RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Tcrg-C1A0A075B5Z0 172 aa9.15□□□□□ -0.94
Rnf4-201ENSMUST00000030992 Igkv4-78A0A0A6YYE5 119 aa9.15□□□□□ -0.94
Rnf4-201ENSMUST00000030992 Mapk1ip1lQ8BH93 242 aa9.15□□□□□ -0.94
Rnf4-201ENSMUST00000030992 Defb26Q30KN7 186 aa9.14□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Eif4ebp1Q60876 117 aa9.14□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Gm9747Q810H1 104 aa9.14□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Gm9922Q8C3P1 144 aa9.14□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Cd164l2Q9D6W7 172 aa9.14□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Chd9Q8BYH8 2885 aa9.14□□□□□ -0.95
Rnf4-201ENSMUST00000030992 C920008G01RikA0A0B4J1N1 112 aa9.14□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Esp24A8R0V6 68 aa9.14□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Rpl24Q8BP67 157 aaKnown RBP9.14□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Cd99Q8VCN6 175 aa9.14□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Tac4Q99N14 128 aa9.14□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Trdv5A0A075B661 115 aa9.14□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Fxyd5P97808 178 aa9.13□□□□□ -0.95
Rnf4-201ENSMUST00000030992 FlnaQ8BTM8 2647 aaKnown RBP9.13□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Gm9887F6RFI0 207 aa9.13□□□□□ -0.95
Rnf4-201ENSMUST00000030992 PrlhG3UWC3 86 aa9.13□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Lect2O88803 151 aa9.13□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Mast4Q811L6 2618 aa9.13□□□□□ -0.95
Rnf4-201ENSMUST00000030992 P01811 117 aa9.12□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Defa3P28310 93 aa9.12□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Defa10P50708 93 aa9.12□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Defa15P50713 93 aa9.12□□□□□ -0.95
Rnf4-201ENSMUST00000030992 BC106179Q8C9L1 186 aa9.12□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Hrct1Q9D6B9 109 aa9.12□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Gm35549A0A0N4SUS7 141 aa9.12□□□□□ -0.95
Rnf4-201ENSMUST00000030992 NpwA0A1L1STR8 176 aa9.11□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Rbmy1bQ60990 380 aa9.11□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Gm10300Q8C8P7 189 aa9.11□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Il1f10Q8R459 152 aa9.11□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Morn5Q9DAI9 170 aa9.11□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Ly6gP35461 111 aa9.1□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Defa24Q5G865 93 aa9.1□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Morn3Q8C5T4 241 aa9.1□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Tmem238A9JSM3 176 aa9.1□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Gm933J3QPC1 141 aa9.1□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Phlda3Q9WV95 125 aa9.1□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Sap30O88574 220 aa9.1□□□□□ -0.95
Rnf4-201ENSMUST00000030992 CckP09240 115 aa9.1□□□□□ -0.95
Rnf4-201ENSMUST00000030992 NrepQ07475 68 aa9.09□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Krtap16-1A2A5X5 502 aa9.09□□□□□ -0.95
Rnf4-201ENSMUST00000030992 Fgf23Q9EPC2 251 aa9.09□□□□□ -0.95
Rnf4-201ENSMUST00000030992 P84751 237 aa9.08□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Helz2E9QAM5 2947 aaKnown RBP9.08□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Cfc1P97766 202 aa9.08□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Gm6793B2RXM2 351 aa9.07□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Dmbt1Q60997 2085 aa9.07□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Lyrm9Q3UN90 78 aa9.07□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Rif1Q6PR54 2419 aaKnown RBP9.07□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Ifitm10Q8BR26 201 aa9.06□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Chchd7Q8K2Q5 85 aa9.06□□□□□ -0.96
Rnf4-201ENSMUST00000030992 LbhQ9CX60 105 aa9.06□□□□□ -0.96
Rnf4-201ENSMUST00000030992 4930442H23RikQ9D5G7 103 aa9.06□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Gm7849D3YX03 116 aa9.06□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Atp6v0e2Q91XE7 81 aa9.06□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Trav4-3A0A0B4J1K1 110 aa9.06□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Gm45785A0A1B0GT05 94 aa9.06□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Rab37Q9JKM7 223 aa9.06□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Cby1Q9D1C2 127 aa9.05□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Trav13d-1A0A075B606 110 aa9.04□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Cox8cA6H666 72 aa9.04□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Rpl36aP83882 106 aaKnown RBP9.04□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Rmi2Q3UPE3 149 aa9.04□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Gm9936Q8C864 160 aa9.04□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Tmem101Q91VP7 257 aa9.04□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Nop10Q9CQS2 64 aa9.04□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Timm17bQ9Z0V7 172 aa9.04□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Gm20730A0A075B5J6 119 aa9.03□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Il19Q8CJ70 176 aa9.03□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Igkv4-79A0A075B5L8 119 aa9.03□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Sigmar1O55242 223 aa9.03□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Plac8l1Q08EJ0 177 aa9.03□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Gm12057A0A087WR21 115 aa9.02□□□□□ -0.96
Rnf4-201ENSMUST00000030992 P01729 129 aa9.02□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Rpl32-psP17932 135 aa9.02□□□□□ -0.96
Rnf4-201ENSMUST00000030992 Gm9767G3X930 207 aa9.02□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Tfpi2O35536 230 aa9.02□□□□□ -0.97
Rnf4-201ENSMUST00000030992 CrygaP04345 174 aa9.02□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Prelid3aQ8VE85 172 aa9.02□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Gpha2Q925Q5 128 aa9.02□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Trav4d-3A0A075B625 110 aa9.02□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Cdc42se2Q8BGH7 84 aa9.02□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Tnfrsf23Q9ER63 176 aa9.02□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Hspg2Q05793 3707 aaKnown RBP9.01□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Gm10542F6XDR3 90 aa9.01□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Rpl35aO55142 110 aa9.01□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Ly6c2P0CW03 131 aa9.01□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Igfn1Q3KNY0 2849 aa9□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Notch3Q61982 2318 aa9□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Gm9513B3GLJ6 99 aa9□□□□□ -0.97
Rnf4-201ENSMUST00000030992 P01823 113 aa9□□□□□ -0.97
Rnf4-201ENSMUST00000030992 4930432M17RikQ3V0W9 174 aa9□□□□□ -0.97
Rnf4-201ENSMUST00000030992 H1fxQ80ZM5 188 aa9□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Shisa2Q8QZV2 295 aa9□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Zc2hc1bQ9D534 172 aa9□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Myo9aQ8C170 2542 aa9□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Gm10135F6TEE5 83 aa9□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Erdr1J3QMM0 206 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 129.9 ms