RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Q9D8Q6 235 aa5.48□□□□□ -1.53
Chm-202ENSMUST00000113388 IgipA0A1B0GR74 53 aa5.47□□□□□ -1.53
Chm-202ENSMUST00000113388 Zcchc24B2RVL6 241 aaKnown RBP5.47□□□□□ -1.53
Chm-202ENSMUST00000113388 P06330 118 aa5.47□□□□□ -1.53
Chm-202ENSMUST00000113388 4930442H23RikQ9D5G7 103 aa5.47□□□□□ -1.53
Chm-202ENSMUST00000113388 ArtnQ9Z0L2 224 aa5.47□□□□□ -1.53
Chm-202ENSMUST00000113388 PkdrejQ9Z0T6 2126 aa5.47□□□□□ -1.53
Chm-202ENSMUST00000113388 Celsr2Q9R0M0 2920 aa5.47□□□□□ -1.53
Chm-202ENSMUST00000113388 E130114P18RikF6S0S7 154 aa5.47□□□□□ -1.53
Chm-202ENSMUST00000113388 Sdhaf1Q3U276 118 aa5.47□□□□□ -1.53
Chm-202ENSMUST00000113388 Zc2hc1bQ9D534 172 aa5.47□□□□□ -1.53
Chm-202ENSMUST00000113388 Defb29Q8BGW9 78 aa5.47□□□□□ -1.53
Chm-202ENSMUST00000113388 Ighv1-64A0A075B5X3 117 aa5.46□□□□□ -1.54
Chm-202ENSMUST00000113388 Ighv1-85A0A075B5Y6 117 aa5.46□□□□□ -1.54
Chm-202ENSMUST00000113388 Spink4O35679 86 aa5.46□□□□□ -1.54
Chm-202ENSMUST00000113388 Acyp1P56376 99 aa5.46□□□□□ -1.54
Chm-202ENSMUST00000113388 SptssbQ925E8 76 aa5.46□□□□□ -1.54
Chm-202ENSMUST00000113388 Lyg1Q9D7Q0 197 aa5.46□□□□□ -1.54
Chm-202ENSMUST00000113388 1700074P13RikQ9D9G7 251 aa5.46□□□□□ -1.54
Chm-202ENSMUST00000113388 Trav9-1A0A075B601 112 aa5.46□□□□□ -1.54
Chm-202ENSMUST00000113388 UqcrqQ9CQ69 82 aa5.46□□□□□ -1.54
Chm-202ENSMUST00000113388 Ighv1-74A0A0G2JGK2 117 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 P01750 117 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Wt1P22561 449 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Ccl21aP84444 133 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Ccl21bP86792 133 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Ccl21cP86793 133 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Gm20730A0A075B5J6 119 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Ighv4-1A0A075B5R5 116 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Ccl11P48298 97 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Fancd2osQ9D4K4 178 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Iglv3A0A0B4J1K5 122 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 4930447F04RikA2AFR2 126 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Atox1O08997 68 aaKnown RBP5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Mrpl35Q9CQL6 188 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Ighv7-3A0A075B5R2 120 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Trav9d-1A0A075B699 112 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Krtap16-1A2A5X5 502 aa5.45□□□□□ -1.54
Chm-202ENSMUST00000113388 Nsun4C4P6S0 806 aaKnown RBP5.44□□□□□ -1.54
Chm-202ENSMUST00000113388 Gm9925F6T2U3 160 aa5.44□□□□□ -1.54
Chm-202ENSMUST00000113388 Csmd2V9GX34 3611 aa5.44□□□□□ -1.54
Chm-202ENSMUST00000113388 Defb2P82020 71 aa5.44□□□□□ -1.54
Chm-202ENSMUST00000113388 Defb18Q30KP5 85 aa5.44□□□□□ -1.54
Chm-202ENSMUST00000113388 5730596B20RikQ8BQ08 205 aa5.44□□□□□ -1.54
Chm-202ENSMUST00000113388 Bricd5Q8BV89 174 aa5.44□□□□□ -1.54
Chm-202ENSMUST00000113388 Mrps12O35680 139 aa5.44□□□□□ -1.54
Chm-202ENSMUST00000113388 Ormdl1Q921I0 153 aa5.44□□□□□ -1.54
Chm-202ENSMUST00000113388 Med13lQ6JPI3 2207 aa5.44□□□□□ -1.54
Chm-202ENSMUST00000113388 Ighv1-37A0A0A6YW32 117 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Gm17732E9Q5I2 61 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 SrarpQ3ULG3 163 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Gm6899Q3USS0 134 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Snai3Q9QY31 287 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Ube2aQ9Z255 152 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 P0C1Z5 52 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Edn3P48299 214 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 4930564D02RikQ9D4S4 103 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 EppinQ9DA01 134 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Tln2Q71LX4 2375 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Ighv3-8A0A075B5T0 131 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Igkv13-85A0A075B666 115 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Gm2564F6Z9S8 108 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Ndufs5Q99LY9 106 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 4930535I16RikQ9CUI2 172 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 CstadQ9D245 104 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Ighv1-9A0A0A6YW37 117 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Igkv1-35A0A0G2JDE5 120 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Dkk1O54908 272 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Trav6d-4Q5R1I0 115 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Znrf1Q91V17 227 aa5.43□□□□□ -1.54
Chm-202ENSMUST00000113388 Igkv12-89A0A0G2JGW8 112 aa5.42□□□□□ -1.54
Chm-202ENSMUST00000113388 Gm11011D3Z3L9 86 aa5.42□□□□□ -1.54
Chm-202ENSMUST00000113388 Ly6lH3BJG9 140 aa5.42□□□□□ -1.54
Chm-202ENSMUST00000113388 Lst1O08843 95 aa5.42□□□□□ -1.54
Chm-202ENSMUST00000113388 Rpl36aP83882 106 aaKnown RBP5.42□□□□□ -1.54
Chm-202ENSMUST00000113388 Gm5105Q8C6Y9 112 aa5.42□□□□□ -1.54
Chm-202ENSMUST00000113388 Wnk1P83741 2377 aa5.42□□□□□ -1.54
Chm-202ENSMUST00000113388 Col8a2P25318 699 aa5.42□□□□□ -1.54
Chm-202ENSMUST00000113388 Ighv1-69A0A0G2JFS5 117 aa5.41□□□□□ -1.54
Chm-202ENSMUST00000113388 CdsnQ7TPC1 561 aa5.41□□□□□ -1.54
Chm-202ENSMUST00000113388 Prpf8Q99PV0 2335 aaKnown RBP5.41□□□□□ -1.54
Chm-202ENSMUST00000113388 Ighv1-53A0A075B5W3 117 aa5.41□□□□□ -1.54
Chm-202ENSMUST00000113388 DscamQ9ERC8 2013 aa5.41□□□□□ -1.54
Chm-202ENSMUST00000113388 Igkv14-130A0A0G2JF45 117 aa5.41□□□□□ -1.54
Chm-202ENSMUST00000113388 Gm21060J3KMU4 56 aa5.41□□□□□ -1.54
Chm-202ENSMUST00000113388 P06328 117 aa5.41□□□□□ -1.54
Chm-202ENSMUST00000113388 Ighv1-23A0A0A6YVW3 117 aa5.4□□□□□ -1.54
Chm-202ENSMUST00000113388 Ighv1-77A0A0G2JGS9 117 aa5.4□□□□□ -1.54
Chm-202ENSMUST00000113388 Wfdc6bF6ULY1 148 aa5.4□□□□□ -1.54
Chm-202ENSMUST00000113388 CrygaP04345 174 aa5.4□□□□□ -1.54
Chm-202ENSMUST00000113388 Defb45Q3V490 66 aa5.4□□□□□ -1.54
Chm-202ENSMUST00000113388 FlnaQ8BTM8 2647 aaKnown RBP5.4□□□□□ -1.54
Chm-202ENSMUST00000113388 Ube2d4D3YUH6 135 aa5.4□□□□□ -1.54
Chm-202ENSMUST00000113388 Pglyrp1O88593 182 aa5.4□□□□□ -1.54
Chm-202ENSMUST00000113388 Ndufa12Q7TMF3 145 aaKnown RBP5.4□□□□□ -1.54
Chm-202ENSMUST00000113388 LystP97412 3788 aa5.4□□□□□ -1.54
Chm-202ENSMUST00000113388 Igkv5-37A0A140T8N4 115 aa5.4□□□□□ -1.55
Chm-202ENSMUST00000113388 Pde6hP61249 83 aa5.4□□□□□ -1.55
Chm-202ENSMUST00000113388 Rspo1Q9Z132 265 aa5.4□□□□□ -1.55
Chm-202ENSMUST00000113388 CicQ924A2 2510 aa5.4□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms