RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 BC025920Q3US60 128 aa10.58□□□□□ -0.72
Nup88-202ENSMUST00000108530 Rpl24Q8BP67 157 aaKnown RBP10.58□□□□□ -0.72
Nup88-202ENSMUST00000108530 Morn3Q8C5T4 241 aa10.58□□□□□ -0.72
Nup88-202ENSMUST00000108530 Cox17P56394 63 aa10.57□□□□□ -0.72
Nup88-202ENSMUST00000108530 Dand5Q76LW6 185 aa10.57□□□□□ -0.72
Nup88-202ENSMUST00000108530 Atp5lQ9CPQ8 103 aa10.57□□□□□ -0.72
Nup88-202ENSMUST00000108530 Gm36176A0A1W2P8D5 158 aa10.56□□□□□ -0.72
Nup88-202ENSMUST00000108530 Gtf2h5Q8K2X8 71 aa10.56□□□□□ -0.72
Nup88-202ENSMUST00000108530 Brd3osA0A1B0GRB6 84 aa10.55□□□□□ -0.72
Nup88-202ENSMUST00000108530 Bak1O08734 209 aa10.55□□□□□ -0.72
Nup88-202ENSMUST00000108530 Fgfbp3Q1HCM0 245 aa10.55□□□□□ -0.72
Nup88-202ENSMUST00000108530 Chac1Q8R3J5 223 aa10.55□□□□□ -0.72
Nup88-202ENSMUST00000108530 BatfO35284 125 aa10.55□□□□□ -0.72
Nup88-202ENSMUST00000108530 Gm1553Q66VB7 94 aa10.55□□□□□ -0.72
Nup88-202ENSMUST00000108530 Prss29Q99MS4 279 aa10.55□□□□□ -0.72
Nup88-202ENSMUST00000108530 Trav8-1A0A075B641 109 aa10.54□□□□□ -0.72
Nup88-202ENSMUST00000108530 GfyJ3KML8 504 aa10.54□□□□□ -0.72
Nup88-202ENSMUST00000108530 S100a8P27005 89 aa10.54□□□□□ -0.72
Nup88-202ENSMUST00000108530 Try10Q792Z1 246 aaKnown RBP10.54□□□□□ -0.72
Nup88-202ENSMUST00000108530 Fam240bJ3QMB3 78 aa10.54□□□□□ -0.72
Nup88-202ENSMUST00000108530 Trav9d-3A0A075B695 113 aa10.53□□□□□ -0.72
Nup88-202ENSMUST00000108530 Scgb1b24B1B0N6 92 aa10.53□□□□□ -0.72
Nup88-202ENSMUST00000108530 Nat8b-psE0CYC6 232 aa10.53□□□□□ -0.72
Nup88-202ENSMUST00000108530 Fam19a4Q7TPG5 135 aa10.53□□□□□ -0.72
Nup88-202ENSMUST00000108530 Phlda3Q9WV95 125 aa10.53□□□□□ -0.72
Nup88-202ENSMUST00000108530 Ighv8-12A0A0G2JDE1 119 aa10.52□□□□□ -0.73
Nup88-202ENSMUST00000108530 Higd1aQ9JLR9 95 aa10.52□□□□□ -0.73
Nup88-202ENSMUST00000108530 Notch1Q01705 2531 aa10.52□□□□□ -0.73
Nup88-202ENSMUST00000108530 Gm933J3QPC1 141 aa10.52□□□□□ -0.73
Nup88-202ENSMUST00000108530 Q5BN45 167 aa10.52□□□□□ -0.73
Nup88-202ENSMUST00000108530 PtprqP0C5E4 2300 aa10.51□□□□□ -0.73
Nup88-202ENSMUST00000108530 Igkv4-78A0A0A6YYE5 119 aa10.51□□□□□ -0.73
Nup88-202ENSMUST00000108530 Gm9887F6RFI0 207 aa10.51□□□□□ -0.73
