RNA–Protein interactions for RNA: ENSMUST00000075084.4

Trim58-201, Transcript of E3 ubiquitin-protein ligase TRIM58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim58, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58-201ENSMUST00000075084 Cox6b1P56391 86 aaKnown RBP13.18□□□□□ -0.3
Trim58-201ENSMUST00000075084 Gm45753A0A1C7CYU8 86 aa13.17□□□□□ -0.3
Trim58-201ENSMUST00000075084 Cd33Q63994 403 aa13.17□□□□□ -0.3
Trim58-201ENSMUST00000075084 Phlda3Q9WV95 125 aa13.17□□□□□ -0.3
Trim58-201ENSMUST00000075084 LeprotO89013 131 aa13.17□□□□□ -0.3
Trim58-201ENSMUST00000075084 P84751 237 aa13.17□□□□□ -0.3
Trim58-201ENSMUST00000075084 MturnQ8CGA4 131 aa13.17□□□□□ -0.3
Trim58-201ENSMUST00000075084 Nop10Q9CQS2 64 aa13.17□□□□□ -0.3
Trim58-201ENSMUST00000075084 Col6a5A6H584 2640 aa13.16□□□□□ -0.3
Trim58-201ENSMUST00000075084 Mpv17l2Q8VIK2 200 aa13.16□□□□□ -0.3
Trim58-201ENSMUST00000075084 Tnfrsf23Q9ER63 176 aa13.16□□□□□ -0.3
Trim58-201ENSMUST00000075084 Igkv4-78A0A0A6YYE5 119 aa13.15□□□□□ -0.3
Trim58-201ENSMUST00000075084 Krtap16-1A2A5X5 502 aa13.15□□□□□ -0.3
Trim58-201ENSMUST00000075084 Nhlrc1Q8BR37 401 aa13.15□□□□□ -0.3
Trim58-201ENSMUST00000075084 Notch2O35516 2470 aa13.15□□□□□ -0.3
Trim58-201ENSMUST00000075084 Ighv1-11A0A0A6YWI9 117 aa13.14□□□□□ -0.31
Trim58-201ENSMUST00000075084 Dpm2Q9Z324 84 aa13.14□□□□□ -0.31
Trim58-201ENSMUST00000075084 Notch3Q61982 2318 aa13.14□□□□□ -0.31
Trim58-201ENSMUST00000075084 Trav4n-4A0A075B615 110 aa13.14□□□□□ -0.31
Trim58-201ENSMUST00000075084 Gm17472A0A075B683 117 aa13.14□□□□□ -0.31
Trim58-201ENSMUST00000075084 Esp24A8R0V6 68 aa13.14□□□□□ -0.31
Trim58-201ENSMUST00000075084 3110070M22RikQ9DAQ7 118 aa13.14□□□□□ -0.31
Trim58-201ENSMUST00000075084 Iglc1A0A0G2JE99 106 aa13.13□□□□□ -0.31
Trim58-201ENSMUST00000075084 P01843 105 aa13.13□□□□□ -0.31
Trim58-201ENSMUST00000075084 Chchd7Q8K2Q5 85 aa13.13□□□□□ -0.31
Trim58-201ENSMUST00000075084 Esm1Q9QYY7 184 aa13.13□□□□□ -0.31
Trim58-201ENSMUST00000075084 Gm26727M0QWT1 121 aa13.12□□□□□ -0.31
Trim58-201ENSMUST00000075084 Cox7cP17665 63 aa13.12□□□□□ -0.31
Trim58-201ENSMUST00000075084 Defa13P50711 93 aa13.12□□□□□ -0.31
Trim58-201ENSMUST00000075084 Cited1P97769 203 aa13.12□□□□□ -0.31
Trim58-201ENSMUST00000075084 S100a8P27005 89 aa13.11□□□□□ -0.31
Trim58-201ENSMUST00000075084 Trav7-2Q5R1I3 112 aa13.11□□□□□ -0.31
Trim58-201ENSMUST00000075084 Eif4ebp1Q60876 117 aa13.11□□□□□ -0.31
Trim58-201ENSMUST00000075084 Gng7Q61016 68 aa13.11□□□□□ -0.31
Trim58-201ENSMUST00000075084 Klk5Q9D140 293 aa13.11□□□□□ -0.31
Trim58-201ENSMUST00000075084 Triap1Q9D8Z2 76 aa13.1□□□□□ -0.31
Trim58-201ENSMUST00000075084 Rpl36aP83882 106 aaKnown RBP13.1□□□□□ -0.31
Trim58-201ENSMUST00000075084 Gm9747Q810H1 104 aa13.1□□□□□ -0.31
Trim58-201ENSMUST00000075084 Cfap126Q6P8X9 189 aa13.09□□□□□ -0.31
Trim58-201ENSMUST00000075084 A830031A19RikQ8BNT5 113 aa13.09□□□□□ -0.31
Trim58-201ENSMUST00000075084 Tm4sf20Q9CQY8 226 aa13.09□□□□□ -0.31
Trim58-201ENSMUST00000075084 Gm9887F6RFI0 207 aa13.08□□□□□ -0.31
Trim58-201ENSMUST00000075084 Ighv1-72P01751 139 aa13.08□□□□□ -0.31
Trim58-201ENSMUST00000075084 Gm10322F7D7I4 111 aa13.08□□□□□ -0.32
Trim58-201ENSMUST00000075084 Dmrt3Q80WT2 476 aa13.08□□□□□ -0.32
Trim58-201ENSMUST00000075084 GfyJ3KML8 504 aa13.07□□□□□ -0.32
Trim58-201ENSMUST00000075084 Gm26602M0QWA4 95 aa13.07□□□□□ -0.32
Trim58-201ENSMUST00000075084 Hivep3A2A884 2348 aa13.07□□□□□ -0.32
Trim58-201ENSMUST00000075084 Gm9513B3GLJ6 99 aa13.07□□□□□ -0.32
Trim58-201ENSMUST00000075084 Gm933J3QPC1 141 aa13.07□□□□□ -0.32
Trim58-201ENSMUST00000075084 Mtatp8P03930 67 aa13.07□□□□□ -0.32
Trim58-201ENSMUST00000075084 Ube2d3P61079 147 aa13.07□□□□□ -0.32
Trim58-201ENSMUST00000075084 Ube2d2P62838 147 aa13.07□□□□□ -0.32
Trim58-201ENSMUST00000075084 Vps25Q9CQ80 176 aa13.07□□□□□ -0.32
Trim58-201ENSMUST00000075084 Atxn7l1Q9CZ05 146 aa13.07□□□□□ -0.32
Trim58-201ENSMUST00000075084 Rbmxl2Q9DAE2 385 aaKnown RBP13.07□□□□□ -0.32
Trim58-201ENSMUST00000075084 Mfap4Q9D1H9 257 aa13.06□□□□□ -0.32
Trim58-201ENSMUST00000075084 Esp4A8R0T8 117 aa13.05□□□□□ -0.32
Trim58-201ENSMUST00000075084 Brwd1Q921C3 2304 aa13.05□□□□□ -0.32
Trim58-201ENSMUST00000075084 Gm45717A0A1B0GT68 152 aa13.05□□□□□ -0.32
Trim58-201ENSMUST00000075084 Smr3aQ61900 147 aa13.05□□□□□ -0.32
Trim58-201ENSMUST00000075084 Gm21748Q3UE70 102 aa13.04□□□□□ -0.32
Trim58-201ENSMUST00000075084 Gm35549A0A0N4SUS7 141 aa13.04□□□□□ -0.32
Trim58-201ENSMUST00000075084 Gm45785A0A1B0GT05 94 aa13.04□□□□□ -0.32
Trim58-201ENSMUST00000075084 Hsbp1l1B2RXB2 72 aa13.04□□□□□ -0.32
Trim58-201ENSMUST00000075084 PolP10400 120 aa13.04□□□□□ -0.32
Trim58-201ENSMUST00000075084 Ube2d1P61080 147 aaKnown RBP13.04□□□□□ -0.32
Trim58-201ENSMUST00000075084 Gpha2Q925Q5 128 aa13.04□□□□□ -0.32
Trim58-201ENSMUST00000075084 Trav9d-3A0A075B695 113 aa13.03□□□□□ -0.32
Trim58-201ENSMUST00000075084 Gemin7Q9CWY4 129 aa13.03□□□□□ -0.32
Trim58-201ENSMUST00000075084 P01729 129 aa13.03□□□□□ -0.32
Trim58-201ENSMUST00000075084 P01811 117 aa13.03□□□□□ -0.32
Trim58-201ENSMUST00000075084 Spink1P09036 80 aa13.03□□□□□ -0.32
Trim58-201ENSMUST00000075084 BC106179Q8C9L1 186 aa13.03□□□□□ -0.32
Trim58-201ENSMUST00000075084 Ndufa3Q9CQ91 84 aa13.03□□□□□ -0.32
Trim58-201ENSMUST00000075084 Lect2O88803 151 aa13.02□□□□□ -0.33
Trim58-201ENSMUST00000075084 Gatd1Q8BFQ8 220 aa13.02□□□□□ -0.33
Trim58-201ENSMUST00000075084 Ifitm10Q8BR26 201 aa13.02□□□□□ -0.33
Trim58-201ENSMUST00000075084 Defb10Q8R2I8 73 aa13.02□□□□□ -0.33
Trim58-201ENSMUST00000075084 Srsf9Q9D0B0 222 aaKnown RBP13.02□□□□□ -0.33
Trim58-201ENSMUST00000075084 HilpdaQ9JLS0 64 aa13.02□□□□□ -0.33
Trim58-201ENSMUST00000075084 Tmem101Q91VP7 257 aa13.01□□□□□ -0.33
Trim58-201ENSMUST00000075084 Rbmy1bQ60990 380 aa13.01□□□□□ -0.33
Trim58-201ENSMUST00000075084 Gm6812B1AXU1 112 aa13□□□□□ -0.33
Trim58-201ENSMUST00000075084 Pgpep1Q9ESW8 209 aa13□□□□□ -0.33
Trim58-201ENSMUST00000075084 C920008G01RikA0A0B4J1N1 112 aa13□□□□□ -0.33
Trim58-201ENSMUST00000075084 Ighv8-12A0A0G2JDE1 119 aa13□□□□□ -0.33
Trim58-201ENSMUST00000075084 Srrm2Q8BTI8 2703 aaKnown RBP13□□□□□ -0.33
Trim58-201ENSMUST00000075084 Igsf10Q3V1M1 2594 aa12.99□□□□□ -0.33
Trim58-201ENSMUST00000075084 Gm7257D3YX25 99 aa12.98□□□□□ -0.33
Trim58-201ENSMUST00000075084 CrygfQ9CXV3 174 aa12.98□□□□□ -0.33
Trim58-201ENSMUST00000075084 Igkv4-79A0A075B5L8 119 aa12.98□□□□□ -0.33
Trim58-201ENSMUST00000075084 Wfdc17Q5SSJ1 76 aa12.98□□□□□ -0.33
Trim58-201ENSMUST00000075084 Plac8l1Q08EJ0 177 aa12.97□□□□□ -0.33
Trim58-201ENSMUST00000075084 Trav13d-1A0A075B606 110 aa12.97□□□□□ -0.33
Trim58-201ENSMUST00000075084 CrygaP04345 174 aa12.97□□□□□ -0.33
Trim58-201ENSMUST00000075084 Spink13Q3UTS8 97 aa12.97□□□□□ -0.33
Trim58-201ENSMUST00000075084 Gm45213A0A0U1RNZ6 101 aa12.96□□□□□ -0.33
Trim58-201ENSMUST00000075084 Gm10542F6XDR3 90 aa12.96□□□□□ -0.33
Trim58-201ENSMUST00000075084 Ccl25O35903 144 aa12.96□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 60 ms