RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 P01728 117 aa10.72□□□□□ -0.69
Col2a1-202ENSMUST00000088355 B9d2Q3UK10 175 aa10.72□□□□□ -0.69
Col2a1-202ENSMUST00000088355 Mrpl35Q9CQL6 188 aa10.72□□□□□ -0.69
Col2a1-202ENSMUST00000088355 P01674 108 aa10.71□□□□□ -0.69
Col2a1-202ENSMUST00000088355 P01747 120 aa10.71□□□□□ -0.69
Col2a1-202ENSMUST00000088355 Trav13-4-dv7A0A075B6C2 110 aa10.71□□□□□ -0.69
Col2a1-202ENSMUST00000088355 Trav4-3A0A0B4J1K1 110 aa10.71□□□□□ -0.69
Col2a1-202ENSMUST00000088355 Igkv4-58A0A0G2JGI6 119 aa10.71□□□□□ -0.69
Col2a1-202ENSMUST00000088355 Sh2d1aO88890 126 aa10.71□□□□□ -0.69
Col2a1-202ENSMUST00000088355 NpyP57774 97 aa10.71□□□□□ -0.69
Col2a1-202ENSMUST00000088355 Gm8439G3UWA7 96 aa10.71□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Eif4ebp1Q60876 117 aa10.71□□□□□ -0.7
Col2a1-202ENSMUST00000088355 U90926O08546 118 aa10.7□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Ighv1-5A0A0A6YWG2 117 aa10.7□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Defa27F2Z403 93 aa10.7□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Q9D8Q6 235 aa10.7□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Gm42674D3YUT9 64 aa10.7□□□□□ -0.7
Col2a1-202ENSMUST00000088355 A130051J06RikQ8CAU1 227 aa10.7□□□□□ -0.7
Col2a1-202ENSMUST00000088355 SetxA2AKX3 2646 aa10.69□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Ighv1-85A0A075B5Y6 117 aa10.69□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Sigmar1O55242 223 aa10.69□□□□□ -0.7
Col2a1-202ENSMUST00000088355 MifP34884 115 aaKnown RBP10.69□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Tns1E9Q0S6 1888 aaKnown RBP10.69□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Trav13-1A0A075B644 110 aa10.68□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Ebi3O35228 228 aa10.68□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Ighv1-63A0A075B5X2 117 aa10.68□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Trav7-6A0A075B640 112 aa10.68□□□□□ -0.7
Col2a1-202ENSMUST00000088355 B230359F08RikA0A0B4J1K3 109 aa10.68□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Znf239P24399 201 aa10.67□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Ovol3D3YYM0 189 aa10.67□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Defa21Q8C1P2 93 aa10.67□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Cox7cP17665 63 aa10.67□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Gm17472A0A075B683 117 aa10.66□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Gm9767G3X930 207 aa10.66□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Gm10251J3QPM5 127 aa10.66□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Fhl2O70433 279 aa10.66□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Pcp4P63054 62 aa10.66□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Smrp1Q2MH31 260 aa10.66□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Bahcc1Q3UHR0 2643 aa10.65□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Gm3285A0A1W2P7U0 201 aa10.65□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Snai3Q9QY31 287 aa10.65□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Fam240bJ3QMB3 78 aa10.65□□□□□ -0.7
Col2a1-202ENSMUST00000088355 Iglc1A0A0G2JE99 106 aa10.64□□□□□ -0.71
Col2a1-202ENSMUST00000088355 1700056E22RikF7CNM6 234 aa10.64□□□□□ -0.71
Col2a1-202ENSMUST00000088355 P01843 105 aa10.64□□□□□ -0.71
Col2a1-202ENSMUST00000088355 1520401A03RikA0A0J9YVH6 598 aa10.64□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Ramp1Q9WTJ5 148 aa10.64□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Trav9n-4A0A075B631 113 aa10.64□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Fgf6P21658 208 aa10.64□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Igkv8-18A0A0B4J1J3 123 aa10.64□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Igkv3-10A0A0G2JGN0 119 aa10.64□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Trav13n-2A0A0G2JF93 110 aa10.63□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Pet100P0DJE0 76 aa10.63□□□□□ -0.71
Col2a1-202ENSMUST00000088355 MtorQ9JLN9 2549 aa10.63□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Klk12B2RVZ0 247 aa10.63□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Rbmy1bQ60990 380 aa10.63□□□□□ -0.71
Col2a1-202ENSMUST00000088355 1700010B08RikQ9DAI7 102 aa10.62□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Ube2aQ9Z255 152 aa10.62□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Gm17577J3QNF7 156 aa10.62□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Fgfbp3Q1HCM0 245 aa10.62□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Ep400Q8CHI8 3072 aaKnown RBP10.62□□□□□ -0.71
Col2a1-202ENSMUST00000088355 PrlhG3UWC3 86 aa10.62□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Gm10295Q8CCF3 114 aa10.62□□□□□ -0.71
Col2a1-202ENSMUST00000088355 BB014433Q8C5R5 389 aa10.61□□□□□ -0.71
Col2a1-202ENSMUST00000088355 CrygfQ9CXV3 174 aa10.6□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Hrct1Q9D6B9 109 aa10.6□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Cryba4Q9JJV0 196 aa10.6□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Igkv2-109A0A075B5K6 120 aa10.6□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Ufsp1Q9CZP0 217 aa10.6□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Chchd7Q8K2Q5 85 aa10.59□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Ighv1-59A0A0A6YXE0 117 aa10.59□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Igkv3-5A0A140T8M6 119 aa10.59□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Rpl18aP62717 176 aaKnown RBP10.59□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Gm12689Q8BQU9 117 aa10.59□□□□□ -0.71
Col2a1-202ENSMUST00000088355 Ighv2-6A0A075B6A7 116 aa10.58□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Fam222aQ6PGH4 453 aa10.58□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Cd27P41272 250 aa10.58□□□□□ -0.72
Col2a1-202ENSMUST00000088355 C1qcQ02105 246 aa10.58□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Adamts20P59511 1906 aa10.58□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Gm42715A0A087WP63 3095 aaKnown RBP10.58□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Ighv1-62-2A0A0A6YXZ4 119 aa10.57□□□□□ -0.72
Col2a1-202ENSMUST00000088355 P0C913 63 aa10.57□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Defb10Q8R2I8 73 aa10.57□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Igkv1-35A0A0G2JDE5 120 aa10.57□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Gm12353A2AGJ4 60 aa10.56□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Gm44965A0A0N4SVR3 59 aa10.56□□□□□ -0.72
Col2a1-202ENSMUST00000088355 FcorP0DJI6 106 aa10.56□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Gm5629P06327 117 aa10.55□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Shisa2Q8QZV2 295 aa10.55□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Lrp4Q8VI56 1905 aa10.55□□□□□ -0.72
Col2a1-202ENSMUST00000088355 PscaP57096 123 aa10.55□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Cfc1P97766 202 aa10.55□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Triap1Q9D8Z2 76 aa10.55□□□□□ -0.72
Col2a1-202ENSMUST00000088355 AngP21570 145 aa10.54□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Ighv3-3A0A0A6YWL2 116 aa10.54□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Ighv8-12A0A0G2JDE1 119 aa10.54□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Acyp1P56376 99 aa10.53□□□□□ -0.72
Col2a1-202ENSMUST00000088355 PcntP48725 2898 aa10.53□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Gm37389A0A0A6YW05 95 aa10.53□□□□□ -0.72
Col2a1-202ENSMUST00000088355 Gm9922Q8C3P1 144 aa10.52□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms