D0B0 222 aaKnown RBP13.89□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Nbeal2Q6ZQA0 2742 aa13.89□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 D730001G18RikA0A087WQU7 115 aa13.88□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Shisa2Q8QZV2 295 aa13.88□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Igkv4-72A0A0B4J1I4 117 aa13.87□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Spink4O35679 86 aa13.87□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Prp2P05143 317 aa13.87□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Rmi2Q3UPE3 149 aa13.87□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Tfpi2O35536 230 aa13.87□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Pgpep1Q9ESW8 209 aa13.87□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Gm6812B1AXU1 112 aa13.86□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Gm933J3QPC1 141 aa13.86□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Ppp1r32Q148A4 427 aa13.86□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Smr3aQ61900 147 aa13.86□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 BC048562Q80ZQ7 204 aa13.85□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 RetnQ99P87 114 aa13.85□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Tmem238A9JSM3 176 aa13.84□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Znf740Q6NZQ6 180 aa13.84□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Cmc4Q61908 68 aa13.84□□□□□ -0.19
Ttc9b-201ENSMUST00000008088 Ighv1-59A0A0A6YXE0 117 aa13.83□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Igkv4-61A0A0G2JH00 117 aa13.83□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Cited1P97769 203 aa13.83□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Spink13Q3UTS8 97 aa13.83□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Tspan13Q9D8C2 204 aa13.83□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Defb10Q8R2I8 73 aa13.83□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Vps25Q9CQ80 176 aa13.83□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 P01823 113 aa13.82□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Gm904Q3V2L5 102 aa13.82□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Gm43218A0A0G2JGT0 114 aa13.81□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 4930546C10RikE9Q4Y3 121 aa13.81□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Tomm7Q9D173 55 aa13.81□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Igkv4-53A0A0G2JFC6 119 aa13.81□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Gm7138L7N2C3 230 aa13.8□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Prelid3aQ8VE85 172 aa13.8□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Gm3238W4VSP7 230 aa13.8□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Ccl25O35903 144 aa13.79□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Wfdc17Q5SSJ1 76 aa13.79□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 4930442H23RikQ9D5G7 103 aa13.79□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Ighv1-62-1A0A075B5U3 116 aa13.78□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 CckP09240 115 aa13.78□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Tac4Q99N14 128 aa13.78□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Ly6gP35461 111 aa13.78□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Dad1P61804 113 aa13.78□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 4930432M17RikQ3V0W9 174 aa13.78□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Vmo1Q5SXG7 201 aa13.78□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Higd2aQ9CQJ1 106 aa13.78□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Morn5Q9DAI9 170 aa13.78□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 Gm26920S4R2A5 56 aa13.78□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 PolqQ8CGS6 2544 aa13.77□□□□□ -0.2
Ttc9b-201ENSMUST00000008088 PrcdQ00LT2 53 aa13.77□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Foxc1Q61572 553 aa13.77□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Rpl24Q8BP67 157 aaKnown RBP13.77□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Atp6v0e2Q91XE7 81 aa13.77□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 MobpQ9D2P8 170 aa13.77□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Rab37Q9JKM7 223 aa13.77□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Col6a5A6H584 2640 aa13.76□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Defa3P28310 93 aa13.76□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Defa10P50708 93 aa13.76□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Defa15P50713 93 aa13.76□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Ighv8-5A0A0A6YY60 119 aa13.76□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Trav4-3A0A0B4J1K1 110 aa13.76□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Trav13-4-dv7A0A075B6C2 110 aa13.75□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Trav13n-1A0A0G2JEU8 110 aa13.75□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Notch2O35516 2470 aa13.75□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Gata3P23772 443 aa13.75□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Gm11444F6QMA6 170 aa13.74□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Zc2hc1bQ9D534 172 aa13.73□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 E130114P18RikF6S0S7 154 aa13.73□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Klk9Q32M27 251 aa13.73□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Slamf6Q9ET39 351 aa13.73□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Gm36176A0A1W2P8D5 158 aa13.72□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Tm2d2Q8R0I4 213 aa13.72□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Hint1P70349 126 aaKnown RBP13.71□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Odf3l2Q3TZ65 277 aa13.71□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 9430069I07RikQ9CX21 111 aa13.71□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Spry2Q9QXV8 315 aa13.71□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Trbv13-2A0A140T8N6 113 aa13.71□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Atp5g3P56384 141 aa13.71□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Rbx1P62878 108 aa13.71□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Atp5g1Q9CR84 136 aa13.71□□□□□ -0.21
Ttc9b-201ENSMUST00000008088 Gm45213A0A0U1RNZ6 101 aa13.7□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 Pxt1Q8K459 51 aa13.7□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 Klk11Q9QYN3 276 aa13.7□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 NpwA0A1L1STR8 176 aa13.7□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 Gm6793B2RXM2 351 aa13.7□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 Timm17bQ9Z0V7 172 aa13.7□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 Gm11020F6ZGD5 61 aa13.69□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 Spata3Q9D9T6 193 aa13.69□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 Zfp951A0A087WRH0 451 aa13.68□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 Trav13d-4A0A0G2JFX3 110 aa13.68□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 Igkv1-99F6XWB2 120 aa13.68□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 Trav11A0A0B4J1J9 114 aa13.68□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 Glrp1E9Q9S8 174 aa13.68□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 4930415O20RikQ8CDT5 131 aa13.68□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 Trav4d-3A0A075B625 110 aa13.67□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 Phxr5P08399 672 aa13.67□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 CirbpP60824 172 aaKnown RBP13.66□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 NrepQ07475 68 aa13.66□□□□□ -0.22
Ttc9b-201ENSMUST00000008088 1700010B08RikQ9DAI7 102 aa13.66□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 68.9 ms