RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Ifitm10Q8BR26 201 aa9.81□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Cox8cA6H666 72 aa9.8□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Ube2d1P61080 147 aaKnown RBP9.8□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Gm17732E9Q5I2 61 aa9.8□□□□□ -0.84
Rnf4-204ENSMUST00000182047 FcorP0DJI6 106 aa9.8□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Defb47Q30KN1 79 aa9.8□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Ankrd39Q9D2X0 183 aa9.79□□□□□ -0.84
Rnf4-204ENSMUST00000182047 4930470P17RikQ9D542 155 aa9.79□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Lyzl4Q9D925 145 aa9.79□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Itpr2Q9Z329 2701 aa9.79□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Tcrg-C1A0A075B5Z0 172 aa9.79□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Gm7849D3YX03 116 aa9.79□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Polr2kQ63871 58 aa9.79□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Gphb5Q812B2 130 aa9.79□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Gm10300Q8C8P7 189 aa9.79□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Higd1aQ9JLR9 95 aa9.79□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Ighv1-63A0A075B5X2 117 aa9.78□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Gm6812B1AXU1 112 aa9.78□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Lect2O88803 151 aa9.78□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Crlf1Q9JM58 425 aa9.78□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Tex15F8VPN2 2785 aa9.78□□□□□ -0.84
Rnf4-204ENSMUST00000182047 P01753 117 aa9.78□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Mrpl35Q9CQL6 188 aa9.78□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Crip2Q9DCT8 208 aaKnown RBP9.78□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Gm9513B3GLJ6 99 aa9.77□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Krtap24-1G3X9A2 248 aa9.77□□□□□ -0.84
Rnf4-204ENSMUST00000182047 1500011B03RikQ3TTH7 73 aa9.77□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Rnf152Q8BG47 203 aa9.77□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Anapc13Q8R034 74 aa9.77□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Il1f10Q8R459 152 aa9.77□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Cdip1Q9DB75 208 aa9.77□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Ndufs7Q9DC70 224 aa9.77□□□□□ -0.84
Rnf4-204ENSMUST00000182047 Gm7075D3Z497 112 aa9.76□□□□□ -0.85
Rnf4-204ENSMUST00000182047 4930596D02RikQ3V0H9 216 aa9.76□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Hivep3A2A884 2348 aa9.76□□□□□ -0.85
Rnf4-204ENSMUST00000182047 9530053A07RikE9PVG8 2581 aa9.76□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Fam19a4Q7TPG5 135 aa9.76□□□□□ -0.85
Rnf4-204ENSMUST00000182047 H1fxQ80ZM5 188 aa9.76□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Dmrt3Q80WT2 476 aa9.76□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Ighv8-5A0A0A6YY60 119 aa9.75□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Gm933J3QPC1 141 aa9.75□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Tenm1Q9WTS4 2731 aa9.75□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Ube2d3P61079 147 aa9.75□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Ube2d2P62838 147 aa9.75□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Smrp1Q2MH31 260 aa9.75□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Mpv17l2Q8VIK2 200 aa9.75□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Gm20730A0A075B5J6 119 aa9.74□□□□□ -0.85
Rnf4-204ENSMUST00000182047 BC048562Q80ZQ7 204 aa9.74□□□□□ -0.85
Rnf4-204ENSMUST00000182047 PrlhG3UWC3 86 aa9.74□□□□□ -0.85
Rnf4-204ENSMUST00000182047 P01786 117 aa9.74□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Q9DAQ5 155 aa9.73□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Nbeal2Q6ZQA0 2742 aa9.73□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Tac4Q99N14 128 aa9.73□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Morn5Q9DAI9 170 aa9.73□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Hivep1Q03172 2688 aa9.73□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Trav4n-4A0A075B615 110 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Gm10135F6TEE5 83 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Gm10490F6VBM2 120 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 BC025920Q3US60 128 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Atp5lQ9CPQ8 103 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Ighv1-66A0A075B5X5 117 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Rmi2Q3UPE3 149 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Trav7d-3Q5R1I1 112 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Mfap4Q9D1H9 257 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Cd164l2Q9D6W7 172 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Brwd1Q921C3 2304 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 NpwA0A1L1STR8 176 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Lypd5Q9D7Z7 256 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Tmem263Q9DAM7 115 aa9.72□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Trav13d-1A0A075B606 110 aa9.71□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Gm20499D3Z4G5 72 aa9.71□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Gm11020F6ZGD5 61 aa9.71□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Pglyrp1O88593 182 aa9.71□□□□□ -0.85
Rnf4-204ENSMUST00000182047 CdsnQ7TPC1 561 aa9.71□□□□□ -0.85
Rnf4-204ENSMUST00000182047 Fam110dQ80X91 271 aa9.71□□□□□ -0.85
Rnf4-204ENSMUST00000182047 LeprotO89013 131 aa9.71□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Ly6c2P0CW03 131 aa9.71□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Ifi27l2aQ8R412 90 aa9.71□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Timm17aQ9Z0V8 171 aa9.7□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Trbv16A0A0B4J1H3 115 aa9.69□□□□□ -0.86
Rnf4-204ENSMUST00000182047 B230217C12RikE9Q3Z1 139 aa9.69□□□□□ -0.86
Rnf4-204ENSMUST00000182047 TtrP07309 147 aa9.69□□□□□ -0.86
Rnf4-204ENSMUST00000182047 P84751 237 aa9.69□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Igkv4-91A0A075B5L2 119 aa9.69□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Gm29423A0A087WRM1 55 aa9.69□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Igkv4-68A0A0B4J1I7 117 aa9.69□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Scgb1b24B1B0N6 92 aa9.69□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Trav9n-2A0A0G2JDP3 113 aa9.68□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Gm4861Q8C5A4 106 aa9.68□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Lyrm7Q9DA03 104 aa9.68□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Cox6b1P56391 86 aaKnown RBP9.68□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Rpl35aO55142 110 aa9.67□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Gm815Q3UWS2 115 aa9.67□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Atp6v0e2Q91XE7 81 aa9.67□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Smr3aQ61900 147 aa9.67□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Stab1Q8R4Y4 2571 aa9.66□□□□□ -0.86
Rnf4-204ENSMUST00000182047 1700020N15RikL7MTX3 112 aa9.66□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Atp5g3P56384 141 aa9.66□□□□□ -0.86
Rnf4-204ENSMUST00000182047 A530064D06RikQ8BNV8 229 aa9.66□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Ighv1-85A0A075B5Y6 117 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 133.9 ms