RNA–Protein interactions for RNA: ENSMUST00000078752.9

Casc4-201, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 4,215 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-201ENSMUST00000078752 Igkv4-57-1A0A075B5M4 119 aa11.33□□□□□ -0.6
Casc4-201ENSMUST00000078752 Vpreb2P13373 142 aa11.33□□□□□ -0.6
Casc4-201ENSMUST00000078752 Chd7A2AJK6 2986 aaKnown RBP11.33□□□□□ -0.6
Casc4-201ENSMUST00000078752 Kiaa1549Q68FD9 1940 aa11.33□□□□□ -0.6
Casc4-201ENSMUST00000078752 Ube2e2Q91W82 201 aa11.33□□□□□ -0.6
Casc4-201ENSMUST00000078752 Pgpep1lQ9CWB5 130 aa11.33□□□□□ -0.6
Casc4-201ENSMUST00000078752 AW146154Q3TPQ7 468 aa11.33□□□□□ -0.6
Casc4-201ENSMUST00000078752 Lrp4Q8VI56 1905 aa11.32□□□□□ -0.6
Casc4-201ENSMUST00000078752 Frem2Q6NVD0 3160 aa11.32□□□□□ -0.6
Casc4-201ENSMUST00000078752 Trav13-1A0A075B644 110 aa11.32□□□□□ -0.6
Casc4-201ENSMUST00000078752 Gm19935A0A1B0GSF9 52 aa11.32□□□□□ -0.6
Casc4-201ENSMUST00000078752 Cela2aP05208 271 aa11.32□□□□□ -0.6
Casc4-201ENSMUST00000078752 A130051J06RikQ8CAU1 227 aa11.32□□□□□ -0.6
Casc4-201ENSMUST00000078752 P06328 117 aa11.31□□□□□ -0.6
Casc4-201ENSMUST00000078752 TeppQ6IMH0 216 aa11.31□□□□□ -0.6
Casc4-201ENSMUST00000078752 Timm17bQ9Z0V7 172 aa11.31□□□□□ -0.6
Casc4-201ENSMUST00000078752 Ighv1-74A0A0G2JGK2 117 aa11.3□□□□□ -0.6
Casc4-201ENSMUST00000078752 B230359F08RikA0A0B4J1K3 109 aa11.3□□□□□ -0.6
Casc4-201ENSMUST00000078752 Gm15217A2CG07 155 aa11.3□□□□□ -0.6
Casc4-201ENSMUST00000078752 Gm7257D3YX25 99 aa11.3□□□□□ -0.6
Casc4-201ENSMUST00000078752 P01750 117 aa11.3□□□□□ -0.6
Casc4-201ENSMUST00000078752 Rnf152Q8BG47 203 aa11.3□□□□□ -0.6
Casc4-201ENSMUST00000078752 Fhl1P97447 280 aaKnown RBP11.3□□□□□ -0.6
Casc4-201ENSMUST00000078752 Ifitm1Q9D103 106 aa11.29□□□□□ -0.6
Casc4-201ENSMUST00000078752 Zfp462B1AWL2 2495 aaKnown RBP11.29□□□□□ -0.6
Casc4-201ENSMUST00000078752 Klk12B2RVZ0 247 aa11.29□□□□□ -0.6
Casc4-201ENSMUST00000078752 P01753 117 aa11.29□□□□□ -0.6
Casc4-201ENSMUST00000078752 A830031A19RikQ8BNT5 113 aa11.29□□□□□ -0.6
Casc4-201ENSMUST00000078752 Sec61gP60060 68 aa11.28□□□□□ -0.6
Casc4-201ENSMUST00000078752 Inafm2A0A1L1STD6 152 aa11.28□□□□□ -0.6
Casc4-201ENSMUST00000078752 Pou2af1Q64693 256 aa11.28□□□□□ -0.6
Casc4-201ENSMUST00000078752 Trav14-1A0A0G2JF94 121 aa11.28□□□□□ -0.6
Casc4-201ENSMUST00000078752 Igkv4-61A0A0G2JH00 117 aa11.28□□□□□ -0.6
Casc4-201ENSMUST00000078752 Prh1P05142 261 aa11.28□□□□□ -0.6
Casc4-201ENSMUST00000078752 Defb45Q3V490 66 aa11.28□□□□□ -0.6
Casc4-201ENSMUST00000078752 Gm9958Q8C9U4 106 aa11.28□□□□□ -0.6
Casc4-201ENSMUST00000078752 Ighv1-50A0A075B5W1 117 aa11.27□□□□□ -0.6
Casc4-201ENSMUST00000078752 1700010B08RikQ9DAI7 102 aa11.27□□□□□ -0.6
Casc4-201ENSMUST00000078752 Ighv1-64A0A075B5X3 117 aa11.27□□□□□ -0.61
Casc4-201ENSMUST00000078752 SbsponQ3UPR9 264 aa11.27□□□□□ -0.61
Casc4-201ENSMUST00000078752 Gm26566Q8CAC1 153 aa11.27□□□□□ -0.61
Casc4-201ENSMUST00000078752 Bod1lE9Q6J5 3032 aa11.27□□□□□ -0.61
Casc4-201ENSMUST00000078752 PtprqP0C5E4 2300 aa11.26□□□□□ -0.61
Casc4-201ENSMUST00000078752 Ighv3-4A0A0A6YXF1 117 aa11.26□□□□□ -0.61
Casc4-201ENSMUST00000078752 Map1aQ9QYR6 2776 aa11.26□□□□□ -0.61
Casc4-201ENSMUST00000078752 Tcte2E9PY37 120 aa11.26□□□□□ -0.61
Casc4-201ENSMUST00000078752 P01748 117 aa11.26□□□□□ -0.61
Casc4-201ENSMUST00000078752 P84751 237 aa11.26□□□□□ -0.61
Casc4-201ENSMUST00000078752 Mapk1ip1lQ8BH93 242 aa11.26□□□□□ -0.61
Casc4-201ENSMUST00000078752 Ormdl1Q921I0 153 aa11.26□□□□□ -0.61
Casc4-201ENSMUST00000078752 Ighv13-2A0A0A6YWN3 119 aa11.26□□□□□ -0.61
Casc4-201ENSMUST00000078752 Pcsk5Q04592 1877 aa11.26□□□□□ -0.61
Casc4-201ENSMUST00000078752 Igkv4-59A0A0B4J1I8 117 aa11.25□□□□□ -0.61
Casc4-201ENSMUST00000078752 Prrc2cQ3TLH4 2846 aaKnown RBP11.25□□□□□ -0.61
Casc4-201ENSMUST00000078752 9430015G10RikA2ASP7 199 aa11.25□□□□□ -0.61
Casc4-201ENSMUST00000078752 Gm26661M0QWV4 156 aa11.25□□□□□ -0.61
Casc4-201ENSMUST00000078752 Gm17472A0A075B683 117 aa11.25□□□□□ -0.61
Casc4-201ENSMUST00000078752 Trav13-4-dv7A0A075B6C2 110 aa11.25□□□□□ -0.61
Casc4-201ENSMUST00000078752 Igkv4-57A0A0A6YYE7 117 aa11.24□□□□□ -0.61
Casc4-201ENSMUST00000078752 B430305J03RikQ8BQQ8 176 aa11.24□□□□□ -0.61
Casc4-201ENSMUST00000078752 Igkv4-72A0A0B4J1I4 117 aa11.24□□□□□ -0.61
Casc4-201ENSMUST00000078752 Spink4O35679 86 aa11.24□□□□□ -0.61
Casc4-201ENSMUST00000078752 Defb26Q30KN7 186 aa11.24□□□□□ -0.61
Casc4-201ENSMUST00000078752 Cxcl14Q9WUQ5 99 aa11.24□□□□□ -0.61
Casc4-201ENSMUST00000078752 Acyp1P56376 99 aa11.24□□□□□ -0.61
Casc4-201ENSMUST00000078752 Igkv4-54A0A0G2JES9 117 aa11.24□□□□□ -0.61
Casc4-201ENSMUST00000078752 Trav9n-2A0A0G2JDP3 113 aa11.23□□□□□ -0.61
Casc4-201ENSMUST00000078752 Mrps21P58059 87 aa11.23□□□□□ -0.61
Casc4-201ENSMUST00000078752 Unc79Q0KK59 2596 aa11.23□□□□□ -0.61
Casc4-201ENSMUST00000078752 Trav13-2A0A075B649 110 aa11.23□□□□□ -0.61
Casc4-201ENSMUST00000078752 Gm815Q3UWS2 115 aa11.23□□□□□ -0.61
Casc4-201ENSMUST00000078752 Sfta2E9PXB6 77 aa11.23□□□□□ -0.61
Casc4-201ENSMUST00000078752 Smr3aQ61900 147 aa11.23□□□□□ -0.61
Casc4-201ENSMUST00000078752 Igkv4-69A0A0B4J1I6 116 aa11.22□□□□□ -0.61
Casc4-201ENSMUST00000078752 Igkv8-16A0A0G2JDG9 121 aa11.22□□□□□ -0.61
Casc4-201ENSMUST00000078752 Tnrc18Q80WC3 2878 aa11.22□□□□□ -0.61
Casc4-201ENSMUST00000078752 Ighv1-72P01751 139 aa11.22□□□□□ -0.61
Casc4-201ENSMUST00000078752 Gm5464Q3UY29 175 aa11.22□□□□□ -0.61
Casc4-201ENSMUST00000078752 NrgnP60761 78 aa11.22□□□□□ -0.61
Casc4-201ENSMUST00000078752 Szt2A2A9C3 3431 aa11.21□□□□□ -0.61
Casc4-201ENSMUST00000078752 FryE9Q8I9 3020 aa11.21□□□□□ -0.61
Casc4-201ENSMUST00000078752 Gm10553J3QPF1 123 aa11.21□□□□□ -0.61
Casc4-201ENSMUST00000078752 Prop1P97458 223 aa11.21□□□□□ -0.61
Casc4-201ENSMUST00000078752 BaalcQ8VHV1 145 aa11.21□□□□□ -0.61
Casc4-201ENSMUST00000078752 Gm10300Q8C8P7 189 aa11.21□□□□□ -0.62
Casc4-201ENSMUST00000078752 Gm9970F6ZED4 185 aa11.2□□□□□ -0.62
Casc4-201ENSMUST00000078752 Reg3dQ9QUS9 175 aa11.2□□□□□ -0.62
Casc4-201ENSMUST00000078752 Trbv13-2A0A140T8N6 113 aa11.2□□□□□ -0.62
Casc4-201ENSMUST00000078752 AI854703Q8BIN3 203 aa11.2□□□□□ -0.62
Casc4-201ENSMUST00000078752 Rpl39lQ9CQD0 51 aa11.2□□□□□ -0.62
Casc4-201ENSMUST00000078752 Polr2kQ63871 58 aa11.2□□□□□ -0.62
Casc4-201ENSMUST00000078752 Rev3lQ61493 3122 aa11.19□□□□□ -0.62
Casc4-201ENSMUST00000078752 A730015C16RikQ8C992 119 aa11.19□□□□□ -0.62
Casc4-201ENSMUST00000078752 Wisp2Q9Z0G4 251 aa11.19□□□□□ -0.62
Casc4-201ENSMUST00000078752 AspmQ8CJ27 3122 aa11.19□□□□□ -0.62
Casc4-201ENSMUST00000078752 Gm5878E9PUB3 99 aa11.19□□□□□ -0.62
Casc4-201ENSMUST00000078752 P01823 113 aa11.19□□□□□ -0.62
Casc4-201ENSMUST00000078752 Ighv1-4A0A075B5T4 117 aa11.18□□□□□ -0.62
Casc4-201ENSMUST00000078752 ScxQ64124 207 aa11.18□□□□□ -0.62
Casc4-201ENSMUST00000078752 Fam19a1Q7TPG8 133 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 67 ms