Nup88-202ENSMUST00000108530 Ndufa1O35683 70 aa10.51□□□□□ -0.73
Nup88-202ENSMUST00000108530 Spink1P09036 80 aa10.51□□□□□ -0.73
Nup88-202ENSMUST00000108530 Cox11Q6P8I6 275 aa10.51□□□□□ -0.73
Nup88-202ENSMUST00000108530 Chchd7Q8K2Q5 85 aa10.51□□□□□ -0.73
Nup88-202ENSMUST00000108530 Hrct1Q9D6B9 109 aa10.51□□□□□ -0.73
Nup88-202ENSMUST00000108530 Gm7137J3QMW1 236 aa10.5□□□□□ -0.73
Nup88-202ENSMUST00000108530 Cks1brtQ3UNC9 96 aa10.5□□□□□ -0.73
Nup88-202ENSMUST00000108530 Leap2Q91V13 76 aa10.5□□□□□ -0.73
Nup88-202ENSMUST00000108530 Mustn1Q99JI1 82 aa10.5□□□□□ -0.73
Nup88-202ENSMUST00000108530 Ndufa3Q9CQ91 84 aa10.5□□□□□ -0.73
Nup88-202ENSMUST00000108530 Atxn7l1Q9CZ05 146 aa10.5□□□□□ -0.73
Nup88-202ENSMUST00000108530 Timm17aQ9Z0V8 171 aa10.5□□□□□ -0.73
Nup88-202ENSMUST00000108530 Trav7-2Q5R1I3 112 aa10.5□□□□□ -0.73
Nup88-202ENSMUST00000108530 Ankrd39Q9D2X0 183 aa10.5□□□□□ -0.73
Nup88-202ENSMUST00000108530 Tcrg-C3L7N479 172 aa10.49□□□□□ -0.73
Nup88-202ENSMUST00000108530 P03985 172 aa10.49□□□□□ -0.73
Nup88-202ENSMUST00000108530 Gm21370Q3T9V6 190 aa10.49□□□□□ -0.73
Nup88-202ENSMUST00000108530 Gpha2Q925Q5 128 aa10.49□□□□□ -0.73
Nup88-202ENSMUST00000108530 Pla2g1bQ9Z0Y2 146 aa10.49□□□□□ -0.73
Nup88-202ENSMUST00000108530 Esp24A8R0V6 68 aa10.48□□□□□ -0.73
Nup88-202ENSMUST00000108530 Hint1P70349 126 aaKnown RBP10.48□□□□□ -0.73
Nup88-202ENSMUST00000108530 Wfdc17Q5SSJ1 76 aa10.48□□□□□ -0.73
Nup88-202ENSMUST00000108530 Iglc1A0A0G2JE99 106 aa10.48□□□□□ -0.73
Nup88-202ENSMUST00000108530 Tmem238A9JSM3 176 aa10.48□□□□□ -0.73
Nup88-202ENSMUST00000108530 P01843 105 aa10.48□□□□□ -0.73
Nup88-202ENSMUST00000108530 Rpl36aP83882 106 aaKnown RBP10.48□□□□□ -0.73
Nup88-202ENSMUST00000108530 Q8R092 253 aa10.48□□□□□ -0.73
Nup88-202ENSMUST00000108530 Slamf6Q9ET39 351 aa10.48□□□□□ -0.73
Nup88-202ENSMUST00000108530 Tcf24V9GWT9 166 aa10.48□□□□□ -0.73
Nup88-202ENSMUST00000108530 Cox7a1P56392 80 aa10.47□□□□□ -0.73
Nup88-202ENSMUST00000108530 Spink13Q3UTS8 97 aa10.47□□□□□ -0.73
Nup88-202ENSMUST00000108530 HilpdaQ9JLS0 64 aa10.47□□□□□ -0.73
Nup88-202ENSMUST00000108530 VwfQ8CIZ8 2813 aa10.47□□□□□ -0.73
Nup88-202ENSMUST00000108530 Tcrg-C1A0A075B5Z0 172 aa10.47□□□□□ -0.73
Nup88-202ENSMUST00000108530 Gm44965A0A0N4SVR3 59 aa10.47□□□□□ -0.73
Nup88-202ENSMUST00000108530 Hbb-bsA8DUK4 147 aa10.47□□□□□ -0.73
Nup88-202ENSMUST00000108530 Esp4A8R0T8 117 aa10.47□□□□□ -0.73
Nup88-202ENSMUST00000108530 P01729 129 aa10.47□□□□□ -0.73
Nup88-202ENSMUST00000108530 Hbb-b1P02088 147 aa10.47□□□□□ -0.73
Nup88-202ENSMUST00000108530 Ifitm1Q9D103 106 aa10.47□□□□□ -0.73
Nup88-202ENSMUST00000108530 Pradc1Q9D9N8 188 aa10.47□□□□□ -0.73
Nup88-202ENSMUST00000108530 Fam240aJ3QNP9 97 aa10.46□□□□□ -0.73
Nup88-202ENSMUST00000108530 PolP10400 120 aa10.46□□□□□ -0.73
Nup88-202ENSMUST00000108530 March3Q8BRX9 218 aa10.46□□□□□ -0.73
Nup88-202ENSMUST00000108530 Ovol2Q8CIV7 274 aa10.46□□□□□ -0.73
Nup88-202ENSMUST00000108530 Klk5Q9D140 293 aa10.46□□□□□ -0.73
Nup88-202ENSMUST00000108530 D730001G18RikA0A087WQU7 115 aa10.46□□□□□ -0.74
Nup88-202ENSMUST00000108530 Gm45753A0A1C7CYU8 86 aa10.45□□□□□ -0.74
Nup88-202ENSMUST00000108530 Sh2d1aO88890 126 aa10.45□□□□□ -0.74
Nup88-202ENSMUST00000108530 P01837 106 aa10.45□□□□□ -0.74
Nup88-202ENSMUST00000108530 Cox7cP17665 63 aa10.45□□□□□ -0.74
Nup88-202ENSMUST00000108530 Ube2d3P61079 147 aa10.45□□□□□ -0.74
Nup88-202ENSMUST00000108530 Ube2d2P62838 147 aa10.45□□□□□ -0.74
Nup88-202ENSMUST00000108530 Defa3P28310 93 aa10.45□□□□□ -0.74
Nup88-202ENSMUST00000108530 Defa10P50708 93 aa10.45□□□□□ -0.74
Nup88-202ENSMUST00000108530 Defa15P50713 93 aa10.45□□□□□ -0.74
Nup88-202ENSMUST00000108530 Gm17472A0A075B683 117 aa10.44□□□□□ -0.74
Nup88-202ENSMUST00000108530 Igkv4-54A0A0G2JES9 117 aa10.44□□□□□ -0.74
Nup88-202ENSMUST00000108530 Gm42674D3YUT9 64 aa10.44□□□□□ -0.74
Nup88-202ENSMUST00000108530 Smim1P0C8K7 78 aa10.44□□□□□ -0.74
Nup88-202ENSMUST00000108530 Foxi2Q3I5G5 311 aa10.44□□□□□ -0.74
Nup88-202ENSMUST00000108530 Tal2Q62282 108 aa10.44□□□□□ -0.74
Nup88-202ENSMUST00000108530 Znf740Q6NZQ6 180 aa10.44□□□□□ -0.74
Nup88-202ENSMUST00000108530 Rbmxl2Q9DAE2 385 aaKnown RBP10.44□□□□□ -0.74
Nup88-202ENSMUST00000108530 Igsf10Q3V1M1 2594 aa10.43□□□□□ -0.74
Nup88-202ENSMUST00000108530 Ighv1-11A0A0A6YWI9 117 aa10.43□□□□□ -0.74
Nup88-202ENSMUST00000108530 Gm45785A0A1B0GT05 94 aa10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms