RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 Defb12Q8K4N3 78 aa12.75□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Rpl18aP62717 176 aaKnown RBP12.75□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Gm12689Q8BQU9 117 aa12.75□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Higd2aQ9CQJ1 106 aa12.75□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Gm10735Q3US96 136 aa12.75□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Ndufc1Q9CQY9 76 aa12.75□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Arhgef17Q80U35 2057 aa12.75□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Igkv3-5A0A140T8M6 119 aa12.74□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Ighv8-12A0A0G2JDE1 119 aa12.74□□□□□ -0.37
Shroom3-204ENSMUST00000168878 1110002E22RikE0CYV9 1786 aa12.73□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Sh2d1aO88890 126 aa12.73□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Naa38Q9D2U5 125 aa12.73□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Ighv2-3A0A075B696 115 aa12.73□□□□□ -0.37
Shroom3-204ENSMUST00000168878 HelzQ6DFV5 1964 aaKnown RBP12.73□□□□□ -0.37
Shroom3-204ENSMUST00000168878 E130116L18RikQ8BMV6 101 aa12.72□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Wipf1Q8K1I7 493 aa12.72□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Spink4O35679 86 aa12.72□□□□□ -0.37
Shroom3-204ENSMUST00000168878 A130051J06RikQ8CAU1 227 aa12.72□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Pip4p1Q3TWL2 284 aa12.72□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Timm17bQ9Z0V7 172 aa12.72□□□□□ -0.37
Shroom3-204ENSMUST00000168878 Ighv8-5A0A0A6YY60 119 aa12.71□□□□□ -0.37
Shroom3-204ENSMUST00000168878 BtcQ05928 177 aa12.71□□□□□ -0.38
Shroom3-204ENSMUST00000168878 1700012A03RikQ9DAF1 130 aa12.71□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Ube2aQ9Z255 152 aa12.71□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Tfpi2O35536 230 aa12.7□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Vpreb3D3Z6J4 130 aa12.7□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Fgfbp3Q1HCM0 245 aa12.7□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Ighv2-6-8A0A0A6YWY9 116 aa12.69□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Tcl1b3P56842 122 aa12.69□□□□□ -0.38
Shroom3-204ENSMUST00000168878 TshbP12656 138 aa12.69□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Ly6hQ9WUC3 139 aa12.69□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Med13lQ6JPI3 2207 aa12.68□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Ufsp1Q9CZP0 217 aa12.68□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Wdr38Q9D994 303 aa12.67□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Notch4P31695 1964 aa12.67□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Ube2d4D3YUH6 135 aa12.67□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Gm1968Q3T9I3 115 aa12.67□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Gm10401E9Q3K6 71 aa12.66□□□□□ -0.38
Shroom3-204ENSMUST00000168878 NrgnP60761 78 aa12.66□□□□□ -0.38
Shroom3-204ENSMUST00000168878 C1qcQ02105 246 aa12.65□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Ly6gP35461 111 aa12.65□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Klk9Q32M27 251 aa12.65□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Smim1P0C8K7 78 aa12.65□□□□□ -0.38
Shroom3-204ENSMUST00000168878 Dscaml1Q4VA61 2053 aa12.64□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Igkv3-10A0A0G2JGN0 119 aa12.64□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Gm10226O88253 85 aa12.63□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Ep300B2RWS6 2412 aa12.63□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Wdr90Q6ZPG2 1874 aa12.63□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Gm17521F6QAC8 156 aa12.63□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Pou2af1Q64693 256 aa12.63□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Cspg4Q8VHY0 2327 aa12.63□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Ighv3-3A0A0A6YWL2 116 aa12.62□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Q9D8Q6 235 aa12.62□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Ighv1-66A0A075B5X5 117 aa12.62□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Ighv1-63A0A075B5X2 117 aa12.62□□□□□ -0.39
Shroom3-204ENSMUST00000168878 EnhoQ8K1D8 76 aa12.62□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Pcnx3Q8VI59 2028 aa12.61□□□□□ -0.39
Shroom3-204ENSMUST00000168878 9530003J23RikQ8BM26 151 aa12.6□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Prr15lQ8JZM2 100 aa12.6□□□□□ -0.39
Shroom3-204ENSMUST00000168878 1520401A03RikA0A0J9YVH6 598 aa12.6□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Fer1l4A3KGK3 1992 aa12.6□□□□□ -0.39
Shroom3-204ENSMUST00000168878 CnfnQ6PCW6 111 aa12.6□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Wnk1P83741 2377 aa12.6□□□□□ -0.39
Shroom3-204ENSMUST00000168878 SvipQ3UZP4 77 aa12.59□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Wisp2Q9Z0G4 251 aa12.59□□□□□ -0.39
Shroom3-204ENSMUST00000168878 P01729 129 aa12.59□□□□□ -0.39
Shroom3-204ENSMUST00000168878 2010109I03RikQ9CQ11 111 aa12.59□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Ighv10-1A0A0B4J1J6 119 aa12.59□□□□□ -0.39
Shroom3-204ENSMUST00000168878 9430015G10RikA2ASP7 199 aa12.59□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Psmb8P28063 276 aa12.59□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Vpreb1P13372 142 aa12.58□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Rnf152Q8BG47 203 aa12.58□□□□□ -0.39
Shroom3-204ENSMUST00000168878 Gm6899Q3USS0 134 aa12.58□□□□□ -0.4
Shroom3-204ENSMUST00000168878 P01823 113 aa12.58□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Polr2kQ63871 58 aa12.58□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Gm16223Q8CBM3 117 aa12.58□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Fam19a1Q7TPG8 133 aa12.57□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Ighv1-62-1A0A075B5U3 116 aa12.57□□□□□ -0.4
Shroom3-204ENSMUST00000168878 SptssbQ925E8 76 aa12.57□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Spry2Q9QXV8 315 aa12.57□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Dkk4Q8VEJ3 221 aa12.56□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Gm9805F6YK59 57 aa12.56□□□□□ -0.4
Shroom3-204ENSMUST00000168878 AgrnA2ASQ1 1950 aa12.56□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Edn2P22389 175 aa12.56□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Fgf23Q9EPC2 251 aa12.56□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Pla2g2eQ9QUL3 142 aa12.56□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Sox16Q62247 57 aa12.54□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Serp2Q6TAW2 65 aa12.54□□□□□ -0.4
Shroom3-204ENSMUST00000168878 DysfQ9ESD7 2090 aa12.54□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Plac8l1Q08EJ0 177 aa12.54□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Ly6c2P0CW03 131 aa12.53□□□□□ -0.4
Shroom3-204ENSMUST00000168878 B430305J03RikQ8BQQ8 176 aa12.53□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Gm10322F7D7I4 111 aa12.53□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Gm9925F6T2U3 160 aa12.53□□□□□ -0.4
Shroom3-204ENSMUST00000168878 A830005F24RikQ8BRT5 167 aa12.53□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Ighv1-72P01751 139 aa12.53□□□□□ -0.4
Shroom3-204ENSMUST00000168878 P06320 134 aa12.53□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Cox8cA6H666 72 aa12.53□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Esm1Q9QYY7 184 aa12.52□□□□□ -0.4
Shroom3-204ENSMUST00000168878 Ighv1-5A0A0A6YWG2 117 aa12.52□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms