RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 A0A1Y7VMQ4 148 aa13.58□□□□□ -0.23
Lig3-204ENSMUST00000131537 Igkv1-99F6XWB2 120 aa13.58□□□□□ -0.23
Lig3-204ENSMUST00000131537 Tmem238lA0A1B0GS74 79 aa13.58□□□□□ -0.24
Lig3-204ENSMUST00000131537 Reg3bP35230 175 aa13.58□□□□□ -0.24
Lig3-204ENSMUST00000131537 Timm10bQ9WV96 100 aa13.58□□□□□ -0.24
Lig3-204ENSMUST00000131537 Ighv2-6A0A075B6A7 116 aa13.57□□□□□ -0.24
Lig3-204ENSMUST00000131537 2310050C09RikG5E8Z3 280 aa13.57□□□□□ -0.24
Lig3-204ENSMUST00000131537 Plpp2Q9DAX2 276 aa13.57□□□□□ -0.24
Lig3-204ENSMUST00000131537 PlecQ9QXS1 4691 aaKnown RBP13.57□□□□□ -0.24
Lig3-204ENSMUST00000131537 Ighv8-8A0A0A6YXQ0 119 aa13.56□□□□□ -0.24
Lig3-204ENSMUST00000131537 Rpl36-ps4A0A140T8U4 117 aa13.56□□□□□ -0.24
Lig3-204ENSMUST00000131537 Bsph1Q3UW26 133 aa13.56□□□□□ -0.24
Lig3-204ENSMUST00000131537 Fam241bQ9D882 120 aa13.56□□□□□ -0.24
Lig3-204ENSMUST00000131537 Q5BN45 167 aa13.55□□□□□ -0.24
Lig3-204ENSMUST00000131537 Eif4ebp1Q60876 117 aa13.55□□□□□ -0.24
Lig3-204ENSMUST00000131537 Esp4A8R0T8 117 aa13.55□□□□□ -0.24
Lig3-204ENSMUST00000131537 Insl3O09107 122 aa13.55□□□□□ -0.24
Lig3-204ENSMUST00000131537 Plac8l1Q08EJ0 177 aa13.55□□□□□ -0.24
Lig3-204ENSMUST00000131537 Tm2d2Q8R0I4 213 aa13.55□□□□□ -0.24
Lig3-204ENSMUST00000131537 PolP10400 120 aa13.54□□□□□ -0.24
Lig3-204ENSMUST00000131537 E130208F15RikQ3UPV3 143 aa13.54□□□□□ -0.24
Lig3-204ENSMUST00000131537 OtorQ9JIE3 128 aa13.54□□□□□ -0.24
Lig3-204ENSMUST00000131537 Rbx1P62878 108 aa13.53□□□□□ -0.24
Lig3-204ENSMUST00000131537 Q3UNZ8 350 aa13.53□□□□□ -0.24
Lig3-204ENSMUST00000131537 Ifitm1Q9D103 106 aa13.53□□□□□ -0.24
Lig3-204ENSMUST00000131537 Gm45785A0A1B0GT05 94 aa13.53□□□□□ -0.24
Lig3-204ENSMUST00000131537 FcorP0DJI6 106 aa13.53□□□□□ -0.24
Lig3-204ENSMUST00000131537 Pla2g2eQ9QUL3 142 aa13.53□□□□□ -0.24
Lig3-204ENSMUST00000131537 Ighv1-11A0A0A6YWI9 117 aa13.52□□□□□ -0.25
Lig3-204ENSMUST00000131537 P03985 172 aa13.51□□□□□ -0.25
Lig3-204ENSMUST00000131537 Gm4861Q8C5A4 106 aa13.51□□□□□ -0.25
Lig3-204ENSMUST00000131537 Igkv3-9A0A140T8P4 119 aa13.5□□□□□ -0.25
Lig3-204ENSMUST00000131537 SnrpeP62305 92 aaKnown RBP13.5□□□□□ -0.25
Lig3-204ENSMUST00000131537 Odf3l2Q3TZ65 277 aa13.5□□□□□ -0.25
Lig3-204ENSMUST00000131537 AY074887Q8R5F9 132 aa13.5□□□□□ -0.25
Lig3-204ENSMUST00000131537 HilpdaQ9JLS0 64 aa13.5□□□□□ -0.25
Lig3-204ENSMUST00000131537 Cox7a2lQ61387 111 aa13.5□□□□□ -0.25
Lig3-204ENSMUST00000131537 Zfand2bQ91X58 257 aa13.5□□□□□ -0.25
Lig3-204ENSMUST00000131537 Gm1968Q3T9I3 115 aa13.49□□□□□ -0.25
Lig3-204ENSMUST00000131537 BC025920Q3US60 128 aa13.49□□□□□ -0.25
Lig3-204ENSMUST00000131537 RetnlaQ9EP95 111 aa13.49□□□□□ -0.25
Lig3-204ENSMUST00000131537 PemtQ61907 199 aa13.48□□□□□ -0.25
Lig3-204ENSMUST00000131537 Fam19a4Q7TPG5 135 aa13.48□□□□□ -0.25
Lig3-204ENSMUST00000131537 Psors1c2Q80ZC9 134 aa13.48□□□□□ -0.25
Lig3-204ENSMUST00000131537 Gm21693J3QK27 380 aa13.48□□□□□ -0.25
Lig3-204ENSMUST00000131537 Igll1P20764 209 aa13.48□□□□□ -0.25
Lig3-204ENSMUST00000131537 Gng4P50153 75 aa13.48□□□□□ -0.25
Lig3-204ENSMUST00000131537 Gm10842Q3U587 122 aa13.48□□□□□ -0.25
Lig3-204ENSMUST00000131537 Malsu1Q9CWV0 228 aa13.48□□□□□ -0.25
Lig3-204ENSMUST00000131537 Atxn7l1Q9CZ05 146 aa13.48□□□□□ -0.25
Lig3-204ENSMUST00000131537 Tspan13Q9D8C2 204 aa13.48□□□□□ -0.25
Lig3-204ENSMUST00000131537 Igkv3-1A0A075B5P1 119 aa13.47□□□□□ -0.25
Lig3-204ENSMUST00000131537 Gm9747Q810H1 104 aa13.47□□□□□ -0.25
Lig3-204ENSMUST00000131537 Cdc42se2Q8BGH7 84 aa13.47□□□□□ -0.25
Lig3-204ENSMUST00000131537 Tm4sf20Q9CQY8 226 aa13.47□□□□□ -0.25
Lig3-204ENSMUST00000131537 Gm9047B9EJX3 177 aa13.46□□□□□ -0.25
Lig3-204ENSMUST00000131537 NpyP57774 97 aa13.46□□□□□ -0.25
Lig3-204ENSMUST00000131537 Dnah7aE9Q0T8 4024 aa13.45□□□□□ -0.26
Lig3-204ENSMUST00000131537 Hist3h2bbQ8CGP0 126 aa13.45□□□□□ -0.26
Lig3-204ENSMUST00000131537 Hist3h2baQ9D2U9 126 aa13.45□□□□□ -0.26
Lig3-204ENSMUST00000131537 TgO08710 2766 aa13.45□□□□□ -0.26
Lig3-204ENSMUST00000131537 Zfp951A0A087WRH0 451 aa13.44□□□□□ -0.26
Lig3-204ENSMUST00000131537 Prh1P05142 261 aa13.44□□□□□ -0.26
Lig3-204ENSMUST00000131537 Prp2P05143 317 aa13.44□□□□□ -0.26
Lig3-204ENSMUST00000131537 Igkv4-79A0A075B5L8 119 aa13.43□□□□□ -0.26
Lig3-204ENSMUST00000131537 Cfap126Q6P8X9 189 aa13.43□□□□□ -0.26
Lig3-204ENSMUST00000131537 Higd1aQ9JLR9 95 aa13.43□□□□□ -0.26
Lig3-204ENSMUST00000131537 EnhoQ8K1D8 76 aa13.41□□□□□ -0.26
Lig3-204ENSMUST00000131537 MobpQ9D2P8 170 aa13.41□□□□□ -0.26
Lig3-204ENSMUST00000131537 Ighv1-72P01751 139 aa13.4□□□□□ -0.26
Lig3-204ENSMUST00000131537 TcraP01849 138 aa13.4□□□□□ -0.26
Lig3-204ENSMUST00000131537 Gm10130F6ZHM5 101 aa13.4□□□□□ -0.26
Lig3-204ENSMUST00000131537 Hist1h2bfP10853 126 aa13.39□□□□□ -0.27
Lig3-204ENSMUST00000131537 PlnP61014 52 aa13.39□□□□□ -0.27
Lig3-204ENSMUST00000131537 Hist1h2bbQ64475 126 aa13.39□□□□□ -0.27
Lig3-204ENSMUST00000131537 Hist1h2bkQ8CGP1 126 aaKnown RBP13.39□□□□□ -0.27
Lig3-204ENSMUST00000131537 Hist1h2bpQ8CGP2 126 aaKnown RBP13.39□□□□□ -0.27
Lig3-204ENSMUST00000131537 Timm17aQ9Z0V8 171 aa13.39□□□□□ -0.27
Lig3-204ENSMUST00000131537 Vamp3P63024 103 aa13.37□□□□□ -0.27
Lig3-204ENSMUST00000131537 Gm16485Q8C4B7 115 aa13.37□□□□□ -0.27
Lig3-204ENSMUST00000131537 Ighv13-2A0A0A6YWN3 119 aa13.37□□□□□ -0.27
Lig3-204ENSMUST00000131537 Trav7-6A0A075B640 112 aa13.36□□□□□ -0.27
Lig3-204ENSMUST00000131537 Ighv2-6-8A0A0A6YWY9 116 aa13.36□□□□□ -0.27
Lig3-204ENSMUST00000131537 Tmem170bP86050 132 aa13.36□□□□□ -0.27
Lig3-204ENSMUST00000131537 Cd33Q63994 403 aa13.36□□□□□ -0.27
Lig3-204ENSMUST00000131537 Ifitm10Q8BR26 201 aa13.36□□□□□ -0.27
Lig3-204ENSMUST00000131537 Psmb2Q9R1P3 201 aa13.36□□□□□ -0.27
Lig3-204ENSMUST00000131537 Esp34G3UXG0 151 aa13.35□□□□□ -0.27
Lig3-204ENSMUST00000131537 RetnQ99P87 114 aa13.35□□□□□ -0.27
Lig3-204ENSMUST00000131537 Defa15P50713 93 aa13.35□□□□□ -0.27
Lig3-204ENSMUST00000131537 Gm11444F6QMA6 170 aa13.34□□□□□ -0.27
Lig3-204ENSMUST00000131537 Gm10542F6XDR3 90 aa13.34□□□□□ -0.27
Lig3-204ENSMUST00000131537 Prss29Q99MS4 279 aa13.34□□□□□ -0.27
Lig3-204ENSMUST00000131537 Igkv6-13A0A0G2JGY3 119 aa13.33□□□□□ -0.28
Lig3-204ENSMUST00000131537 Krtap11-1E9Q2E9 183 aa13.33□□□□□ -0.28
Lig3-204ENSMUST00000131537 Bak1O08734 209 aa13.33□□□□□ -0.28
Lig3-204ENSMUST00000131537 Tfpi2O35536 230 aa13.33□□□□□ -0.28
Lig3-204ENSMUST00000131537 P01794 123 aa13.33□□□□□ -0.28
Lig3-204ENSMUST00000131537 Trav12-3A0A075B648 115 aa13.32□□□□□ -0.28
Lig3-204ENSMUST00000131537 Igkv2-137A0A0B4J1H6 120 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 43 ms