RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Fam240aJ3QNP9 97 aa16.07■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Gm9887F6RFI0 207 aa16.06■□□□□ 0.16
Scn1b-201ENSMUST00000098548 FcorP0DJI6 106 aa16.06■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Ca1P13634 261 aa16.06■□□□□ 0.16
Scn1b-201ENSMUST00000098548 P84751 237 aa16.06■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Tmem97Q8VD00 176 aa16.06■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Pradc1Q9D9N8 188 aa16.06■□□□□ 0.16
Scn1b-201ENSMUST00000098548 D730001G18RikA0A087WQU7 115 aa16.05■□□□□ 0.16
Scn1b-201ENSMUST00000098548 HampQ9EQ21 83 aa16.05■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Muc6Q80T03 2850 aa16.05■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Nat8b-psE0CYC6 232 aa16.04■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Ndufa1O35683 70 aa16.04■□□□□ 0.16
Scn1b-201ENSMUST00000098548 P18527 97 aa16.04■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Gm21748Q3UE70 102 aa16.04■□□□□ 0.16
Scn1b-201ENSMUST00000098548 CtrlQ9ER05 264 aa16.04■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Pkd1l1Q8R526 2615 aa16.04■□□□□ 0.16
Scn1b-201ENSMUST00000098548 BC106179Q8C9L1 186 aa16.04■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Gm10322F7D7I4 111 aa16.03■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Gm21693J3QK27 380 aa16.03■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Gm21370Q3T9V6 190 aa16.03■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Ube2d3P61079 147 aa16.02■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Ube2d2P62838 147 aa16.02■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Tenm2Q9WTS5 2764 aa16.02■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Gm45521A0A1B0GRK0 198 aa16.01■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Shisa2Q8QZV2 295 aa16.01■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Mustn1Q99JI1 82 aa16.01■□□□□ 0.15
Scn1b-201ENSMUST00000098548 EsdQ9R0P3 282 aa16.01■□□□□ 0.15
Scn1b-201ENSMUST00000098548 P01837 106 aa16■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Q9D727 114 aa16■□□□□ 0.15
Scn1b-201ENSMUST00000098548 OdaphJ3QNT8 126 aa16■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Cks1brtQ3UNC9 96 aa16■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Gm1553Q66VB7 94 aa16■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Leap2Q91V13 76 aa16■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Sec11aQ9R0P6 179 aa16■□□□□ 0.15
Scn1b-201ENSMUST00000098548 S100a8P27005 89 aa15.99■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Gpha2Q925Q5 128 aa15.99■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Ppp1r32Q148A4 427 aa15.98■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Fam19a4Q7TPG5 135 aa15.98■□□□□ 0.15
Scn1b-201ENSMUST00000098548 BC048562Q80ZQ7 204 aa15.98■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Trav13d-1A0A075B606 110 aa15.97■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Brd3osA0A1B0GRB6 84 aa15.97■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Bak1O08734 209 aa15.97■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Ighv1-72P01751 139 aa15.97■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Isg15Q64339 161 aaKnown RBP15.97■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Gm43218A0A0G2JGT0 114 aa15.96■□□□□ 0.15
Scn1b-201ENSMUST00000098548 Ly6gP35461 111 aa15.96■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Clec4b2Q67DU8 208 aa15.96■□□□□ 0.14
Scn1b-201ENSMUST00000098548 PpdpfQ9CR37 115 aa15.96■□□□□ 0.14
Scn1b-201ENSMUST00000098548 LeprotO89013 131 aa15.95■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Foxc1Q61572 553 aa15.95■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Trav4n-4A0A075B615 110 aa15.94■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Ighv6-7A0A0A6YWU3 119 aa15.94■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Igkv2-137A0A0B4J1H6 120 aa15.94■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Spink4O35679 86 aa15.94■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Sslp1Q3UN54 99 aa15.94■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Tal2Q62282 108 aa15.94■□□□□ 0.14
Scn1b-201ENSMUST00000098548 MrapQ9D159 127 aa15.94■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Gnb1lQ9EQ15 326 aa15.94■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Igkv4-78A0A0A6YYE5 119 aa15.93■□□□□ 0.14
Scn1b-201ENSMUST00000098548 3110070M22RikQ9DAQ7 118 aa15.93■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Hnrnpa3Q8BG05 379 aaKnown RBP15.92■□□□□ 0.14
Scn1b-201ENSMUST00000098548 P01745 121 aa15.92■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Q9DAA3 117 aa15.92■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Trav9d-3A0A075B695 113 aa15.91■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Ighv1-59A0A0A6YXE0 117 aa15.91■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Defa30E9QPZ2 93 aa15.91■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Vamp8O70404 101 aa15.91■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Gm9747Q810H1 104 aa15.91■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Gatd1Q8BFQ8 220 aa15.91■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Gm10295Q8CCF3 114 aa15.91■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Mpv17l2Q8VIK2 200 aa15.91■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Ankrd39Q9D2X0 183 aa15.9■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Plac1Q9JI83 173 aa15.9■□□□□ 0.14
Scn1b-201ENSMUST00000098548 Dnah3Q8BW94 4083 aa15.89■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Gm28044L7N1X0 119 aa15.89■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Vmn1r197Q8R265 298 aa15.89■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Igkv4-72A0A0B4J1I4 117 aa15.88■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Gm45717A0A1B0GT68 152 aa15.88■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Fgf6P21658 208 aa15.88■□□□□ 0.13
Scn1b-201ENSMUST00000098548 AponG3X9D6 251 aa15.87■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Dad1P61804 113 aa15.87■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Erg28Q9ERY9 140 aa15.87■□□□□ 0.13
Scn1b-201ENSMUST00000098548 PrkdcP97313 4128 aa15.87■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Ighv1-49A0A0A6YWX2 117 aa15.87■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Gm45785A0A1B0GT05 94 aa15.87■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Smim13E9Q942 88 aa15.87■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Defa6P50704 93 aa15.87■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Psors1c2Q80ZC9 134 aa15.87■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Il1f10Q8R459 152 aa15.87■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Higd2aQ9CQJ1 106 aa15.87■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Dpm2Q9Z324 84 aa15.87■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Ifitm10Q8BR26 201 aa15.86■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Defa22Q8C1N8 93 aa15.86■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Tm4sf20Q9CQY8 226 aa15.86■□□□□ 0.13
Scn1b-201ENSMUST00000098548 CrygaP04345 174 aa15.85■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Foxi2Q3I5G5 311 aa15.85■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Tax1bp3Q9DBG9 124 aa15.84■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Igkv4-61A0A0G2JH00 117 aa15.83■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Hsbp1l1B2RXB2 72 aa15.83■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Atp5g3P56384 141 aa15.83■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms